RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 TIMM8BQ9Y5J9 83 aaPredicted RBP6.67□□□□□ -1.34
PDPN-204ENST00000475043 F5H768 121 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 M0R2N4 97 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 NDUFB4O95168 129 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 ATP5G1P05496 136 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 OR10J4P0C629 311 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 RPL12P30050 165 aaKnown RBP6.66□□□□□ -1.34
PDPN-204ENST00000475043 ATP5G3P48201 142 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 ERCC8Q13216 396 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 PDE6HQ13956 83 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 ICAM4Q14773 271 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 FAM122CQ6P4D5 195 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 ZNF493Q6ZR52 646 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 SCGB1C1Q8TD33 95 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 TMEM263Q8WUH6 116 aaKnown RBP6.66□□□□□ -1.34
PDPN-204ENST00000475043 MRPL53Q96EL3 112 aaKnown RBP6.66□□□□□ -1.34
PDPN-204ENST00000475043 ATP5SQ99766 215 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 OR51M1Q9H341 326 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 NOP10Q9NPE3 64 aaKnown RBP6.66□□□□□ -1.34
PDPN-204ENST00000475043 PRELID1Q9Y255 219 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 HSPB11Q9Y547 144 aa6.66□□□□□ -1.34
PDPN-204ENST00000475043 IGLV2-18A0A075B6J9 118 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 CBY3A6NI87 242 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 SNURFLB1AK76 121 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 OR7C2O60412 319 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 IFNA5P01569 189 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 NBEAP1P0C6P0 100 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 FFAR4Q5NUL3 377 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 C15orf53Q8NAA6 179 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 RNASE8Q8TDE3 154 aaKnown RBP6.65□□□□□ -1.34
PDPN-204ENST00000475043 FAM167A-AS1Q96KT0 104 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 LINC00477Q96M19 166 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 ODF3Q96PU9 254 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 PAXXQ9BUH6 204 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 MRPL32Q9BYC8 188 aaKnown RBP6.65□□□□□ -1.34
PDPN-204ENST00000475043 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 MBD2Q9UBB5 411 aa6.65□□□□□ -1.34
PDPN-204ENST00000475043 IGKV2-40A0A087WW87 121 aaPredicted RBP6.64□□□□□ -1.35
PDPN-204ENST00000475043 NUDT3O95989 172 aa6.64□□□□□ -1.35
PDPN-204ENST00000475043 IGKV2D-40P01614 121 aaPredicted RBP6.64□□□□□ -1.35
PDPN-204ENST00000475043 GPX1P07203 203 aa6.64□□□□□ -1.35
PDPN-204ENST00000475043 TMEM78Q5T7P6 136 aa6.64□□□□□ -1.35
PDPN-204ENST00000475043 RNF141Q8WVD5 230 aa6.64□□□□□ -1.35
PDPN-204ENST00000475043 FXYD5Q96DB9 178 aa6.64□□□□□ -1.35
PDPN-204ENST00000475043 PYGO2Q9BRQ0 406 aa6.64□□□□□ -1.35
PDPN-204ENST00000475043 ATG101Q9BSB4 218 aa6.64□□□□□ -1.35
PDPN-204ENST00000475043 AGPAT4-IT1Q9H0P7 198 aa6.64□□□□□ -1.35
PDPN-204ENST00000475043 FUT9Q9Y231 359 aa6.64□□□□□ -1.35
PDPN-204ENST00000475043 ALG5Q9Y673 324 aa6.64□□□□□ -1.35
PDPN-204ENST00000475043 KMT2AQ03164 3969 aa6.63□□□□□ -1.35
PDPN-204ENST00000475043 GAGE12BA1L429 117 aa6.63□□□□□ -1.35
PDPN-204ENST00000475043 C7orf71A4D174 169 aa6.63□□□□□ -1.35
PDPN-204ENST00000475043 GAGE7O76087 117 aa6.63□□□□□ -1.35
PDPN-204ENST00000475043 SLC25A5P05141 298 aaKnown RBP6.63□□□□□ -1.35
PDPN-204ENST00000475043 GAGE12FP0CL80 117 aa6.63□□□□□ -1.35
PDPN-204ENST00000475043 GAGE12GP0CL81 117 aa6.63□□□□□ -1.35
PDPN-204ENST00000475043 GAGE12IP0CL82 117 aa6.63□□□□□ -1.35
PDPN-204ENST00000475043 RNASE4P34096 147 aaKnown RBP6.63□□□□□ -1.35
PDPN-204ENST00000475043 RANP62826 216 aaKnown RBP6.63□□□□□ -1.35
PDPN-204ENST00000475043 UBE2L3P68036 154 aaKnown RBP6.63□□□□□ -1.35
PDPN-204ENST00000475043 BTN1A1Q13410 526 aa6.63□□□□□ -1.35
PDPN-204ENST00000475043 RNF212Q495C1 297 aa6.63□□□□□ -1.35
PDPN-204ENST00000475043 PHYHIPLQ96FC7 376 aa6.63□□□□□ -1.35
PDPN-204ENST00000475043 PTTG1O95997 202 aa6.62□□□□□ -1.35
PDPN-204ENST00000475043 CSN1S1P47710 185 aa6.62□□□□□ -1.35
PDPN-204ENST00000475043 TAS2R45P59539 299 aa6.62□□□□□ -1.35
PDPN-204ENST00000475043 CD300CQ08708 224 aa6.62□□□□□ -1.35
PDPN-204ENST00000475043 OR5I1Q13606 314 aa6.62□□□□□ -1.35
PDPN-204ENST00000475043 KHDC3LQ587J8 217 aa6.62□□□□□ -1.35
PDPN-204ENST00000475043 C9orf47Q6ZRZ4 202 aa6.62□□□□□ -1.35
PDPN-204ENST00000475043 VGLL1Q99990 258 aa6.62□□□□□ -1.35
PDPN-204ENST00000475043 A0A1W2PPV4 95 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 KLLNB2CW77 178 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 RGS13O14921 159 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 ZNF324O75467 553 aaPredicted RBP6.61□□□□□ -1.35
PDPN-204ENST00000475043 EIF3GO75821 320 aaKnown RBP eCLIP6.61□□□□□ -1.35
PDPN-204ENST00000475043 ZNF138P52744 262 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 LGALS9BQ3B8N2 356 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 LINC00336Q6ZUF6 198 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 EIF4E3Q8N5X7 224 aaKnown RBP6.61□□□□□ -1.35
PDPN-204ENST00000475043 ZNF680Q8NEM1 530 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 Q8TAT8 98 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 GNPNAT1Q96EK6 184 aaPredicted RBP6.61□□□□□ -1.35
PDPN-204ENST00000475043 ZNF503Q96F45 646 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 FAM19A4Q96LR4 140 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 HYLS1Q96M11 299 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 MED28Q9H204 178 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 Q9H3A6 140 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 WFDC1Q9HC57 220 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 GSN-AS1Q9NRJ2 163 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 ZNF492Q9P255 531 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 NACAE9PAV3 2078 aa6.61□□□□□ -1.35
PDPN-204ENST00000475043 FRAS1Q86XX4 4008 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 VPS13DQ5THJ4 4388 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 TRGV2A0A075B6R0 118 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 TRAV26-1A0A087WT03 109 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 A0A0J9YY99 117 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 NMBP08949 121 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 CRISP2P16562 243 aa6.6□□□□□ -1.35
PDPN-204ENST00000475043 CCL18P55774 89 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms