RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 DMBT1Q9UGM3 2413 aaPredicted RBP2.42□□□□□ -2.02
XRN1-209ENST00000472625 VPS13BQ7Z7G8 4022 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 TRGV2A0A075B6R0 118 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 IGKV1D-37A0A075B6S9 117 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 ANKRD20A5PA0PJZ0 165 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 SMCO3A2RU48 225 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 ZNF705GA8MUZ8 300 aaPredicted RBP2.42□□□□□ -2.02
XRN1-209ENST00000472625 F6UB75 175 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 H3BRN7 92 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 K7EPK0 472 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 ZNF701M0R085 212 aaPredicted RBP2.42□□□□□ -2.02
XRN1-209ENST00000472625 SIVA1O15304 175 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 CRXO43186 299 aaPredicted RBP2.42□□□□□ -2.02
XRN1-209ENST00000472625 ZNF253O75346 499 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 OR5G3P0C626 314 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 LINC00869P0C866 280 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 HTN1P15515 57 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 CXCL3P19876 107 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 ANXA7P20073 488 aaKnown RBP2.42□□□□□ -2.02
XRN1-209ENST00000472625 TGFBR1P36897 503 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 PLP1P60201 277 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 DAZ2Q13117 558 aaKnown RBP2.42□□□□□ -2.02
XRN1-209ENST00000472625 PDE6HQ13956 83 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 PSG3Q16557 428 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 BAK1Q16611 211 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 Q6ZRG5 221 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 CYP2G1PQ6ZSU1 146 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 ACOT7LQ6ZUV0 252 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 SH2D6Q7Z4S9 175 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 LYZL2Q7Z4W2 148 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 BAP18Q8IXM2 172 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 OR4D10Q8NGI6 311 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 RAB2BQ8WUD1 216 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 PCNPQ8WW12 178 aaKnown RBP2.42□□□□□ -2.02
XRN1-209ENST00000472625 RPUSD4Q96CM3 377 aaKnown RBP2.42□□□□□ -2.02
XRN1-209ENST00000472625 MRPL53Q96EL3 112 aaKnown RBP2.42□□□□□ -2.02
XRN1-209ENST00000472625 DIRAS2Q96HU8 199 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 PFDN5Q99471 154 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 GGACTQ9BVM4 153 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 SCRT1Q9BWW7 348 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 SH3BGRL3Q9H299 93 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 NOP10Q9NPE3 64 aaKnown RBP2.42□□□□□ -2.02
XRN1-209ENST00000472625 ICOSQ9Y6W8 199 aa2.42□□□□□ -2.02
XRN1-209ENST00000472625 TRAV12-2A0A075B6T6 113 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 IGKV1OR2-108A0A075B7D4 117 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 TRAV5A0A0B4J249 113 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 hDV102S1A0JD36 115 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 PLAC8L1A1L4L8 177 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 PRSS47A8MTI9 375 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 GOSR2O14653 212 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 COX7A2P2O60397 106 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 TSC22D2O75157 780 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 PITX3O75364 302 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 GAGE7O76087 117 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 ORM1P02763 201 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 SLC25A5P05141 298 aaKnown RBP2.41□□□□□ -2.02
XRN1-209ENST00000472625 NMBP08949 121 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 GAGE12FP0CL80 117 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 GAGE12GP0CL81 117 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 GAGE12IP0CL82 117 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 INAFM2P0DMQ5 153 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 HIST1H1EP10412 219 aaKnown RBP2.41□□□□□ -2.02
XRN1-209ENST00000472625 IAPPP10997 89 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 EVI2AP22794 236 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 S100A5P33763 92 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 INPP1P49441 399 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 LINC00315P59091 139 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 TAS2R30P59541 319 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 VAMP2P63027 116 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 DLK1P80370 383 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 GAGE1Q13065 139 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 GAGE4Q13068 117 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 CTF1Q16619 201 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 CNPY1Q3B7I2 92 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 TDRG1Q3Y452 100 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 SPANXN5Q5MJ07 72 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 IBA57Q5T440 356 aaKnown RBP2.41□□□□□ -2.02
XRN1-209ENST00000472625 FAAP20Q6NZ36 180 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 LINC00305Q7Z4B0 112 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 TMED4Q7Z7H5 227 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 TOMM5Q8N4H5 51 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 C12orf45Q8N5I9 185 aaPredicted RBP2.41□□□□□ -2.02
XRN1-209ENST00000472625 RNF182Q8N6D2 247 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 LINC00612Q8N6U2 182 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 OR10P1Q8NGE3 313 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 OR1L4Q8NGR5 311 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 DYNC2LI1Q8TCX1 351 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 TXNDC17Q9BRA2 123 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 LINC00467Q9BRT7 94 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 MRPS26Q9BYN8 205 aaKnown RBP2.41□□□□□ -2.02
XRN1-209ENST00000472625 ARL6Q9H0F7 186 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 ARV1Q9H2C2 271 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 NPVFQ9HCQ7 196 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 ZNF331Q9NQX6 463 aaPredicted RBP2.41□□□□□ -2.02
XRN1-209ENST00000472625 KCNIP2Q9NS61 270 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 SLC39A9Q9NUM3 307 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 PRO0255Q9UI72 69 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 PRELID1Q9Y255 219 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 LY96Q9Y6Y9 160 aa2.41□□□□□ -2.02
XRN1-209ENST00000472625 TRAV8-2A0A0B4J237 113 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms