RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 OR8A1Q8NGG7 326 aa7.71□□□□□ -1.18
PRPF38A-202ENST00000474048 LINC00477Q96M19 166 aa7.71□□□□□ -1.18
PRPF38A-202ENST00000474048 LY96Q9Y6Y9 160 aa7.71□□□□□ -1.18
PRPF38A-202ENST00000474048 TRAV8-1A0A0A6YYK1 113 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 TRBV6-1A0A0K0K1D8 114 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 MT-ND4LP03901 98 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 ADCYAP1P18509 176 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 TSPOP30536 169 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 LEPP41159 167 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 RHEBQ15382 184 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 STHQ8IWL8 128 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 NHLRC2Q8NBF2 726 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 C20orf173Q96LM9 149 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 LINC00479Q96M42 142 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 MAP6D1Q9H9H5 199 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 KLF12Q9Y4X4 402 aa7.7□□□□□ -1.18
PRPF38A-202ENST00000474048 IZUMO1RA6ND01 250 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 NPIPB6E9PJ23 425 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 PPP1R2P9O14990 202 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 LTAP01374 205 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 IGLL1P15814 213 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 ERVFC1-1P60608 527 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 NUTF2P61970 127 aaKnown RBP7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 ERCC8Q13216 396 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 SMUG1Q53HV7 270 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 ACTL10Q5JWF8 245 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 C10orf91Q5T1B1 145 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 C9orf47Q6ZRZ4 202 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 TMEM183AQ8IXX5 376 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 CLRN3Q8NCR9 226 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 Q8TAT8 98 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 VGLL1Q99990 258 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 SAV1Q9H4B6 383 aaPredicted RBP7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 SDF2L1Q9HCN8 221 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 RPS10P5Q9NQ39 176 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 LENEPQ9Y5L5 61 aa7.69□□□□□ -1.18
PRPF38A-202ENST00000474048 A0A0J9YX75 114 aa7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 PRAC2D3DTV9 90 aa7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 F6UB75 175 aa7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 IGKV3-20P01619 116 aa7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 GPX1P07203 203 aa7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 ZNF705DP0CH99 300 aaPredicted RBP7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 ZNF705BP0CI00 300 aaPredicted RBP7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 PRB4P10163 310 aaPredicted RBP7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 RPL23P62829 140 aaKnown RBP7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 IBA57Q5T440 356 aaKnown RBP7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 LINC01551Q86U37 167 aa7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 FAM24BQ8N5W8 94 aa7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 WFDC9Q8NEX5 89 aa7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 IGF2BP2-AS1Q96M15 143 aa7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 ZNF492Q9P255 531 aa7.68□□□□□ -1.18
PRPF38A-202ENST00000474048 XKRY2A2RUG3 117 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 PGPEP1LA6NFU8 196 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 H7BYZ3 331 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 J3KRW8 73 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 P01737 135 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 HLA-DRB4P13762 266 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 S100PP25815 95 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 FAM162BQ5T6X4 162 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 OCC1Q8TAD7 63 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 ANAPC16Q96DE5 110 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 SFRP2Q96HF1 295 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 PRR25Q96S07 402 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 ASCL2Q99929 193 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 FAM110AQ9BQ89 295 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 AGPAT4-IT1Q9H0P7 198 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 AURKAIP1Q9NWT8 199 aaPredicted RBP7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 ZNF256Q9Y2P7 627 aaPredicted RBP7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 HLA-DRB4X5D2U9 266 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 ATRQ13535 2644 aa7.67□□□□□ -1.18
PRPF38A-202ENST00000474048 TRBV20OR9-2A0A075B6H5 130 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 TRBV7-9A0A0J9YWB2 115 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 KNCNA6PVL3 124 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 ZNF705GA8MUZ8 300 aaPredicted RBP7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 GATCO43716 136 aaKnown RBP7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 GCGP01275 180 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 AMBPP02760 352 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 RPL19P84098 196 aaKnown RBP7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 OR5I1Q13606 314 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 KCNIP4Q6PIL6 250 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 APRG1Q8IVJ8 170 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 OR10G8Q8NGN5 311 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 ISOC2Q96AB3 205 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 ODF3Q96PU9 254 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 CTDSP1Q9GZU7 261 aa7.66□□□□□ -1.18
PRPF38A-202ENST00000474048 C7orf77A4D0Y5 90 aa7.65□□□□□ -1.18
PRPF38A-202ENST00000474048 IGLV2-11P01706 119 aa7.65□□□□□ -1.18
PRPF38A-202ENST00000474048 CDKN1BP46527 198 aa7.65□□□□□ -1.18
PRPF38A-202ENST00000474048 BEAN1Q3B7T3 259 aa7.65□□□□□ -1.18
PRPF38A-202ENST00000474048 ODF3L2Q3SX64 289 aa7.65□□□□□ -1.18
PRPF38A-202ENST00000474048 C8orf49Q96NF6 230 aa7.65□□□□□ -1.18
PRPF38A-202ENST00000474048 TUBA4BQ9H853 241 aa7.65□□□□□ -1.18
PRPF38A-202ENST00000474048 A0A087WWC5 75 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 TRAV21A0A0B4J279 112 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 FABP5P3A8MUU1 101 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 CD7P09564 240 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 RNASE4P34096 147 aaKnown RBP7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 DEFB1P60022 68 aa7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 RPS20P60866 119 aaKnown RBP7.64□□□□□ -1.19
PRPF38A-202ENST00000474048 RNF212Q495C1 297 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms