RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 ATRAIDQ6UW56 229 aa11.33□□□□□ -0.6
COL4A5-203ENST00000470339 COX8CQ7Z4L0 72 aa11.33□□□□□ -0.6
COL4A5-203ENST00000470339 PRNTQ86SH4 94 aa11.33□□□□□ -0.6
COL4A5-203ENST00000470339 WFDC9Q8NEX5 89 aa11.33□□□□□ -0.6
COL4A5-203ENST00000470339 OR10J6PQ8NGY7 276 aa11.33□□□□□ -0.6
COL4A5-203ENST00000470339 ISOC2Q96AB3 205 aa11.33□□□□□ -0.6
COL4A5-203ENST00000470339 LINC00477Q96M19 166 aa11.33□□□□□ -0.6
COL4A5-203ENST00000470339 VGLL1Q99990 258 aa11.33□□□□□ -0.6
COL4A5-203ENST00000470339 LENEPQ9Y5L5 61 aa11.33□□□□□ -0.6
COL4A5-203ENST00000470339 PGPEP1LA6NFU8 196 aa11.32□□□□□ -0.6
COL4A5-203ENST00000470339 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
COL4A5-203ENST00000470339 K7EN84 100 aa11.32□□□□□ -0.6
COL4A5-203ENST00000470339 CMC4P56277 68 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-203ENST00000470339 TMEM78Q5T7P6 136 aa11.32□□□□□ -0.6
COL4A5-203ENST00000470339 OR8A1Q8NGG7 326 aa11.32□□□□□ -0.6
COL4A5-203ENST00000470339 ANAPC16Q96DE5 110 aa11.32□□□□□ -0.6
COL4A5-203ENST00000470339 SGK494Q96LW2 274 aa11.32□□□□□ -0.6
COL4A5-203ENST00000470339 MCRIP2Q9BUT9 160 aaKnown RBP11.32□□□□□ -0.6
COL4A5-203ENST00000470339 CTDSP1Q9GZU7 261 aa11.32□□□□□ -0.6
COL4A5-203ENST00000470339 AGPAT4-IT1Q9H0P7 198 aa11.32□□□□□ -0.6
COL4A5-203ENST00000470339 TMEM242Q9NWH2 141 aa11.32□□□□□ -0.6
COL4A5-203ENST00000470339 ZNF256Q9Y2P7 627 aaPredicted RBP11.32□□□□□ -0.6
COL4A5-203ENST00000470339 SORL1Q92673 2214 aa11.32□□□□□ -0.6
COL4A5-203ENST00000470339 VWFP04275 2813 aa11.31□□□□□ -0.6
COL4A5-203ENST00000470339 TRBV7-9A0A0J9YWB2 115 aa11.31□□□□□ -0.6
COL4A5-203ENST00000470339 PPP1R2P9O14990 202 aa11.31□□□□□ -0.6
COL4A5-203ENST00000470339 ZNF688P0C7X2 276 aa11.31□□□□□ -0.6
COL4A5-203ENST00000470339 ZNF138P52744 262 aa11.31□□□□□ -0.6
COL4A5-203ENST00000470339 PSMG4Q5JS54 123 aa11.31□□□□□ -0.6
COL4A5-203ENST00000470339 C9orf66Q5T8R8 295 aa11.31□□□□□ -0.6
COL4A5-203ENST00000470339 FAM24BQ8N5W8 94 aa11.31□□□□□ -0.6
COL4A5-203ENST00000470339 PRR25Q96S07 402 aa11.31□□□□□ -0.6
COL4A5-203ENST00000470339 NDFIP1Q9BT67 221 aa11.31□□□□□ -0.6
COL4A5-203ENST00000470339 RPS10P5Q9NQ39 176 aa11.31□□□□□ -0.6
COL4A5-203ENST00000470339 ERCC8Q13216 396 aa11.3□□□□□ -0.6
COL4A5-203ENST00000470339 FAM231DQ6ZW35 169 aa11.3□□□□□ -0.6
COL4A5-203ENST00000470339 SFRP2Q96HF1 295 aa11.3□□□□□ -0.6
COL4A5-203ENST00000470339 OSTCQ9NRP0 149 aa11.3□□□□□ -0.6
COL4A5-203ENST00000470339 AURKAIP1Q9NWT8 199 aaPredicted RBP11.3□□□□□ -0.6
COL4A5-203ENST00000470339 ZNF492Q9P255 531 aa11.3□□□□□ -0.6
COL4A5-203ENST00000470339 IZUMO1RA6ND01 250 aa11.29□□□□□ -0.6
COL4A5-203ENST00000470339 DUSP14O95147 198 aaKnown RBP11.29□□□□□ -0.6
COL4A5-203ENST00000470339 MGST1P10620 155 aaKnown RBP11.29□□□□□ -0.6
COL4A5-203ENST00000470339 RNF212Q495C1 297 aa11.29□□□□□ -0.6
COL4A5-203ENST00000470339 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
COL4A5-203ENST00000470339 FOXI2Q6ZQN5 318 aa11.29□□□□□ -0.6
COL4A5-203ENST00000470339 FAM110AQ9BQ89 295 aa11.29□□□□□ -0.6
COL4A5-203ENST00000470339 A0A0J9YX75 114 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 CXorf65A6NEN9 183 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 CD33P20138 364 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 NHLRC2Q8NBF2 726 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 OR10G8Q8NGN5 311 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 ODF3Q96PU9 254 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 SAV1Q9H4B6 383 aaPredicted RBP11.28□□□□□ -0.6
COL4A5-203ENST00000470339 TUBA4BQ9H853 241 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 SMCO4Q9NRQ5 59 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 STAB1Q9NY15 2570 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 COL6A5A8TX70 2615 aa11.28□□□□□ -0.6
COL4A5-203ENST00000470339 CT45A10P0DMU9 189 aa11.27□□□□□ -0.61
COL4A5-203ENST00000470339 ERVFC1-1P60608 527 aa11.27□□□□□ -0.61
COL4A5-203ENST00000470339 HIST1H1AQ02539 215 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-203ENST00000470339 OR5I1Q13606 314 aa11.27□□□□□ -0.61
COL4A5-203ENST00000470339 SMUG1Q53HV7 270 aa11.27□□□□□ -0.61
COL4A5-203ENST00000470339 ZC2HC1AQ96GY0 325 aa11.27□□□□□ -0.61
COL4A5-203ENST00000470339 FAM19A4Q96LR4 140 aa11.27□□□□□ -0.61
COL4A5-203ENST00000470339 MAP6D1Q9H9H5 199 aa11.27□□□□□ -0.61
COL4A5-203ENST00000470339 C19orf71A6NCJ1 209 aa11.26□□□□□ -0.61
COL4A5-203ENST00000470339 A8MTW9 85 aa11.26□□□□□ -0.61
COL4A5-203ENST00000470339 H7BYZ3 331 aa11.26□□□□□ -0.61
COL4A5-203ENST00000470339 WIPF1O43516 503 aa11.26□□□□□ -0.61
COL4A5-203ENST00000470339 PRB4P10163 310 aaPredicted RBP11.26□□□□□ -0.61
COL4A5-203ENST00000470339 DEFB131AP59861 70 aa11.26□□□□□ -0.61
COL4A5-203ENST00000470339 IBA57Q5T440 356 aaKnown RBP11.26□□□□□ -0.61
COL4A5-203ENST00000470339 Q8TAT8 98 aa11.26□□□□□ -0.61
COL4A5-203ENST00000470339 CLUHP3Q96NS8 147 aa11.26□□□□□ -0.61
COL4A5-203ENST00000470339 IMMP2LQ96T52 175 aa11.26□□□□□ -0.61
COL4A5-203ENST00000470339 F6UB75 175 aa11.25□□□□□ -0.61
COL4A5-203ENST00000470339 SCO1O75880 301 aa11.25□□□□□ -0.61
COL4A5-203ENST00000470339 ZNF705DP0CH99 300 aaPredicted RBP11.25□□□□□ -0.61
COL4A5-203ENST00000470339 ZNF705BP0CI00 300 aaPredicted RBP11.25□□□□□ -0.61
COL4A5-203ENST00000470339 CRISP2P16562 243 aa11.25□□□□□ -0.61
COL4A5-203ENST00000470339 NUDT10Q8NFP7 164 aa11.25□□□□□ -0.61
COL4A5-203ENST00000470339 DAZAP1Q96EP5 407 aaKnown RBP11.25□□□□□ -0.61
COL4A5-203ENST00000470339 NUDT11Q96G61 164 aa11.25□□□□□ -0.61
COL4A5-203ENST00000470339 C8orf49Q96NF6 230 aa11.25□□□□□ -0.61
COL4A5-203ENST00000470339 ASCL2Q99929 193 aa11.25□□□□□ -0.61
COL4A5-203ENST00000470339 GPR61Q9BZJ8 451 aa11.25□□□□□ -0.61
COL4A5-203ENST00000470339 AGRNO00468 2067 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 OR11H12B2RN74 326 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 HLA-DRB4P13762 266 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 DEFB1P60022 68 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 BTN1A1Q13410 526 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 FAM162BQ5T6X4 162 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 GDF5OSQ5U4N7 250 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 PRR27Q6MZM9 219 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 OR4B1Q8NGF8 309 aa11.24□□□□□ -0.61
COL4A5-203ENST00000470339 RNASE7Q9H1E1 156 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms