RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 DEFB135Q30KP9 77 aa10.68□□□□□ -0.7
SMARCD3-207ENST00000472103 ARL6IP6Q8N6S5 226 aa10.68□□□□□ -0.7
SMARCD3-207ENST00000472103 CSNK1G2-AS1Q8NCQ2 148 aa10.68□□□□□ -0.7
SMARCD3-207ENST00000472103 FAM19A4Q96LR4 140 aa10.68□□□□□ -0.7
SMARCD3-207ENST00000472103 LINC00479Q96M42 142 aa10.68□□□□□ -0.7
SMARCD3-207ENST00000472103 TM2D3Q9BRN9 247 aa10.68□□□□□ -0.7
SMARCD3-207ENST00000472103 ZNF492Q9P255 531 aa10.68□□□□□ -0.7
SMARCD3-207ENST00000472103 ARL2-SNX15V9GYD0 113 aa10.68□□□□□ -0.7
SMARCD3-207ENST00000472103 TRAV34A0A0B4J273 112 aa10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 RBAKDNA6NC62 111 aa10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 TEX46H3BTG2 121 aa10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 J3KRW8 73 aa10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 IGLV2-11P01706 119 aa10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 RBMY1A1P0DJD3 496 aaKnown RBP10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 RBMY1CP0DJD4 496 aa10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 RBMY1FQ15415 496 aaKnown RBP10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 TVP23CQ96ET8 276 aa10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 LINC00477Q96M19 166 aa10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 RARRES2Q99969 163 aa10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 OVOL2Q9BRP0 275 aa10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 MANBALQ9NQG1 85 aa10.67□□□□□ -0.7
SMARCD3-207ENST00000472103 LOC102723971A0A1B0GUV8 181 aa10.66□□□□□ -0.7
SMARCD3-207ENST00000472103 SCO2A0A1W2PP80 73 aa10.66□□□□□ -0.7
SMARCD3-207ENST00000472103 C11orf94C9JXX5 98 aa10.66□□□□□ -0.7
SMARCD3-207ENST00000472103 PEX7O00628 323 aa10.66□□□□□ -0.7
SMARCD3-207ENST00000472103 UBE2CO00762 179 aa10.66□□□□□ -0.7
SMARCD3-207ENST00000472103 PPT1P50897 306 aa10.66□□□□□ -0.7
SMARCD3-207ENST00000472103 PMS2P11Q13670 270 aa10.66□□□□□ -0.7
SMARCD3-207ENST00000472103 PRR9Q5T870 116 aa10.66□□□□□ -0.7
SMARCD3-207ENST00000472103 C1orf158Q8N1D5 194 aa10.66□□□□□ -0.7
SMARCD3-207ENST00000472103 ATG101Q9BSB4 218 aa10.66□□□□□ -0.7
SMARCD3-207ENST00000472103 BCL2P10415 239 aa10.65□□□□□ -0.7
SMARCD3-207ENST00000472103 ZNF138P52744 262 aa10.65□□□□□ -0.7
SMARCD3-207ENST00000472103 TMEM78Q5T7P6 136 aa10.65□□□□□ -0.7
SMARCD3-207ENST00000472103 Q6ZQT7 251 aa10.65□□□□□ -0.7
SMARCD3-207ENST00000472103 ZFAND2AQ8N6M9 145 aa10.65□□□□□ -0.7
SMARCD3-207ENST00000472103 CYB561D1Q8N8Q1 229 aa10.65□□□□□ -0.7
SMARCD3-207ENST00000472103 RNF183Q96D59 192 aa10.65□□□□□ -0.7
SMARCD3-207ENST00000472103 ODF3Q96PU9 254 aa10.65□□□□□ -0.7
SMARCD3-207ENST00000472103 NKX6-2Q9C056 277 aaPredicted RBP10.65□□□□□ -0.7
SMARCD3-207ENST00000472103 PPP1R14DQ9NXH3 145 aa10.65□□□□□ -0.7
SMARCD3-207ENST00000472103 PSG8Q9UQ74 426 aa10.65□□□□□ -0.7
SMARCD3-207ENST00000472103 HUWE1Q7Z6Z7 4374 aaKnown RBP10.64□□□□□ -0.71
SMARCD3-207ENST00000472103 CDKN1BP46527 198 aa10.64□□□□□ -0.71
SMARCD3-207ENST00000472103 NUTF2P61970 127 aaKnown RBP10.64□□□□□ -0.71
SMARCD3-207ENST00000472103 Q6ZWC4 215 aa10.64□□□□□ -0.71
SMARCD3-207ENST00000472103 C8orf49Q96NF6 230 aa10.64□□□□□ -0.71
SMARCD3-207ENST00000472103 SERTM2A0A1B0GWG4 89 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 KLLNB2CW77 178 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 SPRY2O43597 315 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 IFNA1P01562 189 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 PRM2P04554 102 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 CRISP2P16562 243 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 LEPP41159 167 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 FLI1Q01543 452 aaPredicted RBP10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 BTN1A1Q13410 526 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 GFI1BQ5VTD9 330 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 TMEM75Q8N9X5 138 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 C2CD4CQ8TF44 421 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 HIST1H2BAQ96A08 127 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 IGF2BP2-AS1Q96M15 143 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 RCHY1Q96PM5 261 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 SPATA25Q9BR10 227 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 X6R8D5 127 aa10.63□□□□□ -0.71
SMARCD3-207ENST00000472103 RBFOX3A6NFN3 312 aa10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 F6UZH7 168 aa10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 AMBPP02760 352 aa10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 AKR1C3P42330 323 aa10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 MEF2BQ02080 365 aaPredicted RBP10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 TOR2AQ5JU69 321 aa10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 ZNF506Q5JVG8 444 aa10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 ZNF767PQ75MW2 155 aa10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 PRNTQ86SH4 94 aa10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 C11orf52Q96A22 123 aa10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 C1QTNF4Q9BXJ3 329 aa10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 VAX2Q9UIW0 290 aa10.62□□□□□ -0.71
SMARCD3-207ENST00000472103 IGHV3OR16-12A0A075B7B8 117 aa10.61□□□□□ -0.71
SMARCD3-207ENST00000472103 ZNF705AQ6ZN79 300 aaPredicted RBP10.61□□□□□ -0.71
SMARCD3-207ENST00000472103 Q86TA4 180 aa10.61□□□□□ -0.71
SMARCD3-207ENST00000472103 FAM210AQ96ND0 272 aa10.61□□□□□ -0.71
SMARCD3-207ENST00000472103 DERL1Q9BUN8 251 aa10.61□□□□□ -0.71
SMARCD3-207ENST00000472103 TP53TG1Q9Y2A0 90 aa10.61□□□□□ -0.71
SMARCD3-207ENST00000472103 KLF12Q9Y4X4 402 aa10.61□□□□□ -0.71
SMARCD3-207ENST00000472103 TRAV12-3A0A0B4J271 114 aa10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 C7orf71A4D174 169 aa10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 K7EQM0 130 aa10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 INSP01308 110 aa10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 NHLRC4P0CG21 123 aaPredicted RBP10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 TSPOP30536 169 aa10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 RNASE4P34096 147 aaKnown RBP10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 ZNF80P51504 273 aaPredicted RBP10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 SRSF3P84103 164 aaKnown RBP10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 TMEM183BQ1AE95 376 aa10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 OR11H2Q8NH07 326 aa10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 TCEAL7Q9BRU2 100 aa10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 ZMAT4Q9H898 229 aa10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 LENEPQ9Y5L5 61 aa10.6□□□□□ -0.71
SMARCD3-207ENST00000472103 TRBV7-9A0A0J9YWB2 115 aa10.59□□□□□ -0.71
SMARCD3-207ENST00000472103 ZNF324O75467 553 aaPredicted RBP10.59□□□□□ -0.71
SMARCD3-207ENST00000472103 GPX1P07203 203 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms