RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 FAM231BA6NCW3 169 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 INS-IGF2F8WCM5 200 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 TGOLN2O43493 480 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 PFDN1O60925 122 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 MED6O75586 246 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 C1QBP02746 253 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 RLN2P04090 185 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 LINC00869P0C866 280 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 IGLL1P15814 213 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 ATP6V0CP27449 155 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 HLA-DMBP28068 263 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 P2RY1P47900 373 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 SULT1A1P50225 295 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 RAB2AP61019 212 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 SLC35B1P78383 322 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 BAXQ07812 192 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 SCGB2A2Q13296 93 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 TOMM20LQ6UXN7 152 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 MIR17HGQ75NE6 70 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 FAM24BQ8N5W8 94 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 C3orf56Q8N813 242 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 OR1S2Q8NGQ3 325 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 C4orf3Q8WVX3 66 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 TMEM158Q8WZ71 300 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 EEF1AKMT3Q96AZ1 226 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 AQP10Q96PS8 301 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 PBDC1Q9BVG4 233 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 MFFQ9GZY8 342 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 WFDC10AQ9H1F0 79 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 UQCC1Q9NVA1 299 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 PEF1Q9UBV8 284 aaKnown RBP2.69□□□□□ -1.98
COL9A1-206ENST00000470652 TSSC4Q9Y5U2 329 aaPredicted RBP2.69□□□□□ -1.98
COL9A1-206ENST00000470652 PUS1Q9Y606 427 aaKnown RBP eCLIP2.69□□□□□ -1.98
COL9A1-206ENST00000470652 U3KQ87 197 aa2.69□□□□□ -1.98
COL9A1-206ENST00000470652 FAM223BA6NKX1 122 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 LINC01619G3V211 115 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 G3V4G9 280 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 AGPAT2O15120 278 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 NUPL2O15504 423 aaKnown RBP2.68□□□□□ -1.98
COL9A1-206ENST00000470652 GNG7O60262 68 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 IL4P05112 153 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 PYYP10082 97 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 ORM2P19652 201 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 PVALBP20472 110 aaPredicted RBP2.68□□□□□ -1.98
COL9A1-206ENST00000470652 TFPI2P48307 235 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 FGF8P55075 233 aaPredicted RBP2.68□□□□□ -1.98
COL9A1-206ENST00000470652 TAS2R30P59541 319 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 RAB11AP62491 216 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 IFITM2Q01629 132 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 ZNF616Q08AN1 781 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 ZNF726P1Q15940 193 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 KLK9Q2XQG4 91 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 CYP2G1PQ6ZSU1 146 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 NDUFA11Q86Y39 141 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 STX12Q86Y82 276 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 FAM223AQ8IWN6 122 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 KCNRGQ8N5I3 272 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 OR10P1Q8NGE3 313 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 OR4X1Q8NH49 305 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 RNASEH2CQ8TDP1 164 aaKnown RBP2.68□□□□□ -1.98
COL9A1-206ENST00000470652 SLC35E1Q96K37 410 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 UBE2E2Q96LR5 201 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 CIB3Q96Q77 187 aaPredicted RBP2.68□□□□□ -1.98
COL9A1-206ENST00000470652 ATP5SQ99766 215 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 NDUFAF3Q9BU61 184 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 TMEM147Q9BVK8 224 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 NPCDR1Q9BY65 106 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 WDR61Q9GZS3 305 aaKnown RBP2.68□□□□□ -1.98
COL9A1-206ENST00000470652 ARL6Q9H0F7 186 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 SLC25A22Q9H936 323 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 KLK9Q9UKQ9 250 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 PXMP4Q9Y6I8 212 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 NOTCH1P46531 2555 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 NBEAL1Q6ZS30 2694 aa2.68□□□□□ -1.98
COL9A1-206ENST00000470652 C2orf70A6NJV1 201 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 H3BUA1 57 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 SLC17A3O00476 420 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 GGCTO75223 188 aaKnown RBP2.67□□□□□ -1.98
COL9A1-206ENST00000470652 OR5G3P0C626 314 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 RD3LP0DJH9 198 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 HIST1H1BP16401 226 aaKnown RBP2.67□□□□□ -1.98
COL9A1-206ENST00000470652 GPX4P36969 197 aaPredicted RBP2.67□□□□□ -1.98
COL9A1-206ENST00000470652 CAMLGP49069 296 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 SUB1P53999 127 aaKnown RBP eCLIP2.67□□□□□ -1.98
COL9A1-206ENST00000470652 RPL32P62910 135 aaKnown RBP2.67□□□□□ -1.98
COL9A1-206ENST00000470652 CCL20P78556 96 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 RPEL1Q2QD12 228 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 ALKAL2Q6UX46 152 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 HSD17B13Q7Z5P4 300 aaPredicted RBP2.67□□□□□ -1.98
COL9A1-206ENST00000470652 TMEM144Q7Z5S9 345 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 GPHB5Q86YW7 130 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 INO80EQ8NBZ0 244 aaPredicted RBP2.67□□□□□ -1.98
COL9A1-206ENST00000470652 USMG5Q96IX5 58 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 RNF2Q99496 336 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 ZNF471Q9BX82 626 aaPredicted RBP2.67□□□□□ -1.98
COL9A1-206ENST00000470652 SLC25A2Q9BXI2 301 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 SLC25A31Q9H0C2 315 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 SLC39A9Q9NUM3 307 aa2.67□□□□□ -1.98
COL9A1-206ENST00000470652 TRBV7-1A0A0A6YYK4 115 aa2.66□□□□□ -1.98
COL9A1-206ENST00000470652 A0A0G2JLM5 398 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms