RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ARPC1AQ92747 370 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 AQP10Q96PS8 301 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 CYTL1Q9NRR1 136 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 V9GYY9 64 aa3.34□□□□□ -1.87
CCDC39-202ENST00000471307 A0A1B0GW64 132 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 IGLC7A0M8Q6 106 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 FAM24AA6NFZ4 105 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 E7EUB6 86 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 CORTO00230 105 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 TAAR5O14804 337 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 ARPC5O15511 151 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 BRI3O95415 125 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 IFNA4P05014 189 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 S100A6P06703 90 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 RNASE2P10153 161 aaKnown RBP3.33□□□□□ -1.88
CCDC39-202ENST00000471307 HIST1H1BP16401 226 aaKnown RBP3.33□□□□□ -1.88
CCDC39-202ENST00000471307 NPY1RP25929 384 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 GPX4P36969 197 aaPredicted RBP3.33□□□□□ -1.88
CCDC39-202ENST00000471307 SULT1A1P50225 295 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 AP2S1P53680 142 aaPredicted RBP3.33□□□□□ -1.88
CCDC39-202ENST00000471307 BLCAPP62952 87 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 HBG1P69891 147 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 HBG2P69892 147 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 WT1-ASQ06250 92 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 RPEL1Q2QD12 228 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 KLK9Q2XQG4 91 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 LGALSLQ3ZCW2 172 aaPredicted RBP3.33□□□□□ -1.88
CCDC39-202ENST00000471307 SPINK9Q5DT21 86 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 C10orf55Q5SWW7 151 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 TMEM14EPQ6UXP3 125 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 SLC35E3Q7Z769 313 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 STX12Q86Y82 276 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 KCNRGQ8N5I3 272 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 LINC00469Q8N7U9 141 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 LFNGQ8NES3 379 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 OR10P1Q8NGE3 313 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 OR1P1Q8NH06 330 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 GRPEL2Q8TAA5 225 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 RNASEH2CQ8TDP1 164 aaKnown RBP3.33□□□□□ -1.88
CCDC39-202ENST00000471307 CACNG8Q8WXS5 425 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 HSPB9Q9BQS6 159 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 GGACTQ9BVM4 153 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 KLK9Q9UKQ9 250 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 HSPB11Q9Y547 144 aa3.33□□□□□ -1.88
CCDC39-202ENST00000471307 IGHV1OR15-1A0A075B7D0 117 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 TRAV41A0A0B4J266 112 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 IGSF23A1L1A6 192 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 FNDC10F2Z333 226 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 F6UB75 175 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 CST7O76096 145 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 CRYBA1P05813 215 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 METTL15P1P0C7V9 234 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 DEFA4P12838 97 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 CXCL2P19875 107 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 NKX2-5P52952 324 aaPredicted RBP3.32□□□□□ -1.88
CCDC39-202ENST00000471307 TAS2R60P59551 318 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 EIF5AP63241 154 aaKnown RBP3.32□□□□□ -1.88
CCDC39-202ENST00000471307 LAMTOR1Q6IAA8 161 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 UNQ5815/PRO19632Q6UWF5 114 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 Q8N2B8 174 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 STPG2Q8N412 459 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 C9orf62Q8N4C0 152 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 OR5C1Q8NGR4 320 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 NOL4LQ96MY1 436 aaPredicted RBP3.32□□□□□ -1.88
CCDC39-202ENST00000471307 OR4C12Q96R67 309 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 P2RX4Q99571 388 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 FAM103A1Q9BTL3 118 aaKnown RBP3.32□□□□□ -1.88
CCDC39-202ENST00000471307 MAP1LC3CQ9BXW4 147 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 ARL6Q9H0F7 186 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 PARP11Q9NR21 331 aa3.32□□□□□ -1.88
CCDC39-202ENST00000471307 PAIP2BQ9ULR5 123 aaKnown RBP3.32□□□□□ -1.88
CCDC39-202ENST00000471307 F11RQ9Y624 299 aaKnown RBP3.32□□□□□ -1.88
CCDC39-202ENST00000471307 ANK3Q12955 4377 aaKnown RBP3.32□□□□□ -1.88
CCDC39-202ENST00000471307 FN1P02751 2386 aaKnown RBP3.32□□□□□ -1.88
CCDC39-202ENST00000471307 IGLV11-55A0A075B6I3 123 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 BORCS7-ASMTA0A0B4J1R7 106 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 A0A1B0GW15 77 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 KANTRA0A1W2PQU2 76 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 RBMY1BA6NDE4 496 aaKnown RBP3.31□□□□□ -1.88
CCDC39-202ENST00000471307 RBMY1EA6NEQ0 496 aaKnown RBP3.31□□□□□ -1.88
CCDC39-202ENST00000471307 G3V318 75 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 SMKR1H3BMG3 65 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 H3BP45 60 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 H3BUA1 57 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 TCF21O43680 179 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 IFNA5P01569 189 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 REG1AP05451 166 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 RBMY1DP0C7P1 496 aaKnown RBP3.31□□□□□ -1.88
CCDC39-202ENST00000471307 RBMY1A1P0DJD3 496 aaKnown RBP3.31□□□□□ -1.88
CCDC39-202ENST00000471307 APELAP0DMC3 54 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 UBA52P62987 128 aaKnown RBP3.31□□□□□ -1.88
CCDC39-202ENST00000471307 SLC35B1P78383 322 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 SLC38A11Q08AI6 406 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 RAB31Q13636 194 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 ZNF266Q14584 549 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 SLC51BQ86UW2 128 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 UBAC2Q8NBM4 344 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 NECAP1Q8NC96 275 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 OR5T1Q8NG75 326 aa3.31□□□□□ -1.88
CCDC39-202ENST00000471307 OR1N2Q8NGR9 330 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms