RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 ARHGAP5-AS1Q96IT6 56 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 C4orf36Q96KX1 117 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 PGLYRP3Q96LB9 341 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 C20orf144Q9BQM9 153 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 TMEM59Q9BXS4 323 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 PECRQ9BY49 303 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 TMEM222Q9H0R3 208 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 C20orf85Q9H1P6 137 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 SLC25A22Q9H936 323 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 CCL28Q9NRJ3 127 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 IMPAD1Q9NX62 359 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 CKLFQ9UBR5 152 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 WARS2Q9UGM6 360 aaKnown RBP1.05□□□□□ -2.24
CLIP4-209ENST00000471165 PRNDQ9UKY0 176 aa1.05□□□□□ -2.24
CLIP4-209ENST00000471165 IGKV1D-8A0A087WSZ0 117 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 A0A087WZ39 114 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 IGHV3-73A0A0B4J1V6 119 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 BBIP1A8MTZ0 92 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 TMEM262E9PQX1 116 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 RBFOX2O43251 390 aaKnown RBP eCLIP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 SLC22A5O76082 557 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 HLA-DQB1P01920 261 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 FCGR3AP08637 254 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 RNASE2P10153 161 aaKnown RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 PSMA1P25786 263 aaKnown RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 HLA-DMAP28067 261 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 RNASE4P34096 147 aaKnown RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 NUP62P37198 522 aaPredicted RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 LPAR6P43657 344 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 CBX5P45973 191 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 HSPA13P48723 471 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 MEOX2P50222 304 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 SUB1P53999 127 aaKnown RBP eCLIP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 YPEL3P61236 119 aaPredicted RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 HSPE1P61604 102 aaKnown RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 SUPT4H1P63272 117 aaKnown RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 BTN1A1Q13410 526 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 EIF4EBP1Q13541 118 aaPredicted RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 ELOBQ15370 118 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 POU2AF1Q16633 256 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 PCOTHQ58A44 107 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 HSP90B2PQ58FF3 399 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 COQ5Q5HYK3 327 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 C1orf194Q5T5A4 169 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 IDNKQ5T6J7 187 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 LINC00242Q5T6M2 205 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 STEAP1BQ6NZ63 245 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 PRSS54Q6PEW0 395 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 KCNIP4Q6PIL6 250 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 Q6Q795 121 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 CLPSL2Q6UWE3 100 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 ARPINQ7Z6K5 226 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 HS3ST5Q8IZT8 346 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 EIF4E3Q8N5X7 224 aaKnown RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 C15orf54Q8N8G6 183 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 SLC25A29Q8N8R3 303 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 OR10G4Q8NGN3 311 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 OR4A16Q8NH70 328 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 LRRC20Q8TCA0 184 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 ZNF431Q8TF32 576 aaPredicted RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 TRUB1Q8WWH5 349 aaKnown RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 RPUSD4Q96CM3 377 aaKnown RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 ACY3Q96HD9 319 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 C16orf45Q96MC5 204 aaPredicted RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 NSMCE2Q96MF7 247 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 PRADC1Q9BSG0 188 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 CENPOQ9BU64 300 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 SAMD10Q9BYL1 202 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 OCR1Q9BZK8 76 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 RPP21Q9H633 154 aaKnown RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 FKBP11Q9NYL4 201 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 CARHSP1Q9Y2V2 147 aaKnown RBP1.04□□□□□ -2.24
CLIP4-209ENST00000471165 TMEM56-RWDD3S4R434 201 aa1.04□□□□□ -2.24
CLIP4-209ENST00000471165 FLGP20930 4061 aaPredicted RBP1.03□□□□□ -2.24
CLIP4-209ENST00000471165 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 IGLV10-54A0A075B6I4 117 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 TRAV4A0A0B4J268 109 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 A0A0G2JND7 137 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 PNMA8CA0A1B0GUJ8 204 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 A0A1B0GVG6 124 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 LINC00854A0A1B0GVQ3 168 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 A0A1W2PNN7 141 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 C7orf71A4D174 169 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 GNGT2O14610 69 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 PAGE4O60829 102 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 MPDU1O75352 247 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 WBP4O75554 376 aaKnown RBP1.03□□□□□ -2.24
CLIP4-209ENST00000471165 EIF3GO75821 320 aaKnown RBP eCLIP1.03□□□□□ -2.24
CLIP4-209ENST00000471165 TNFAIP8O95379 198 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 FAM107AO95990 144 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 MT2AP02795 61 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 MT1FP04733 61 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 CDK1P06493 297 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 SNRPCP09234 159 aaKnown RBP1.03□□□□□ -2.24
CLIP4-209ENST00000471165 PTHLHP12272 177 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 CXCL3P19876 107 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 SPRR2EP22531 72 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 SPRR2BP35325 72 aa1.03□□□□□ -2.24
CLIP4-209ENST00000471165 SPRR2AP35326 72 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms