RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 PSG3Q16557 428 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 TCTEX1D4Q5JR98 221 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 SAPCD1Q5SSQ6 148 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 LCN12Q6JVE5 192 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 KCNIP4Q6PIL6 250 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 GOLT1AQ6ZVE7 132 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 FAM231DQ6ZW35 169 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 TMEM183AQ8IXX5 376 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 C11orf44Q8N8P7 122 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 OR11H1Q8NG94 326 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 LINC00479Q96M42 142 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 PEMTQ9UBM1 199 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 RPH3ALQ9UNE2 315 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 PSG8Q9UQ74 426 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 TSSC4Q9Y5U2 329 aaPredicted RBP4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 PDZD2O15018 2839 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 CSPG4Q6UVK1 2322 aa4.61□□□□□ -1.67
SMNDC1-204ENST00000471297 ABCA12Q86UK0 2595 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 TMEM213A2RRL7 107 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 PGPEP1LA6NFU8 196 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 K7EN84 100 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 OVOL1O14753 267 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 PFN1P07737 140 aaKnown RBP4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 NPSP0C0P6 89 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 ID1P41134 155 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 SYNJ2BPP57105 145 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 RPL19P84098 196 aaKnown RBP4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 OR5I1Q13606 314 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 ELOBQ15370 118 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 Q71RC1 249 aaPredicted RBP4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 TCF24Q7RTU0 167 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 FAM24BQ8N5W8 94 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 KLHL30-AS1Q8NEE0 82 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 DAZAP1Q96EP5 407 aaKnown RBP4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 YPEL4Q96NS1 127 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 PRR25Q96S07 402 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 NRN1Q9NPD7 142 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 ZNF492Q9P255 531 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 MLXQ9UH92 298 aa4.6□□□□□ -1.67
SMNDC1-204ENST00000471297 TRBV24-1A0A075B6N3 115 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 TRAV9-1A0A075B6T8 112 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 TRAV8-2A0A0B4J237 113 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 C2orf70A6NJV1 201 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 ZNF705GA8MUZ8 300 aaPredicted RBP4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 M0R3E3 92 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 SOCS3O14543 225 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 GATCO43716 136 aaKnown RBP4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 IGLV2-11P01706 119 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 CD28P10747 220 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 FOLR2P14207 255 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 CBLN1P23435 193 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 PROK1P58294 105 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 SUMO2P61956 95 aaKnown RBP4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 PAFAH1B2P68402 229 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 FHL3Q13643 280 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 IBA57Q5T440 356 aaKnown RBP4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 C18orf65Q6ZTR6 163 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 COX8CQ7Z4L0 72 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 PRNTQ86SH4 94 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 Q86TA4 180 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 OR4B1Q8NGF8 309 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 LINC00477Q96M19 166 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 PYGO2Q9BRQ0 406 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 NDFIP1Q9BT67 221 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 PPP1R14DQ9NXH3 145 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 IL36BQ9NZH7 164 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 V9GYV3 84 aa4.59□□□□□ -1.67
SMNDC1-204ENST00000471297 CELSR2Q9HCU4 2923 aa4.59□□□□□ -1.68
SMNDC1-204ENST00000471297 TRAV2A0A0B4J234 112 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 C19orf71A6NCJ1 209 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 ZNF705FA8MVS1 300 aaPredicted RBP4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 C1orf196B1AJZ1 125 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 CCL24O00175 119 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 CT45A10P0DMU9 189 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 RAB5AP20339 215 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 HLA-DMBP28068 263 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 COX19Q49B96 90 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 C9orf47Q6ZRZ4 202 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 NDUFA11Q86Y39 141 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 GBGT1Q8N5D6 347 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 OR9G4Q8NGQ1 327 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 OR10J6PQ8NGY7 276 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 DLX4Q92988 240 aaPredicted RBP4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 FAM210BQ96KR6 192 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 SGK494Q96LW2 274 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 CITED2Q99967 270 aaPredicted RBP4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 RNASE7Q9H1E1 156 aaKnown RBP4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 LENEPQ9Y5L5 61 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 COX11Q9Y6N1 276 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 URGCP-MRPS24S4R325 110 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 CREBBPQ92793 2442 aa4.58□□□□□ -1.68
SMNDC1-204ENST00000471297 UNC79Q9P2D8 2635 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 IGKV2-40A0A087WW87 121 aaPredicted RBP4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 TRAV8-1A0A0A6YYK1 113 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 TGIF2-C20orf24A0A0A6YYL0 155 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 TRBV7-9A0A0J9YWB2 115 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 SMIM27A0A1W2PRY6 76 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 FAM231BA6NCW3 169 aa4.57□□□□□ -1.68
SMNDC1-204ENST00000471297 A8MWL6 223 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms