RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	SPRR3	Q9UBC9	169 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	YLPM1	P49750	1951 aa	Known RBP	4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CCL21	O00585	134 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SLC25A16	P16260	332 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PDLIM4	P50479	330 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	LY6E	Q16553	131 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	MORN2	Q502X0	79 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TRBV6-6	A0A0A6YYG2	114 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997		F6UB75	175 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SH2D1A	O60880	128 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	UCN	P55089	124 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PDE6H	Q13956	83 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997		Q6ZWC4	215 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997		Q8N8P6	123 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	C1orf159	Q96HA4	380 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SPX	Q9BT56	116 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TNC	P24821	2201 aa		4.96	□□□□□ -1.62
HNRNPU-208	ENST00000475997	KIR2DL5B	A0A0G2JN68	375 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	KIR2DL5B	A0A0G2JPC4	375 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PMS2P5	A8MQ11	134 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	IGHV3-23	P01764	117 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	KLRD1	Q13241	179 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	KIR2DL5A	Q8N109	375 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SIGLEC8	Q9NYZ4	499 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	METRN	Q9UJH8	293 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	IGLC7	A0M8Q6	106 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SS18	Q15532	418 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	C2orf66	Q6UXQ4	117 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	IL17REL	Q6ZVW7	336 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TRPT1	Q86TN4	253 aa	Known RBP	4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TEX48	A0A1B0GUV7	120 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997		F8VRH5	84 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	RHOD	O00212	210 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CEACAM8	P31997	349 aa	Predicted RBP	4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	FOXF2	Q12947	444 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	FOXC1	Q12948	553 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ZNF726P1	Q15940	193 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	FAM104B	Q5XKR9	115 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SIGLEC15	Q6ZMC9	328 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	FAM231D	Q6ZW35	169 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	RCHY1	Q96PM5	261 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	RNF5	Q99942	180 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997		S4R3C0	116 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CRLF1	O75462	422 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	APOBEC3A	P31941	199 aa	Predicted RBP	4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	C12orf74	Q32Q52	190 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997		Q6ZPA2	131 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997		Q8NFD4	153 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	NEU4	Q8WWR8	484 aa	Predicted RBP	4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TRAV13-1	A0A0B4J241	112 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PAX8	Q06710	450 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	DUX4L9	Q6RFH8	374 aa	Predicted RBP	4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ZGRF1	Q86YA3	2104 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	C9orf106	Q8NAJ2	232 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997		V9GYY9	64 aa		4.95	□□□□□ -1.62
HNRNPU-208	ENST00000475997	LINC00473	A8K010	186 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ZNF883	P0CG24	379 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	HLA-DRB4	P13762	266 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	HTN3	P15516	51 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997		Q86TA4	180 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	HAPLN4	Q86UW8	402 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TEN1	Q86WV5	123 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	HLA-DRB4	X5D2U9	266 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CFC1B	P0CG36	223 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CFC1	P0CG37	223 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	LCNL1	Q6ZST4	164 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	C8orf86	Q6ZUL3	223 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	WDR86	Q86TI4	376 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	FAM216B	Q8N7L0	139 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	GLMP	Q8WWB7	406 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PRSS46	E5RG02	174 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	IGKV2D-40	P01614	121 aa	Predicted RBP	4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	C14orf178	Q8N769	122 aa	Predicted RBP	4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SRSF8	Q9BRL6	282 aa	Known RBP	4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TMEM133	Q9H2Q1	129 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	NDUFA12	Q9UI09	145 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CREBBP	Q92793	2442 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	IGHV3OR16-8	A0A075B7F1	116 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TRAV26-1	A0A087WT03	109 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997		A0A1B0GX51	115 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997		A0A1W2PPI3	338 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	SRRM4	A7MD48	611 aa	Known RBP	4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CCL25	O15444	150 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	MP68	P56378	58 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	COA6	Q5JTJ3	125 aa	Known RBP	4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	EXOC3-AS1	Q8N2X6	119 aa		4.94	□□□□□ -1.62
HNRNPU-208	ENST00000475997	PIEZO2	Q9H5I5	2752 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TECTA	O75443	2155 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997		A0A0B4J2C4	111 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	FXYD7	P58549	80 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	MCRIP2	Q9BUT9	160 aa	Known RBP	4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	CD59	P13987	128 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	AMTN	Q6UX39	209 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	BRK1	Q8WUW1	75 aa		4.93	□□□□□ -1.62
HNRNPU-208	ENST00000475997	TP53TG1	Q9Y2A0	90 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms