RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 SNURFLB1AK76 121 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 SLC25A5P05141 298 aaKnown RBP8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 ATP5G1P05496 136 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 OR10J4P0C629 311 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 ATP5G3P48201 142 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 TAS2R45P59539 299 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 ICAM4Q14773 271 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 KIR3DS1Q14943 382 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 KHDC3LQ587J8 217 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 TMEM88Q6PEY1 159 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 POM121L12Q8N7R1 296 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 C15orf53Q8NAA6 179 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 LINC00477Q96M19 166 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 PYGO2Q9BRQ0 406 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 MED28Q9H204 178 aa8.06□□□□□ -1.12
NUDCD3-206ENST00000475952 TRAV12-3A0A0B4J271 114 aa8.05□□□□□ -1.12
NUDCD3-206ENST00000475952 UBE2L3P68036 154 aaKnown RBP8.05□□□□□ -1.12
NUDCD3-206ENST00000475952 TMEM78Q5T7P6 136 aa8.05□□□□□ -1.12
NUDCD3-206ENST00000475952 FAM122CQ6P4D5 195 aa8.05□□□□□ -1.12
NUDCD3-206ENST00000475952 C9orf47Q6ZRZ4 202 aa8.05□□□□□ -1.12
NUDCD3-206ENST00000475952 RNF141Q8WVD5 230 aa8.05□□□□□ -1.12
NUDCD3-206ENST00000475952 FXYD5Q96DB9 178 aa8.05□□□□□ -1.12
NUDCD3-206ENST00000475952 PHYHIPLQ96FC7 376 aa8.05□□□□□ -1.12
NUDCD3-206ENST00000475952 NOP10Q9NPE3 64 aaKnown RBP8.05□□□□□ -1.12
NUDCD3-206ENST00000475952 C7orf71A4D174 169 aa8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 CBY3A6NI87 242 aa8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 KLLNB2CW77 178 aa8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 F5H768 121 aa8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 MED14OSP0DP75 135 aa8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 CSN1S1P47710 185 aa8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 ERCC8Q13216 396 aa8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 ZNF266Q14584 549 aa8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 FCN2Q15485 313 aa8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 ACOT6Q3I5F7 207 aaPredicted RBP8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 ZNF680Q8NEM1 530 aa8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 ASB13Q8WXK3 278 aa8.04□□□□□ -1.12
NUDCD3-206ENST00000475952 IGKV2-40A0A087WW87 121 aaPredicted RBP8.03□□□□□ -1.12
NUDCD3-206ENST00000475952 IGKV2D-40P01614 121 aaPredicted RBP8.03□□□□□ -1.12
NUDCD3-206ENST00000475952 GPX1P07203 203 aa8.03□□□□□ -1.12
NUDCD3-206ENST00000475952 NMBP08949 121 aa8.03□□□□□ -1.12
NUDCD3-206ENST00000475952 CRISP2P16562 243 aa8.03□□□□□ -1.12
NUDCD3-206ENST00000475952 RNF212Q495C1 297 aa8.03□□□□□ -1.12
NUDCD3-206ENST00000475952 LYPD1Q8N2G4 141 aa8.03□□□□□ -1.12
NUDCD3-206ENST00000475952 FAM19A4Q96LR4 140 aa8.03□□□□□ -1.12
NUDCD3-206ENST00000475952 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
NUDCD3-206ENST00000475952 AGPAT4-IT1Q9H0P7 198 aa8.03□□□□□ -1.12
NUDCD3-206ENST00000475952 Q9H3A6 140 aa8.03□□□□□ -1.12
NUDCD3-206ENST00000475952 A0A1W2PPV4 95 aa8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 RBAKDNA6NC62 111 aa8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 M6PRP20645 277 aa8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 RANP62826 216 aaKnown RBP8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 BTN1A1Q13410 526 aa8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 FAM74A1Q5RGS3 127 aa8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 PQLC2Q6ZP29 291 aa8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 EIF4E3Q8N5X7 224 aaKnown RBP8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 ZNF503Q96F45 646 aa8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 ATG101Q9BSB4 218 aa8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 WFDC1Q9HC57 220 aa8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 ZNF492Q9P255 531 aa8.02□□□□□ -1.13
NUDCD3-206ENST00000475952 TRBV7-9A0A0J9YWB2 115 aa8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 RGS13O14921 159 aa8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 GIPP09681 153 aaPredicted RBP8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 RNASE4P34096 147 aaKnown RBP8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 ZNF138P52744 262 aa8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 RAB2AP61019 212 aa8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 LINC00612Q8N6U2 182 aa8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 CMTM2Q8TAZ6 248 aa8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 RXFP4Q8TDU9 374 aa8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 AQP10Q96PS8 301 aa8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 VGLL1Q99990 258 aa8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 LINC00467Q9BRT7 94 aa8.01□□□□□ -1.13
NUDCD3-206ENST00000475952 GAGE12BA1L429 117 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 GAGE7O76087 117 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 NUDT3O95989 172 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 GAGE12FP0CL80 117 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 GAGE12GP0CL81 117 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 GAGE12IP0CL82 117 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 FAM3BP58499 235 aaPredicted RBP8□□□□□ -1.13
NUDCD3-206ENST00000475952 CD300CQ08708 224 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 DAZ2Q13117 558 aaKnown RBP8□□□□□ -1.13
NUDCD3-206ENST00000475952 ANXA2RQ3ZCQ2 193 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 ZFAND2AQ8N6M9 145 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 HSD17B11Q8NBQ5 300 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 INO80EQ8NBZ0 244 aaPredicted RBP8□□□□□ -1.13
NUDCD3-206ENST00000475952 OR10G4Q8NGN3 311 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 OR10G9Q8NGN4 311 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 OR10G7Q8NGN6 311 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 OR2G3Q8NGZ4 309 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 Q8TAT8 98 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 ARPC5LQ9BPX5 153 aa8□□□□□ -1.13
NUDCD3-206ENST00000475952 PSMG3Q9BT73 122 aaPredicted RBP8□□□□□ -1.13
NUDCD3-206ENST00000475952 DIRC3C9JPN6 131 aa7.99□□□□□ -1.13
NUDCD3-206ENST00000475952 ZNF324O75467 553 aaPredicted RBP7.99□□□□□ -1.13
NUDCD3-206ENST00000475952 CDC34P49427 236 aaPredicted RBP7.99□□□□□ -1.13
NUDCD3-206ENST00000475952 OR5I1Q13606 314 aa7.99□□□□□ -1.13
NUDCD3-206ENST00000475952 RGS21Q2M5E4 152 aa7.99□□□□□ -1.13
NUDCD3-206ENST00000475952 LGALS9BQ3B8N2 356 aa7.99□□□□□ -1.13
NUDCD3-206ENST00000475952 IBA57Q5T440 356 aaKnown RBP7.99□□□□□ -1.13
NUDCD3-206ENST00000475952 PRR9Q5T870 116 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms