RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 A0A1W2PP18 115 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 FAM24AA6NFZ4 105 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 ZNF860A6NHJ4 632 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 OOSP1A8MZH6 123 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 H3BT86 120 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 TMEM256-PLSCR3K7ERE1 68 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 SYNGR2O43760 224 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 SOD1P00441 154 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 GYPBP06028 91 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 SLC25A4P12235 298 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 SLC25A6P12236 298 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 DAPP51397 102 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 POLR2JP52435 117 aaKnown RBP2.02□□□□□ -2.09
CD46-213ENST00000471987 TAS2R45P59539 299 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 RPL23P62829 140 aaKnown RBP2.02□□□□□ -2.09
CD46-213ENST00000471987 UBE2BP63146 152 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 HBBP68871 147 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 MRPS36P82909 103 aaKnown RBP2.02□□□□□ -2.09
CD46-213ENST00000471987 FOXF1Q12946 379 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 RBMY1FQ15415 496 aaKnown RBP2.02□□□□□ -2.09
CD46-213ENST00000471987 EBLN2Q6P2I7 272 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 DPPA3Q6W0C5 159 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 MORN4Q8NDC4 146 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 WFDC11Q8NEX6 87 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 OR5C1Q8NGR4 320 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 VSTM2AQ8TAG5 236 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 FAM57AQ8TBR7 257 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 S100A16Q96FQ6 103 aaKnown RBP2.02□□□□□ -2.09
CD46-213ENST00000471987 TIMM17AQ99595 171 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 PARP12Q9H0J9 701 aaKnown RBP2.02□□□□□ -2.09
CD46-213ENST00000471987 SLC35B3Q9H1N7 401 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 ST20Q9HBF5 79 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 ZNF286AQ9HBT8 521 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 BCL2L10Q9HD36 194 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 CACFD1Q9UGQ2 172 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 DOCK1Q14185 1865 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 RGPD1P0DJD0 1748 aa2.02□□□□□ -2.09
CD46-213ENST00000471987 MKI67P46013 3256 aaKnown RBP2.02□□□□□ -2.09
CD46-213ENST00000471987 COL1A1P02452 1464 aaPredicted RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 ANKRD50Q9ULJ7 1429 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 RGPD2P0DJD1 1756 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 KDM3BQ7LBC6 1761 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 A0A0D9SEW6 157 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 MUC21A0A0G2JKD1 596 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 A0A1B0GW54 56 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 HMSDA8MTL9 139 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 ZNF705FA8MVS1 300 aaPredicted RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 H3BRM9 83 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 M0R129 80 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 PLA2G10O15496 165 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 SSSCA1O60232 199 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 YPEL1O60688 119 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 HYPMO75409 117 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 PROSCO94903 275 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 LTAP01374 205 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 IGKV1-5P01602 117 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 CD3DP04234 171 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 SHBGP04278 402 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 HLA-DPB1P04440 258 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 SLC25A5P05141 298 aaKnown RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 CXCL1P09341 107 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 TRGC1P0CF51 173 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 ZNF705BP0CI00 300 aaPredicted RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 COX7CP15954 63 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 S100A4P26447 101 aaKnown RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 HLA-DMBP28068 263 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 HINT1P49773 126 aaPredicted RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 ZNF80P51504 273 aaPredicted RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 NPC2P61916 151 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 SNRPD3P62318 126 aaKnown RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 CCL20P78556 96 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 MARCH3Q86UD3 253 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 YPEL2Q96QA6 119 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 SLC25A2Q9BXI2 301 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 TXNL4BQ9NX01 149 aaKnown RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 ZNF492Q9P255 531 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 TP73-AS1Q9UF72 201 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 ZNF706Q9Y5V0 76 aaPredicted RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 ROBO1Q9Y6N7 1651 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 MYO18AQ92614 2054 aaKnown RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 GLI2P10070 1586 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 VWDEQ8N2E2 1590 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 LAMA2P24043 3122 aaKnown RBP2.01□□□□□ -2.09
CD46-213ENST00000471987 DLC1Q96QB1 1528 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 LRRC9Q6ZRR7 1453 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 BTAF1O14981 1849 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 PATJQ8NI35 1801 aa2.01□□□□□ -2.09
CD46-213ENST00000471987 RGPD8O14715 1765 aaPredicted RBP2□□□□□ -2.09
CD46-213ENST00000471987 RGPD5Q99666 1765 aa2□□□□□ -2.09
CD46-213ENST00000471987 ARFGEF2Q9Y6D5 1785 aa2□□□□□ -2.09
CD46-213ENST00000471987 IFT172Q9UG01 1749 aa2□□□□□ -2.09
CD46-213ENST00000471987 MROH2AA6NES4 1674 aa2□□□□□ -2.09
CD46-213ENST00000471987 EML6Q6ZMW3 1958 aa2□□□□□ -2.09
CD46-213ENST00000471987 MAST4O15021 2626 aa2□□□□□ -2.09
CD46-213ENST00000471987 LRP6O75581 1613 aa2□□□□□ -2.09
CD46-213ENST00000471987 MYO3AQ8NEV4 1616 aa2□□□□□ -2.09
CD46-213ENST00000471987 C19orf84I3L1E1 186 aa2□□□□□ -2.09
CD46-213ENST00000471987 PEX7O00628 323 aa2□□□□□ -2.09
CD46-213ENST00000471987 SIX6O95475 246 aa2□□□□□ -2.09
CD46-213ENST00000471987 IGLV2-23P01705 113 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms