RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 MALP21145 153 aa8.83□□□□□ -1
HLA-DOB-208ENST00000475235 RPL27AP46776 148 aaKnown RBP8.83□□□□□ -1
HLA-DOB-208ENST00000475235 ZNF415Q09FC8 603 aa8.83□□□□□ -1
HLA-DOB-208ENST00000475235 DGAT2L7PQ6IED9 249 aa8.83□□□□□ -1
HLA-DOB-208ENST00000475235 ZNF818PQ6ZRF7 136 aa8.83□□□□□ -1
HLA-DOB-208ENST00000475235 MBD3L1Q8WWY6 194 aa8.83□□□□□ -1
HLA-DOB-208ENST00000475235 PRR25Q96S07 402 aa8.83□□□□□ -1
HLA-DOB-208ENST00000475235 MAP1LC3AQ9H492 121 aa8.83□□□□□ -1
HLA-DOB-208ENST00000475235 NPVFQ9HCQ7 196 aa8.83□□□□□ -1
HLA-DOB-208ENST00000475235 EDN2P20800 178 aa8.82□□□□□ -1
HLA-DOB-208ENST00000475235 H2BFSP57053 126 aa8.82□□□□□ -1
HLA-DOB-208ENST00000475235 C10orf55Q5SWW7 151 aa8.82□□□□□ -1
HLA-DOB-208ENST00000475235 C20orf173Q96LM9 149 aa8.82□□□□□ -1
HLA-DOB-208ENST00000475235 GPHA2Q96T91 129 aa8.82□□□□□ -1
HLA-DOB-208ENST00000475235 NIPSNAP3BQ9BS92 247 aa8.82□□□□□ -1
HLA-DOB-208ENST00000475235 PARLQ9H300 379 aa8.82□□□□□ -1
HLA-DOB-208ENST00000475235 ZNF257Q9Y2Q1 563 aa8.82□□□□□ -1
HLA-DOB-208ENST00000475235 LSM4Q9Y4Z0 139 aaKnown RBP8.82□□□□□ -1
HLA-DOB-208ENST00000475235 TRBV9A0A0B4J1U6 114 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 TEX22C9J3V5 150 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 C9JQL5 133 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 SEC11BP0C7V7 166 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 ELK1P19419 428 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 HINT1P49773 126 aaPredicted RBP8.81□□□□□ -1
HLA-DOB-208ENST00000475235 SEC11AP67812 179 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 ATP5G2Q06055 141 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 ADIRFQ15847 76 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 FAM106AQ4KMX7 169 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 SPATA45Q537H7 98 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 OR51H1Q8NH63 302 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 SMIM4Q8WVI0 70 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 TVP23CQ96ET8 276 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 SCRT1Q9BWW7 348 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 PAM16Q9Y3D7 125 aa8.81□□□□□ -1
HLA-DOB-208ENST00000475235 FAUP35544 74 aaKnown RBP8.8□□□□□ -1
HLA-DOB-208ENST00000475235 KLF5Q13887 457 aaPredicted RBP8.8□□□□□ -1
HLA-DOB-208ENST00000475235 PMCHL1Q16048 86 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 VWC2Q2TAL6 325 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 FFAR4Q5NUL3 377 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 Q6Q795 121 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 BAALCQ8WXS3 180 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 RPRMQ9NS64 109 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 K7EN84 100 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 PGLYRP1O75594 196 aaPredicted RBP8.8□□□□□ -1
HLA-DOB-208ENST00000475235 SFT2D2O95562 160 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 SPINK8P0C7L1 97 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 NHLRC4P0CG21 123 aaPredicted RBP8.8□□□□□ -1
HLA-DOB-208ENST00000475235 ERVK-16P61578 105 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 RPEL1Q2QD12 228 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 ACTL10Q5JWF8 245 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 VAX1Q5SQQ9 334 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 COMMD5Q9GZQ3 224 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 SMAD5-AS1Q9Y6J3 95 aa8.8□□□□□ -1
HLA-DOB-208ENST00000475235 DUXBA0A1W2PPF3 345 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 OR4C46A6NHA9 309 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 UPK2O00526 184 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 PRH1P02810 166 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 GP9P14770 177 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 G6PCP35575 357 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 SYNJ2BPP57105 145 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 C15orf32Q32M92 178 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 ADAMTSL5Q6ZMM2 481 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 FAM19A5Q7Z5A7 132 aaPredicted RBP8.79□□□□□ -1
HLA-DOB-208ENST00000475235 ZNF709Q8N972 641 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 GGTLC1Q9BX51 225 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 ST20Q9HBF5 79 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 PEMTQ9UBM1 199 aa8.79□□□□□ -1
HLA-DOB-208ENST00000475235 E7EUB6 86 aa8.78□□□□□ -1
HLA-DOB-208ENST00000475235 IGLV1-51P01701 117 aa8.78□□□□□ -1
HLA-DOB-208ENST00000475235 DEFA4P12838 97 aa8.78□□□□□ -1
HLA-DOB-208ENST00000475235 LINC00336Q6ZUF6 198 aa8.78□□□□□ -1
HLA-DOB-208ENST00000475235 AP1S3Q96PC3 154 aa8.78□□□□□ -1
HLA-DOB-208ENST00000475235 SIGLEC8Q9NYZ4 499 aa8.78□□□□□ -1
HLA-DOB-208ENST00000475235 FBXL7Q9UJT9 491 aa8.78□□□□□ -1
HLA-DOB-208ENST00000475235 DNAH9Q9NYC9 4486 aa8.77□□□□□ -1
HLA-DOB-208ENST00000475235 OR2T8A6NH00 312 aa8.77□□□□□ -1.01
HLA-DOB-208ENST00000475235 TRBV12-3P01733 135 aa8.77□□□□□ -1.01
HLA-DOB-208ENST00000475235 RPL12P30050 165 aaKnown RBP8.77□□□□□ -1.01
HLA-DOB-208ENST00000475235 HSPE1P61604 102 aaKnown RBP8.77□□□□□ -1.01
HLA-DOB-208ENST00000475235 KLK9Q2XQG4 91 aa8.77□□□□□ -1.01
HLA-DOB-208ENST00000475235 TMED6Q8WW62 240 aa8.77□□□□□ -1.01
HLA-DOB-208ENST00000475235 MRPL32Q9BYC8 188 aaKnown RBP8.77□□□□□ -1.01
HLA-DOB-208ENST00000475235 HEYLQ9NQ87 328 aaPredicted RBP8.77□□□□□ -1.01
HLA-DOB-208ENST00000475235 KLK9Q9UKQ9 250 aa8.77□□□□□ -1.01
HLA-DOB-208ENST00000475235 H3BRM9 83 aa8.76□□□□□ -1.01
HLA-DOB-208ENST00000475235 BMPR1BO00238 502 aa8.76□□□□□ -1.01
HLA-DOB-208ENST00000475235 LPAR6P43657 344 aa8.76□□□□□ -1.01
HLA-DOB-208ENST00000475235 CYCSP99999 105 aaKnown RBP8.76□□□□□ -1.01
HLA-DOB-208ENST00000475235 TIGITQ495A1 244 aa8.76□□□□□ -1.01
HLA-DOB-208ENST00000475235 OR2K2Q8NGT1 345 aa8.76□□□□□ -1.01
HLA-DOB-208ENST00000475235 EEF1AKMT3Q96AZ1 226 aa8.76□□□□□ -1.01
HLA-DOB-208ENST00000475235 FANCD2OSQ96PS1 177 aa8.76□□□□□ -1.01
HLA-DOB-208ENST00000475235 MLST8Q9BVC4 326 aa8.76□□□□□ -1.01
HLA-DOB-208ENST00000475235 CYTL1Q9NRR1 136 aa8.76□□□□□ -1.01
HLA-DOB-208ENST00000475235 LSM5Q9Y4Y9 91 aaKnown RBP8.76□□□□□ -1.01
HLA-DOB-208ENST00000475235 IGLV11-55A0A075B6I3 123 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 TRAV3A0A0B4J244 114 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 C9orf118A6NHY6 69 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 CGB1A6NKQ9 187 aa8.75□□□□□ -1.01
HLA-DOB-208ENST00000475235 NPIPB6E9PJ23 425 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms