RNA–Protein interactions for RNA: ENST00000472856.1

SOX2-OT-205, SOX2 overlapping transcript, humanhuman

TSL 2

Gene SOX2-OT, Length 454 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-205ENST00000472856 KIF13AQ9H1H9 1805 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 MBD5Q9P267 1494 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 TRAV12-1A0A0B4J245 112 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 PNMA8CA0A1B0GUJ8 204 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 LOC100130705A0A1B0GUX0 176 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 E7EUB6 86 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 IGLV3-19P01714 112 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 RNASE2P10153 161 aaKnown RBP3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 ETV6P41212 452 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 ELOBQ15370 118 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 ARPINQ7Z6K5 226 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 CLECL1Q8IZS7 167 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 LINC00304Q8N9R0 145 aa3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 ZFHX2Q9C0A1 2572 aaPredicted RBP3.63□□□□□ -1.83
SOX2-OT-205ENST00000472856 SHROOM3Q8TF72 1996 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 MICAL3Q7RTP6 2002 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 TRBV20-1A0A075B6N2 111 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 LOC107984156A0A0G2JMH3 177 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 TCRBV4S1A1TA0A5B7 111 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 C9orf170A2RU37 121 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 PYYP10082 97 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 ARL17AQ8IVW1 177 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 ATOH7Q8N100 152 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 SFT2D1Q8WV19 159 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 CIB3Q96Q77 187 aaPredicted RBP3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 PDCD10Q9BUL8 212 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 USP54Q70EL1 1684 aa3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 MYH9P35579 1960 aaKnown RBP3.62□□□□□ -1.83
SOX2-OT-205ENST00000472856 RTEL1-TNFRSF6BF6WH68 1400 aa3.61□□□□□ -1.83
SOX2-OT-205ENST00000472856 NAIPQ13075 1403 aa3.61□□□□□ -1.83
SOX2-OT-205ENST00000472856 C3orf85A0A1B0GTC6 90 aa3.61□□□□□ -1.83
SOX2-OT-205ENST00000472856 C2orf70A6NJV1 201 aa3.61□□□□□ -1.83
SOX2-OT-205ENST00000472856 CD2P06729 351 aa3.61□□□□□ -1.83
SOX2-OT-205ENST00000472856 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
SOX2-OT-205ENST00000472856 CCSMST1Q4G0I0 132 aa3.61□□□□□ -1.83
SOX2-OT-205ENST00000472856 MEIG1Q5JSS6 88 aa3.61□□□□□ -1.83
SOX2-OT-205ENST00000472856 TRAV10A0A0B4J240 114 aa3.6□□□□□ -1.83
SOX2-OT-205ENST00000472856 CORTO00230 105 aa3.6□□□□□ -1.83
SOX2-OT-205ENST00000472856 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
SOX2-OT-205ENST00000472856 AKAIN1P0CW23 69 aa3.6□□□□□ -1.83
SOX2-OT-205ENST00000472856 FAM19A2Q8N3H0 131 aa3.6□□□□□ -1.83
SOX2-OT-205ENST00000472856 SPACA4Q8TDM5 124 aa3.6□□□□□ -1.83
SOX2-OT-205ENST00000472856 PSMF1Q92530 271 aa3.6□□□□□ -1.83
SOX2-OT-205ENST00000472856 C14orf144Q96I85 54 aa3.6□□□□□ -1.83
SOX2-OT-205ENST00000472856 SCN3BQ9NY72 215 aa3.6□□□□□ -1.83
SOX2-OT-205ENST00000472856 BCL9LQ86UU0 1499 aa3.6□□□□□ -1.83
SOX2-OT-205ENST00000472856 SCN3AQ9NY46 2000 aa3.6□□□□□ -1.83
SOX2-OT-205ENST00000472856 A0A087WSZ3 146 aa3.59□□□□□ -1.83
SOX2-OT-205ENST00000472856 YPEL1O60688 119 aa3.59□□□□□ -1.83
SOX2-OT-205ENST00000472856 P0C880 135 aa3.59□□□□□ -1.83
SOX2-OT-205ENST00000472856 SMIM6P0DI80 62 aa3.59□□□□□ -1.83
SOX2-OT-205ENST00000472856 KCNRGQ8N5I3 272 aa3.59□□□□□ -1.83
SOX2-OT-205ENST00000472856 Q96M85 177 aa3.59□□□□□ -1.83
SOX2-OT-205ENST00000472856 PSMG3Q9BT73 122 aaPredicted RBP3.59□□□□□ -1.83
SOX2-OT-205ENST00000472856 SAR1AQ9NR31 198 aa3.59□□□□□ -1.83
SOX2-OT-205ENST00000472856 KIAA1549Q9HCM3 1950 aa3.59□□□□□ -1.83
SOX2-OT-205ENST00000472856 COL4A2P08572 1712 aa3.58□□□□□ -1.84
SOX2-OT-205ENST00000472856 COL24A1Q17RW2 1714 aa3.58□□□□□ -1.84
SOX2-OT-205ENST00000472856 MPDZO75970 2070 aa3.58□□□□□ -1.84
SOX2-OT-205ENST00000472856 DIDO1Q9BTC0 2240 aaKnown RBP3.58□□□□□ -1.84
SOX2-OT-205ENST00000472856 TRGV4A0A0C4DH28 118 aa3.58□□□□□ -1.84
SOX2-OT-205ENST00000472856 IGHV1-24A0A0C4DH33 117 aa3.58□□□□□ -1.84
SOX2-OT-205ENST00000472856 SPAARA0A1B0GVQ0 90 aa3.58□□□□□ -1.84
SOX2-OT-205ENST00000472856 FGF7P21781 194 aa3.58□□□□□ -1.84
SOX2-OT-205ENST00000472856 C2orf82Q6UX34 121 aa3.58□□□□□ -1.84
SOX2-OT-205ENST00000472856 LINC00269Q8N2A0 174 aa3.58□□□□□ -1.84
SOX2-OT-205ENST00000472856 HELZP42694 1942 aaKnown RBP3.58□□□□□ -1.84
SOX2-OT-205ENST00000472856 PXDNLA1KZ92 1463 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 C20orf202A1L168 122 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 A6NN06 94 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 H3BRN7 92 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 EDF1O60869 148 aaKnown RBP3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 SNAPC5O75971 98 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 BRS3P32247 399 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 ASB16-AS1Q495Z4 193 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 Q6ZUT4 128 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 Q8N2B8 174 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 CCNB3Q8WWL7 1395 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 PP6455Q8WZ26 134 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 DPH3Q96FX2 82 aa3.57□□□□□ -1.84
SOX2-OT-205ENST00000472856 ATG2AQ2TAZ0 1938 aa3.56□□□□□ -1.84
SOX2-OT-205ENST00000472856 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.56□□□□□ -1.84
SOX2-OT-205ENST00000472856 MRC2Q9UBG0 1479 aa3.56□□□□□ -1.84
SOX2-OT-205ENST00000472856 TRAV14DV4A0A0A6YYC5 116 aa3.56□□□□□ -1.84
SOX2-OT-205ENST00000472856 ZNF736B4DX44 427 aaPredicted RBP3.56□□□□□ -1.84
SOX2-OT-205ENST00000472856 Q1T7F1 81 aa3.56□□□□□ -1.84
SOX2-OT-205ENST00000472856 SCIMPQ6UWF3 145 aa3.56□□□□□ -1.84
SOX2-OT-205ENST00000472856 CASC2Q6XLA1 102 aa3.56□□□□□ -1.84
SOX2-OT-205ENST00000472856 Q8TAT8 98 aa3.56□□□□□ -1.84
SOX2-OT-205ENST00000472856 MPC1Q9Y5U8 109 aa3.56□□□□□ -1.84
SOX2-OT-205ENST00000472856 M0R2P5 195 aa3.55□□□□□ -1.84
SOX2-OT-205ENST00000472856 IGKV1-17P01599 117 aa3.55□□□□□ -1.84
SOX2-OT-205ENST00000472856 CXCL8P10145 99 aa3.55□□□□□ -1.84
SOX2-OT-205ENST00000472856 RBP2P50120 134 aa3.55□□□□□ -1.84
SOX2-OT-205ENST00000472856 PDE6HQ13956 83 aa3.55□□□□□ -1.84
SOX2-OT-205ENST00000472856 HCP5Q6MZN7 132 aa3.55□□□□□ -1.84
SOX2-OT-205ENST00000472856 SNX29P2Q8IUI4 249 aa3.55□□□□□ -1.84
SOX2-OT-205ENST00000472856 SMIM7Q9BQ49 75 aa3.55□□□□□ -1.84
SOX2-OT-205ENST00000472856 CHCHD2Q9Y6H1 151 aaPredicted RBP3.55□□□□□ -1.84
SOX2-OT-205ENST00000472856 RP1P56715 2156 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms