RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 BTN1A1Q13410 526 aa7.42□□□□□ -1.22
CDRT1-205ENST00000475944 PDE6HQ13956 83 aa7.42□□□□□ -1.22
CDRT1-205ENST00000475944 IBA57Q5T440 356 aaKnown RBP7.42□□□□□ -1.22
CDRT1-205ENST00000475944 NFE4Q86UQ8 179 aa7.42□□□□□ -1.22
CDRT1-205ENST00000475944 ST6GAL2Q96JF0 529 aa7.42□□□□□ -1.22
CDRT1-205ENST00000475944 C20orf85Q9H1P6 137 aa7.42□□□□□ -1.22
CDRT1-205ENST00000475944 SLC39A9Q9NUM3 307 aa7.42□□□□□ -1.22
CDRT1-205ENST00000475944 PRO0255Q9UI72 69 aa7.42□□□□□ -1.22
CDRT1-205ENST00000475944 WDR83OSQ9Y284 106 aa7.42□□□□□ -1.22
CDRT1-205ENST00000475944 LSM5Q9Y4Y9 91 aaKnown RBP7.42□□□□□ -1.22
CDRT1-205ENST00000475944 UBE2L5PA0A1B0GUS4 154 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 CCSO14618 274 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 RGS13O14921 159 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 GPX1P07203 203 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 HIST1H1EP10412 219 aaKnown RBP7.41□□□□□ -1.22
CDRT1-205ENST00000475944 PVALBP20472 110 aaPredicted RBP7.41□□□□□ -1.22
CDRT1-205ENST00000475944 RNASE4P34096 147 aaKnown RBP7.41□□□□□ -1.22
CDRT1-205ENST00000475944 BAXQ07812 192 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 CD300CQ08708 224 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 VWC2Q2TAL6 325 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 FAM19A4Q96LR4 140 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 AAMDCQ9H7C9 122 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 TMEM14CQ9P0S9 112 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 KLF12Q9Y4X4 402 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 TIMM9Q9Y5J7 89 aa7.41□□□□□ -1.22
CDRT1-205ENST00000475944 TRAV9-2A0A087WT02 112 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 C5orf51A6NDU8 294 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 FAM24AA6NFZ4 105 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 FAM25EA8MYX2 175 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 NDUFB4O95168 129 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 IGHV3-53P01767 116 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 NMBP08949 121 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 CRISP2P16562 243 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 S100A11P31949 105 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 HBG1P69891 147 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 HBG2P69892 147 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 MRPL23Q16540 153 aaKnown RBP7.4□□□□□ -1.22
CDRT1-205ENST00000475944 TMEM78Q5T7P6 136 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 LYPD1Q8N2G4 141 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 CHAC2Q8WUX2 184 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 VGLL1Q99990 258 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 ARPC5LQ9BPX5 153 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 AGPAT4-IT1Q9H0P7 198 aa7.4□□□□□ -1.22
CDRT1-205ENST00000475944 K7EP13 123 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 IFNA5P01569 189 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 INAFM2P0DMQ5 153 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 PYYP10082 97 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 SULT1A1P50225 295 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 CRYBA4P53673 196 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 C9orf47Q6ZRZ4 202 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 NEGR1Q7Z3B1 354 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 STX12Q86Y82 276 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 EXOC3-AS1Q8N2X6 119 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 ZFAND2AQ8N6M9 145 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 BLNKQ8WV28 456 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 FRZBQ92765 325 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 SDHCQ99643 169 aaPredicted RBP7.39□□□□□ -1.23
CDRT1-205ENST00000475944 C11orf1Q9H5F2 150 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 LYRM2Q9NU23 88 aaPredicted RBP7.39□□□□□ -1.23
CDRT1-205ENST00000475944 MRPL16Q9NX20 251 aaKnown RBP7.39□□□□□ -1.23
CDRT1-205ENST00000475944 HHLA3Q9XRX5 114 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 LY96Q9Y6Y9 160 aa7.39□□□□□ -1.23
CDRT1-205ENST00000475944 IGHV1OR15-1A0A075B7D0 117 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 IGKV2-40A0A087WW87 121 aaPredicted RBP7.38□□□□□ -1.23
CDRT1-205ENST00000475944 IGKV2D-40P01614 121 aaPredicted RBP7.38□□□□□ -1.23
CDRT1-205ENST00000475944 IL7P13232 177 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 FGF7P21781 194 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 FUSP35637 526 aaKnown RBP eCLIP7.38□□□□□ -1.23
CDRT1-205ENST00000475944 XGP55808 180 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 ZNF415Q09FC8 603 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 ICAM4Q14773 271 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 ATP6V1FQ16864 119 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 LYPD5Q6UWN5 251 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 C2orf50Q96LR7 162 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 C8orf49Q96NF6 230 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 RBM38Q9H0Z9 239 aaKnown RBP7.38□□□□□ -1.23
CDRT1-205ENST00000475944 TP53TG3Q9ULZ0 132 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 TNFRSF18Q9Y5U5 241 aa7.38□□□□□ -1.23
CDRT1-205ENST00000475944 A0A087WTM6 91 aa7.37□□□□□ -1.23
CDRT1-205ENST00000475944 TRGV4A0A0C4DH28 118 aa7.37□□□□□ -1.23
CDRT1-205ENST00000475944 PRAF2O60831 178 aa7.37□□□□□ -1.23
CDRT1-205ENST00000475944 DNAH10OSP0CZ25 163 aa7.37□□□□□ -1.23
CDRT1-205ENST00000475944 EVI2AP22794 236 aa7.37□□□□□ -1.23
CDRT1-205ENST00000475944 S100A10P60903 97 aa7.37□□□□□ -1.23
CDRT1-205ENST00000475944 FHL2Q14192 279 aa7.37□□□□□ -1.23
CDRT1-205ENST00000475944 Q5VSD8 79 aa7.37□□□□□ -1.23
CDRT1-205ENST00000475944 FAM122CQ6P4D5 195 aa7.37□□□□□ -1.23
CDRT1-205ENST00000475944 TMEM252Q8N6L7 170 aa7.37□□□□□ -1.23
CDRT1-205ENST00000475944 MRPL32Q9BYC8 188 aaKnown RBP7.37□□□□□ -1.23
CDRT1-205ENST00000475944 GPN1Q9HCN4 374 aaPredicted RBP7.37□□□□□ -1.23
CDRT1-205ENST00000475944 ZNF492Q9P255 531 aa7.37□□□□□ -1.23
CDRT1-205ENST00000475944 TRBV7-9A0A0J9YWB2 115 aa7.36□□□□□ -1.23
CDRT1-205ENST00000475944 IGSF23A1L1A6 192 aa7.36□□□□□ -1.23
CDRT1-205ENST00000475944 E5RGE8 158 aa7.36□□□□□ -1.23
CDRT1-205ENST00000475944 LYRM1O43325 122 aa7.36□□□□□ -1.23
CDRT1-205ENST00000475944 TCRBP04435 133 aa7.36□□□□□ -1.23
CDRT1-205ENST00000475944 NBEAP1P0C6P0 100 aa7.36□□□□□ -1.23
CDRT1-205ENST00000475944 SRIP30626 198 aa7.36□□□□□ -1.23
CDRT1-205ENST00000475944 ZNF138P52744 262 aa7.36□□□□□ -1.23
CDRT1-205ENST00000475944 RAB32Q13637 225 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms