RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 GCHFRP30047 84 aa9.93□□□□□ -0.82
USF1-205ENST00000473969 C9orf47Q6ZRZ4 202 aa9.93□□□□□ -0.82
USF1-205ENST00000473969 STOML3Q8TAV4 291 aa9.93□□□□□ -0.82
USF1-205ENST00000473969 C20orf144Q9BQM9 153 aa9.93□□□□□ -0.82
USF1-205ENST00000473969 RPH3ALQ9UNE2 315 aa9.93□□□□□ -0.82
USF1-205ENST00000473969 KLK5Q9Y337 293 aaPredicted RBP9.93□□□□□ -0.82
USF1-205ENST00000473969 TEX48A0A1B0GUV7 120 aa9.92□□□□□ -0.82
USF1-205ENST00000473969 LOC102723971A0A1B0GUV8 181 aa9.92□□□□□ -0.82
USF1-205ENST00000473969 RBAKDNA6NC62 111 aa9.92□□□□□ -0.82
USF1-205ENST00000473969 SLC25A5P05141 298 aaKnown RBP9.92□□□□□ -0.82
USF1-205ENST00000473969 SEC11BP0C7V7 166 aa9.92□□□□□ -0.82
USF1-205ENST00000473969 SPART-AS1P0CW21 52 aa9.92□□□□□ -0.82
USF1-205ENST00000473969 TPT1P13693 172 aaKnown RBP9.92□□□□□ -0.82
USF1-205ENST00000473969 HTN1P15515 57 aa9.92□□□□□ -0.82
USF1-205ENST00000473969 NANOS2P60321 138 aaKnown RBP9.92□□□□□ -0.82
USF1-205ENST00000473969 CCDC28AQ8IWP9 274 aa9.92□□□□□ -0.82
USF1-205ENST00000473969 NIPSNAP3BQ9BS92 247 aa9.92□□□□□ -0.82
USF1-205ENST00000473969 AGPAT4-IT1Q9H0P7 198 aa9.92□□□□□ -0.82
USF1-205ENST00000473969 ZNF705GA8MUZ8 300 aaPredicted RBP9.91□□□□□ -0.82
USF1-205ENST00000473969 UMAD1C9J7I0 102 aa9.91□□□□□ -0.82
USF1-205ENST00000473969 DIRC3C9JPN6 131 aa9.91□□□□□ -0.82
USF1-205ENST00000473969 H7BYZ3 331 aa9.91□□□□□ -0.82
USF1-205ENST00000473969 C1QBP02746 253 aa9.91□□□□□ -0.82
USF1-205ENST00000473969 GPX1P07203 203 aa9.91□□□□□ -0.82
USF1-205ENST00000473969 ZNF138P52744 262 aa9.91□□□□□ -0.82
USF1-205ENST00000473969 TAS2R60P59551 318 aa9.91□□□□□ -0.82
USF1-205ENST00000473969 PHLDA1Q8WV24 401 aaPredicted RBP9.91□□□□□ -0.82
USF1-205ENST00000473969 VGLL1Q99990 258 aa9.91□□□□□ -0.82
USF1-205ENST00000473969 TRAV12-3A0A0B4J271 114 aa9.9□□□□□ -0.82
USF1-205ENST00000473969 K7EQM0 130 aa9.9□□□□□ -0.82
USF1-205ENST00000473969 GFI1BQ5VTD9 330 aa9.9□□□□□ -0.82
USF1-205ENST00000473969 EIF5AL1Q6IS14 154 aaKnown RBP9.9□□□□□ -0.82
USF1-205ENST00000473969 CEMP1Q6PRD7 247 aaPredicted RBP9.9□□□□□ -0.82
USF1-205ENST00000473969 ARL6IP6Q8N6S5 226 aa9.9□□□□□ -0.82
USF1-205ENST00000473969 ZNF492Q9P255 531 aa9.9□□□□□ -0.82
USF1-205ENST00000473969 SERTM2A0A1B0GWG4 89 aa9.89□□□□□ -0.83
USF1-205ENST00000473969 C7orf71A4D174 169 aa9.89□□□□□ -0.83
USF1-205ENST00000473969 MAP1LC3B2A6NCE7 125 aa9.89□□□□□ -0.83
USF1-205ENST00000473969 C11orf94C9JXX5 98 aa9.89□□□□□ -0.83
USF1-205ENST00000473969 NMBP08949 121 aa9.89□□□□□ -0.83
USF1-205ENST00000473969 RNASE4P34096 147 aaKnown RBP9.89□□□□□ -0.83
USF1-205ENST00000473969 FGF8P55075 233 aaPredicted RBP9.89□□□□□ -0.83
USF1-205ENST00000473969 SUMO1P63165 101 aaKnown RBP9.89□□□□□ -0.83
USF1-205ENST00000473969 GOLT1AQ6ZVE7 132 aa9.89□□□□□ -0.83
USF1-205ENST00000473969 C5orf17Q8NAS9 161 aa9.89□□□□□ -0.83
USF1-205ENST00000473969 SUN5Q8TC36 379 aa9.89□□□□□ -0.83
USF1-205ENST00000473969 MAP1LC3BQ9GZQ8 125 aa9.89□□□□□ -0.83
USF1-205ENST00000473969 YTHDF2Q9Y5A9 579 aaKnown RBP9.89□□□□□ -0.83
USF1-205ENST00000473969 TRBV7-9A0A0J9YWB2 115 aa9.88□□□□□ -0.83
USF1-205ENST00000473969 ZNF726P1Q15940 193 aa9.88□□□□□ -0.83
USF1-205ENST00000473969 LGALSLQ3ZCW2 172 aaPredicted RBP9.88□□□□□ -0.83
USF1-205ENST00000473969 ZFP69Q49AA0 526 aa9.88□□□□□ -0.83
USF1-205ENST00000473969 DPPA3Q6W0C5 159 aa9.88□□□□□ -0.83
USF1-205ENST00000473969 SSX7Q7RTT5 188 aa9.88□□□□□ -0.83
USF1-205ENST00000473969 FAM213BQ8TBF2 198 aa9.88□□□□□ -0.83
USF1-205ENST00000473969 C16orf74Q96GX8 76 aa9.88□□□□□ -0.83
USF1-205ENST00000473969 LENEPQ9Y5L5 61 aa9.88□□□□□ -0.83
USF1-205ENST00000473969 TRAV10A0A0B4J240 114 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 A0A1W2PRE2 83 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 IFNA7P01567 189 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 CRISP2P16562 243 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 GNG5P63218 68 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 KIR3DS1Q14943 382 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 FAM222AQ5U5X8 452 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 ZNF493Q6ZR52 646 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 Q8TAT8 98 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 TMED6Q8WW62 240 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 PYGO2Q9BRQ0 406 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 NDFIP1Q9BT67 221 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 NKX6-2Q9C056 277 aaPredicted RBP9.87□□□□□ -0.83
USF1-205ENST00000473969 TMPRSS5Q9H3S3 457 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 DKK2Q9UBU2 259 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 CELA1Q9UNI1 258 aa9.87□□□□□ -0.83
USF1-205ENST00000473969 KLLNB2CW77 178 aa9.86□□□□□ -0.83
USF1-205ENST00000473969 RGS13O14921 159 aa9.86□□□□□ -0.83
USF1-205ENST00000473969 UBE2G2P60604 165 aa9.86□□□□□ -0.83
USF1-205ENST00000473969 DAD1P61803 113 aa9.86□□□□□ -0.83
USF1-205ENST00000473969 BTN1A1Q13410 526 aa9.86□□□□□ -0.83
USF1-205ENST00000473969 Q6ZTC4 211 aa9.86□□□□□ -0.83
USF1-205ENST00000473969 SLC51BQ86UW2 128 aa9.86□□□□□ -0.83
USF1-205ENST00000473969 C2CD4CQ8TF44 421 aa9.86□□□□□ -0.83
USF1-205ENST00000473969 TMEM263Q8WUH6 116 aaKnown RBP9.86□□□□□ -0.83
USF1-205ENST00000473969 SFT2D1Q8WV19 159 aa9.86□□□□□ -0.83
USF1-205ENST00000473969 FAM19A4Q96LR4 140 aa9.86□□□□□ -0.83
USF1-205ENST00000473969 EPDR1Q9UM22 224 aa9.86□□□□□ -0.83
USF1-205ENST00000473969 CBY3A6NI87 242 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 LYRM9A8MSI8 78 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 SNURFLB1AK76 121 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 TCRAP04437 139 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 PRM2P04554 102 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 H2AFB1P0C5Y9 115 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 AZU1P20160 251 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 FHITP49789 147 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 RAB5CP51148 216 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 CD300CQ08708 224 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 C12orf74Q32Q52 190 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 ZNF767PQ75MW2 155 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 ZFAND2AQ8N6M9 145 aa9.85□□□□□ -0.83
USF1-205ENST00000473969 TIMM8BQ9Y5J9 83 aaPredicted RBP9.85□□□□□ -0.83
USF1-205ENST00000473969 DNAH7Q8WXX0 4024 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 218.4 ms