RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 Q86TA4 180 aa10.92□□□□□ -0.66
GPC1-208ENST00000469694 OR4C13Q8NGP0 309 aa10.92□□□□□ -0.66
GPC1-208ENST00000469694 OSR1Q8TAX0 266 aaPredicted RBP10.92□□□□□ -0.66
GPC1-208ENST00000469694 PHLDA1Q8WV24 401 aaPredicted RBP10.92□□□□□ -0.66
GPC1-208ENST00000469694 ZNF414Q96IQ9 312 aa10.92□□□□□ -0.66
GPC1-208ENST00000469694 SIGLEC8Q9NYZ4 499 aa10.92□□□□□ -0.66
GPC1-208ENST00000469694 TRAV8-1A0A0A6YYK1 113 aa10.92□□□□□ -0.66
GPC1-208ENST00000469694 INS-IGF2F8WCM5 200 aa10.92□□□□□ -0.66
GPC1-208ENST00000469694 GCSHP23434 173 aa10.92□□□□□ -0.66
GPC1-208ENST00000469694 WFDC2Q14508 124 aa10.92□□□□□ -0.66
GPC1-208ENST00000469694 RUSC1-AS1Q66K80 236 aa10.92□□□□□ -0.66
GPC1-208ENST00000469694 LOC389332A0A1B0GUA5 103 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 ZNF785A8K8V0 405 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 BUB1B-PAK6H3BSN5 160 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 IGLV2-23P01705 113 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 ZFP36P26651 326 aaKnown RBP10.91□□□□□ -0.66
GPC1-208ENST00000469694 SRSF12Q8WXF0 261 aaKnown RBP10.91□□□□□ -0.66
GPC1-208ENST00000469694 A0A1B0GW15 77 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 H3BTX0 84 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 TCTEX1D4Q5JR98 221 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 POLQO75417 2590 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 TRAV26-1A0A087WT03 109 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 IGLV2-11P01706 119 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 CT45A10P0DMU9 189 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 GP9P14770 177 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 Q71RC1 249 aaPredicted RBP10.91□□□□□ -0.66
GPC1-208ENST00000469694 C8orf31Q8N9H6 132 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 SPAG8Q99932 426 aaPredicted RBP10.91□□□□□ -0.66
GPC1-208ENST00000469694 HIGD1BQ9P298 99 aa10.91□□□□□ -0.66
GPC1-208ENST00000469694 WT1-ASQ06250 92 aa10.9□□□□□ -0.66
GPC1-208ENST00000469694 PRNTQ86SH4 94 aa10.9□□□□□ -0.66
GPC1-208ENST00000469694 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.66
GPC1-208ENST00000469694 IGHV1-3A0A0C4DH29 117 aa10.9□□□□□ -0.67
GPC1-208ENST00000469694 K7ERJ3 54 aa10.9□□□□□ -0.67
GPC1-208ENST00000469694 CRYBA4P53673 196 aa10.9□□□□□ -0.67
GPC1-208ENST00000469694 LY6G5BQ8NDX9 201 aa10.9□□□□□ -0.67
GPC1-208ENST00000469694 PIFOQ8TCI5 191 aa10.9□□□□□ -0.67
GPC1-208ENST00000469694 CGB1A6NKQ9 187 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 HBDP02042 147 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 FXYD7P58549 80 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 PAX8Q06710 450 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 HCP5Q6MZN7 132 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 C8orf46Q8TAG6 207 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 BPESC1Q9GZL8 116 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 D6R8Y8 96 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 E9PLD3 99 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.89□□□□□ -0.67
GPC1-208ENST00000469694 ZNF493Q6ZR52 646 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 RPEQ96AT9 228 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 DKK2Q9UBU2 259 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 U3KQK5 164 aa10.89□□□□□ -0.67
GPC1-208ENST00000469694 SUB1P53999 127 aaKnown RBP eCLIP10.88□□□□□ -0.67
GPC1-208ENST00000469694 MRGPRG-AS1Q2M3A8 158 aa10.88□□□□□ -0.67
GPC1-208ENST00000469694 SH2D6Q7Z4S9 175 aa10.88□□□□□ -0.67
GPC1-208ENST00000469694 FBN2P35556 2912 aa10.88□□□□□ -0.67
GPC1-208ENST00000469694 HOXB4P17483 251 aaPredicted RBP10.87□□□□□ -0.67
GPC1-208ENST00000469694 EFNA4P52798 201 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 ETDBQ3ZM63 59 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 PRELID3AQ96N28 172 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 OTORQ9NRC9 128 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 IGKV2D-26A0A0A0MRZ7 120 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 GOLT1AQ6ZVE7 132 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 TMEM167AQ8TBQ9 72 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 MRAP2Q96G30 205 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 CHAC1Q9BUX1 264 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 TM2D2Q9BX73 214 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 TRBV6-1A0A0K0K1D8 114 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 TIMM23O14925 209 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 MC5RP33032 325 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 NRGNQ92686 78 aa10.87□□□□□ -0.67
GPC1-208ENST00000469694 NHP2Q9NX24 153 aaKnown RBP10.87□□□□□ -0.67
GPC1-208ENST00000469694 SERTM2A0A1B0GWG4 89 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 K7EQM0 130 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 PSMG4Q5JS54 123 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 ARPC1AQ92747 370 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 FBXL15Q9H469 300 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 A0A1W2PPI3 338 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 IGLL5B9A064 214 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 IGHV4-39P01824 125 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 FAM104BQ5XKR9 115 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 Q6AWC8 147 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 ORMDL3Q8N138 153 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 TRGV9Q99603 122 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 TPPP3Q9BW30 176 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 TTTY13Q9BZ97 58 aa10.86□□□□□ -0.67
GPC1-208ENST00000469694 WI2-2373I1.2A0A1W2PRP0 233 aa10.85□□□□□ -0.67
GPC1-208ENST00000469694 H3BMG7 143 aa10.85□□□□□ -0.67
GPC1-208ENST00000469694 LY6LH3BQJ8 138 aa10.85□□□□□ -0.67
GPC1-208ENST00000469694 VMA21Q3ZAQ7 101 aa10.85□□□□□ -0.67
GPC1-208ENST00000469694 VMO1Q7Z5L0 202 aa10.85□□□□□ -0.67
GPC1-208ENST00000469694 EXOC3-AS1Q8N2X6 119 aa10.85□□□□□ -0.67
GPC1-208ENST00000469694 ZNF48Q96MX3 618 aaPredicted RBP10.85□□□□□ -0.67
GPC1-208ENST00000469694 HHLA3Q9XRX5 114 aa10.85□□□□□ -0.67
GPC1-208ENST00000469694 CRYGCP07315 174 aa10.85□□□□□ -0.67
GPC1-208ENST00000469694 CEND1Q8N111 149 aa10.85□□□□□ -0.67
GPC1-208ENST00000469694 DYNAPQ8N1N2 210 aa10.85□□□□□ -0.67
GPC1-208ENST00000469694 GEMIN7Q9H840 131 aaKnown RBP10.85□□□□□ -0.67
GPC1-208ENST00000469694 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
GPC1-208ENST00000469694 RBP4P02753 201 aa10.84□□□□□ -0.67
GPC1-208ENST00000469694 ATP5G2Q06055 141 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms