RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 STHQ8IWL8 128 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 TMEM75Q8N9X5 138 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 OR8A1Q8NGG7 326 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 ANAPC16Q96DE5 110 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 AURKAIP1Q9NWT8 199 aaPredicted RBP7.75□□□□□ -1.17
COL12A1-206ENST00000474564 ZFP30Q9Y2G7 519 aa7.75□□□□□ -1.17
COL12A1-206ENST00000474564 TRAV34A0A0B4J273 112 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 IZUMO1RA6ND01 250 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 ZNF705FA8MVS1 300 aaPredicted RBP7.74□□□□□ -1.17
COL12A1-206ENST00000474564 WIPF1O43516 503 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 CT45A10P0DMU9 189 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 ZNF138P52744 262 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 TMEM183BQ1AE95 376 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 BEAN1Q3B7T3 259 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 PRR27Q6MZM9 219 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 KCNIP4Q6PIL6 250 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 C9orf47Q6ZRZ4 202 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 PRNTQ86SH4 94 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 CBLN2Q8IUK8 224 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 OR4B1Q8NGF8 309 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 C2CD4CQ8TF44 421 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 DAZAP1Q96EP5 407 aaKnown RBP7.74□□□□□ -1.17
COL12A1-206ENST00000474564 CTDSP1Q9GZU7 261 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 TUBA4BQ9H853 241 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 MAP6D1Q9H9H5 199 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 LENEPQ9Y5L5 61 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 LY96Q9Y6Y9 160 aa7.74□□□□□ -1.17
COL12A1-206ENST00000474564 A0A087WWC5 75 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 TRBV6-1A0A0K0K1D8 114 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 PGPEP1LA6NFU8 196 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 HLA-DMBP28068 263 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 LEPP41159 167 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 ERVFC1-1P60608 527 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 RNF212Q495C1 297 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 OXLD1Q5BKU9 147 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 ACTL10Q5JWF8 245 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 LINC01551Q86U37 167 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 NHLRC2Q8NBF2 726 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 OR10G8Q8NGN5 311 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 SMIM12Q96EX1 92 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 SGK494Q96LW2 274 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 SAV1Q9H4B6 383 aaPredicted RBP7.73□□□□□ -1.17
COL12A1-206ENST00000474564 PSG8Q9UQ74 426 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 KLF12Q9Y4X4 402 aa7.73□□□□□ -1.17
COL12A1-206ENST00000474564 IGKV2-40A0A087WW87 121 aaPredicted RBP7.72□□□□□ -1.17
COL12A1-206ENST00000474564 TRBV7-9A0A0J9YWB2 115 aa7.72□□□□□ -1.17
COL12A1-206ENST00000474564 A0A0J9YX75 114 aa7.72□□□□□ -1.17
COL12A1-206ENST00000474564 IGKV2D-40P01614 121 aaPredicted RBP7.72□□□□□ -1.17
COL12A1-206ENST00000474564 AMBPP02760 352 aa7.72□□□□□ -1.17
COL12A1-206ENST00000474564 RPL19P84098 196 aaKnown RBP7.72□□□□□ -1.17
COL12A1-206ENST00000474564 Q86TA4 180 aa7.72□□□□□ -1.17
COL12A1-206ENST00000474564 OCC1Q8TAD7 63 aa7.72□□□□□ -1.17
COL12A1-206ENST00000474564 ISOC2Q96AB3 205 aa7.72□□□□□ -1.17
COL12A1-206ENST00000474564 SFRP2Q96HF1 295 aa7.72□□□□□ -1.17
COL12A1-206ENST00000474564 C20orf173Q96LM9 149 aa7.72□□□□□ -1.17
COL12A1-206ENST00000474564 ZNF705GA8MUZ8 300 aaPredicted RBP7.71□□□□□ -1.18
COL12A1-206ENST00000474564 NPIPB6E9PJ23 425 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 GATCO43716 136 aaKnown RBP7.71□□□□□ -1.18
COL12A1-206ENST00000474564 GPX1P07203 203 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 HLA-DRB4P13762 266 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 SMUG1Q53HV7 270 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 IBA57Q5T440 356 aaKnown RBP7.71□□□□□ -1.18
COL12A1-206ENST00000474564 APRG1Q8IVJ8 170 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 FAM24BQ8N5W8 94 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 LINC00479Q96M42 142 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 CLUHP3Q96NS8 147 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 ODF3Q96PU9 254 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 C1QTNF4Q9BXJ3 329 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 AGPAT4-IT1Q9H0P7 198 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 ZNF492Q9P255 531 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 TMA7Q9Y2S6 64 aaKnown RBP7.71□□□□□ -1.18
COL12A1-206ENST00000474564 URGCP-MRPS24S4R325 110 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 HLA-DRB4X5D2U9 266 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 NF1P21359 2839 aa7.71□□□□□ -1.18
COL12A1-206ENST00000474564 KNCNA6PVL3 124 aa7.7□□□□□ -1.18
COL12A1-206ENST00000474564 PRAC2D3DTV9 90 aa7.7□□□□□ -1.18
COL12A1-206ENST00000474564 IGKV3-20P01619 116 aa7.7□□□□□ -1.18
COL12A1-206ENST00000474564 CD7P09564 240 aa7.7□□□□□ -1.18
COL12A1-206ENST00000474564 ERCC8Q13216 396 aa7.7□□□□□ -1.18
COL12A1-206ENST00000474564 ODF3L2Q3SX64 289 aa7.7□□□□□ -1.18
COL12A1-206ENST00000474564 MORN3Q6PF18 240 aaPredicted RBP7.7□□□□□ -1.18
COL12A1-206ENST00000474564 TMEM183AQ8IXX5 376 aa7.7□□□□□ -1.18
COL12A1-206ENST00000474564 IGF2BP2-AS1Q96M15 143 aa7.7□□□□□ -1.18
COL12A1-206ENST00000474564 PRR25Q96S07 402 aa7.7□□□□□ -1.18
COL12A1-206ENST00000474564 ASCL2Q99929 193 aa7.7□□□□□ -1.18
COL12A1-206ENST00000474564 VGLL1Q99990 258 aa7.7□□□□□ -1.18
COL12A1-206ENST00000474564 ZFHX3Q15911 3703 aa7.69□□□□□ -1.18
COL12A1-206ENST00000474564 TRBV20OR9-2A0A075B6H5 130 aa7.69□□□□□ -1.18
COL12A1-206ENST00000474564 TRAV8-1A0A0A6YYK1 113 aa7.69□□□□□ -1.18
COL12A1-206ENST00000474564 CXorf65A6NEN9 183 aa7.69□□□□□ -1.18
COL12A1-206ENST00000474564 F6UB75 175 aa7.69□□□□□ -1.18
COL12A1-206ENST00000474564 H3BMM0 161 aa7.69□□□□□ -1.18
COL12A1-206ENST00000474564 LTAP01374 205 aa7.69□□□□□ -1.18
COL12A1-206ENST00000474564 P01737 135 aa7.69□□□□□ -1.18
COL12A1-206ENST00000474564 ZNF705DP0CH99 300 aaPredicted RBP7.69□□□□□ -1.18
COL12A1-206ENST00000474564 ZNF705BP0CI00 300 aaPredicted RBP7.69□□□□□ -1.18
COL12A1-206ENST00000474564 PRB4P10163 310 aaPredicted RBP7.69□□□□□ -1.18
COL12A1-206ENST00000474564 APOC4P55056 127 aa7.69□□□□□ -1.18
COL12A1-206ENST00000474564 EGFEM1PQ0D2K5 195 aa7.69□□□□□ -1.18
COL12A1-206ENST00000474564 OR5I1Q13606 314 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms