RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 C9orf85Q96MD7 179 aa3.99□□□□□ -1.77
TMEM39A-206ENST00000473684 PHPT1Q9NRX4 125 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-206ENST00000473684 LINC00527Q9UJ94 153 aa3.99□□□□□ -1.77
TMEM39A-206ENST00000473684 TRBV10-2A0A0K0K1G8 114 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 LOC389332A0A1B0GUA5 103 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 D6R8Y8 96 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 ATXN8Q156A1 80 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 RPS19BP1Q86WX3 136 aaKnown RBP3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 FGFBP3Q8TAT2 258 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 RTL8AQ9BWD3 113 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 TANC2Q9HCD6 1990 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 TRAV13-1A0A0B4J241 112 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 C17orf98A8MV24 154 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 OVOL3O00110 214 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 PFN2P35080 140 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 ZNF542PQ5EBM4 170 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 C1orf195Q5TG92 126 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 FAM104BQ5XKR9 115 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 LINC00322Q6ZN03 302 aaPredicted RBP3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 C2orf48Q96LS8 159 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 FOXC2Q99958 501 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 PAXXQ9BUH6 204 aa3.98□□□□□ -1.77
TMEM39A-206ENST00000473684 H3BT86 120 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 J3QQQ9 107 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 HSPB6O14558 160 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 MRPS12O15235 138 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 NBR2O15453 112 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 OXTP01178 125 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 ARMS2P0C7Q2 107 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 COX6A1P12074 109 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 CCL14Q16627 93 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 LINC01620Q4KN68 170 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 AAED1Q7RTV5 226 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 LINC00643Q86TS7 51 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 NABP1Q96AH0 204 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 SIRPDQ9H106 197 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 NXT2Q9NPJ8 142 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 KLF13Q9Y2Y9 288 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 TRBV6-1A0A0K0K1D8 114 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 TEX49A0A1B0GTD5 131 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 NDUFC2-KCTD14E9PQ53 114 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 LY6LH3BQJ8 138 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 ZFAND5O76080 213 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 BRWD1-AS2P59051 145 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 SRSF9Q13242 221 aaKnown RBP eCLIP3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 SUMO4Q6EEV6 95 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 LINC00336Q6ZUF6 198 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 PRIMA1Q86XR5 153 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 ZNF714Q96N38 554 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 SHANK2-AS3Q9BTD1 123 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 SLC25A39Q9BZJ4 359 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 AGPAT4-IT1Q9H0P7 198 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 PRO1854Q9UHT4 67 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 PKIGQ9Y2B9 76 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 TRAV40A0A0B4J280 105 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 COL8A2P25067 703 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 PSMB8P28062 276 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 SFTA2Q6UW10 78 aa3.97□□□□□ -1.77
TMEM39A-206ENST00000473684 hADV29S1A0JD25 119 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 LEPP41159 167 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 ERVK-16P61578 105 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 HIST1H4AP62805 103 aaKnown RBP3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 FAM27BQ5VT28 67 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 CEMP1Q6PRD7 247 aaPredicted RBP3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 ZNF497Q6ZNH5 498 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 MDP1Q86V88 176 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 FAM19A4Q96LR4 140 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 MRPL35Q9NZE8 188 aaKnown RBP3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 A0A0C4DFX4 3053 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 TRAV12-1A0A0B4J245 112 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 A8MZ25 164 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 IGKV3-11P04433 115 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 TFF2Q03403 129 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 C5orf38Q86SI9 138 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 TP53TG1Q9Y2A0 90 aa3.96□□□□□ -1.78
TMEM39A-206ENST00000473684 DYSFO75923 2080 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 CACNA1IQ9P0X4 2223 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 USP17L23D6RBM5 183 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 INS-IGF2F8WCM5 200 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 SLC25A16P16260 332 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 CKS2P33552 79 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 KRTAP10-2P60368 255 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 MRPL51Q4U2R6 128 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 HES3Q5TGS1 186 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 EXOC3-AS1Q8N2X6 119 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 Q8N8P6 123 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 FXYD5Q96DB9 178 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 DSCR8Q96T75 97 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 MYOFQ9NZM1 2061 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 CFC1BP0CG36 223 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 CFC1P0CG37 223 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 FKBP2P26885 142 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 CCL11P51671 97 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 CCL8P80075 99 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 C2orf82Q6UX34 121 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 SCGB1D4Q6XE38 83 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 Q86TA4 180 aa3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 SRSF12Q8WXF0 261 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-206ENST00000473684 METTL26Q96S19 204 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms