RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 AGPAT2O15120 278 aa6.25□□□□□ -1.41
CPSF4-211ENST00000471455 ZNF253O75346 499 aa6.25□□□□□ -1.41
CPSF4-211ENST00000471455 SCGB1D2O95969 90 aa6.25□□□□□ -1.41
CPSF4-211ENST00000471455 IGLC2P0DOY2 106 aa6.25□□□□□ -1.41
CPSF4-211ENST00000471455 S100A5P33763 92 aa6.25□□□□□ -1.41
CPSF4-211ENST00000471455 PATE2Q6UY27 113 aa6.25□□□□□ -1.41
CPSF4-211ENST00000471455 Q6ZRG5 221 aa6.25□□□□□ -1.41
CPSF4-211ENST00000471455 EIF4E3Q8N5X7 224 aaKnown RBP6.25□□□□□ -1.41
CPSF4-211ENST00000471455 OR1L4Q8NGR5 311 aa6.25□□□□□ -1.41
CPSF4-211ENST00000471455 MRPL53Q96EL3 112 aaKnown RBP6.25□□□□□ -1.41
CPSF4-211ENST00000471455 VSIG2Q96IQ7 327 aa6.25□□□□□ -1.41
CPSF4-211ENST00000471455 PFDN5Q99471 154 aa6.25□□□□□ -1.41
CPSF4-211ENST00000471455 LINC00467Q9BRT7 94 aa6.25□□□□□ -1.41
CPSF4-211ENST00000471455 PARD6GQ9BYG4 376 aaPredicted RBP6.25□□□□□ -1.41
CPSF4-211ENST00000471455 SLIRPQ9GZT3 109 aaKnown RBP6.25□□□□□ -1.41
CPSF4-211ENST00000471455 C9orf170A2RU37 121 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 PRAC2D3DTV9 90 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 SLC17A3O00476 420 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 OR4E1P0C645 316 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 CT45A10P0DMU9 189 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 INPP1P49441 399 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 OPCMLQ14982 345 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 MRPL23Q16540 153 aaKnown RBP6.24□□□□□ -1.41
CPSF4-211ENST00000471455 ANXA2RQ3ZCQ2 193 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 IBA57Q5T440 356 aaKnown RBP6.24□□□□□ -1.41
CPSF4-211ENST00000471455 C12orf45Q8N5I9 185 aaPredicted RBP6.24□□□□□ -1.41
CPSF4-211ENST00000471455 ZNF431Q8TF32 576 aaPredicted RBP6.24□□□□□ -1.41
CPSF4-211ENST00000471455 ST6GAL2Q96JF0 529 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 ARPC5LQ9BPX5 153 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 GSN-AS1Q9NRJ2 163 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 PRO0255Q9UI72 69 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 PRELID1Q9Y255 219 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 LY96Q9Y6Y9 160 aa6.24□□□□□ -1.41
CPSF4-211ENST00000471455 A0A087WTM6 91 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 NAP1L6A6NFF2 107 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 H3BTX0 84 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 L7N2F9 121 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 SPINK4O60575 86 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 MPDU1O75352 247 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 ZNF324O75467 553 aaPredicted RBP6.23□□□□□ -1.41
CPSF4-211ENST00000471455 SNRPCP09234 159 aaKnown RBP6.23□□□□□ -1.41
CPSF4-211ENST00000471455 PRB4P10163 310 aaPredicted RBP6.23□□□□□ -1.41
CPSF4-211ENST00000471455 EVI2AP22794 236 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 CAMLGP49069 296 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 TCL1AP56279 114 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 VAMP2P63027 116 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 IAH1Q2TAA2 248 aaPredicted RBP6.23□□□□□ -1.41
CPSF4-211ENST00000471455 NEGR1Q7Z3B1 354 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 C10orf126Q8N4M7 172 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 C11orf72Q8NBR9 251 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 PCNPQ8WW12 178 aaKnown RBP6.23□□□□□ -1.41
CPSF4-211ENST00000471455 LINC00477Q96M19 166 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 DNAJC4Q9NNZ3 241 aa6.23□□□□□ -1.41
CPSF4-211ENST00000471455 LINC00854A0A1B0GVQ3 168 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 KLLNB2CW77 178 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 CCNKO75909 580 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 NDUFB6O95139 128 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 NMBP08949 121 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 HIST1H1EP10412 219 aaKnown RBP6.22□□□□□ -1.41
CPSF4-211ENST00000471455 SRIP30626 198 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 XGP55808 180 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 PDE6HQ13956 83 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 ZNF846Q147U1 533 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 TMEM37Q8WXS4 190 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 SAT2Q96F10 170 aaPredicted RBP6.22□□□□□ -1.41
CPSF4-211ENST00000471455 MGST2Q99735 147 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 VGLL1Q99990 258 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 AAMDCQ9H7C9 122 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 MSRB1Q9NZV6 116 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 GSKIPQ9P0R6 139 aa6.22□□□□□ -1.41
CPSF4-211ENST00000471455 FLG2Q5D862 2391 aaPredicted RBP6.22□□□□□ -1.41
CPSF4-211ENST00000471455 CENPXA8MT69 81 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 H3BMQ9 156 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 H3BQ15 152 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 GPX1P07203 203 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 GCSHP23434 173 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 RNASE4P34096 147 aaKnown RBP6.21□□□□□ -1.42
CPSF4-211ENST00000471455 ZNF415Q09FC8 603 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 SPANXN2Q5MJ10 180 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 TMEM78Q5T7P6 136 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 TRIQKQ629K1 86 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 LYPD5Q6UWN5 251 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 Q6ZSN1 163 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 NTN5Q8WTR8 489 aaPredicted RBP6.21□□□□□ -1.42
CPSF4-211ENST00000471455 C20orf85Q9H1P6 137 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 HHLA3Q9XRX5 114 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 RCL1Q9Y2P8 373 aaKnown RBP6.21□□□□□ -1.42
CPSF4-211ENST00000471455 TIMM9Q9Y5J7 89 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 V9GYH0 126 aa6.21□□□□□ -1.42
CPSF4-211ENST00000471455 TRBV19A0A075B6N1 114 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 TRGV4A0A0C4DH28 118 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 IGHV3-53P01767 116 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 ORM1P02763 201 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 DNAH10OSP0CZ25 163 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 CRISP2P16562 243 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 PVALBP20472 110 aaPredicted RBP6.2□□□□□ -1.42
CPSF4-211ENST00000471455 BCAP31P51572 246 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 CAV2P51636 162 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 CRYBA4P53673 196 aa6.2□□□□□ -1.42
CPSF4-211ENST00000471455 KRTAP10-1P60331 282 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms