RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 FAM240BA0A1B0GVZ2 78 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 PLAC8L1A1L4L8 177 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 ZNF705GA8MUZ8 300 aaPredicted RBP4.9□□□□□ -1.63
VPS50-211ENST00000474412 C11orf94C9JXX5 98 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 FNDC10F2Z333 226 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 H3BQ15 152 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 BOLA2-SMG1P6H3BVE0 249 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 L7N2F9 121 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 GOSR2O14653 212 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 HYPMO75409 117 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 UPK1BO75841 260 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 CFDP00746 253 aaPredicted RBP4.9□□□□□ -1.63
VPS50-211ENST00000474412 RPL7P18124 248 aaKnown RBP4.9□□□□□ -1.63
VPS50-211ENST00000474412 BCAP31P51572 246 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 TAS2R30P59541 319 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 NUTF2P61970 127 aaKnown RBP4.9□□□□□ -1.63
VPS50-211ENST00000474412 ZNF846Q147U1 533 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 LRRC37A5PQ49AS3 106 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 GCSAMLQ5JQS6 135 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 LINC00305Q7Z4B0 112 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 NRARPQ7Z6K4 114 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 SMIM29Q86T20 159 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 ZNF546Q86UE3 836 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 OR8A1Q8NGG7 326 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 C2orf50Q96LR7 162 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 ZNF331Q9NQX6 463 aaPredicted RBP4.9□□□□□ -1.63
VPS50-211ENST00000474412 LYRM2Q9NU23 88 aaPredicted RBP4.9□□□□□ -1.63
VPS50-211ENST00000474412 OR5AC2Q9NZP5 309 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 WDR83OSQ9Y284 106 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 RFNGQ9Y644 331 aa4.9□□□□□ -1.63
VPS50-211ENST00000474412 USP17L23D6RBM5 183 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 COX7A2P2O60397 106 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 EIF3GO75821 320 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS50-211ENST00000474412 INSP01308 110 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 IGLC2P0DOY2 106 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 HTN3P15516 51 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 AZU1P20160 251 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 CAMLGP49069 296 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 SELENOTP62341 195 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 BAXQ07812 192 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 FCN2Q15485 313 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 VWC2Q2TAL6 325 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 SPATA31B1PQ5VZV4 182 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 TMEM252Q8N6L7 170 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 ENKURQ8TC29 256 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 IGF2BP2-AS1Q96M15 143 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 GPR82Q96P67 336 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 PTTG2Q9NZH5 202 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 GOLT1BQ9Y3E0 138 aa4.89□□□□□ -1.63
VPS50-211ENST00000474412 J3KRW8 73 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 M0R3E3 92 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 HBE1P02100 147 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 PYYP10082 97 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 FGF7P21781 194 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 SULT1A1P50225 295 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 H2BFSP57053 126 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 PSG3Q16557 428 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 RRN3P1Q2M238 152 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 C10orf113Q5VZT2 155 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 LCN15Q6UWW0 184 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 THAP6Q8TBB0 222 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 S100ZQ8WXG8 99 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 RPUSD4Q96CM3 377 aaKnown RBP4.88□□□□□ -1.63
VPS50-211ENST00000474412 NIPSNAP3BQ9BS92 247 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 TMEM208Q9BTX3 173 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 RNF126Q9BV68 326 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 GPN1Q9HCN4 374 aaPredicted RBP4.88□□□□□ -1.63
VPS50-211ENST00000474412 UQCC1Q9NVA1 299 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 ZNF586Q9NXT0 402 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 PXMP4Q9Y6I8 212 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 MUC4Q99102 2169 aa4.88□□□□□ -1.63
VPS50-211ENST00000474412 DUSP14O95147 198 aaKnown RBP4.87□□□□□ -1.63
VPS50-211ENST00000474412 SPART-AS1P0CW21 52 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 B2MP61769 119 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 RHOBP62745 196 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 CLINT1Q14677 625 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 SAMD13Q5VXD3 122 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 MZT2BQ6NZ67 158 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 BPIFA4PQ86YQ2 179 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 OR5C1Q8NGR4 320 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 SAT2Q96F10 170 aaPredicted RBP4.87□□□□□ -1.63
VPS50-211ENST00000474412 SLC50A1Q9BRV3 221 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 GGACTQ9BVM4 153 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 SLC25A2Q9BXI2 301 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 NPCDR1Q9BY65 106 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 SLC39A9Q9NUM3 307 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 HECTD4Q9Y4D8 3996 aa4.87□□□□□ -1.63
VPS50-211ENST00000474412 FAT2Q9NYQ8 4349 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 IGLV2-18A0A075B6J9 118 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 TMEM189A5PLL7 270 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 SMIM9A6NGZ8 99 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 PRSS47A8MTI9 375 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 INMT-MINDY4F8WBC2 141 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 M0R2N4 97 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 CXCL2P19875 107 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 PVALBP20472 110 aaPredicted RBP4.86□□□□□ -1.63
VPS50-211ENST00000474412 RPL29P47914 159 aaKnown RBP4.86□□□□□ -1.63
VPS50-211ENST00000474412 TCTAP57738 103 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 DAD1P61803 113 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 ERCC8Q13216 396 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms