RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 RPL29P47914 159 aaKnown RBP4.58□□□□□ -1.68
PTCD3-208ENST00000469585 EIF5AP63241 154 aaKnown RBP4.58□□□□□ -1.68
PTCD3-208ENST00000469585 ACOT6Q3I5F7 207 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-208ENST00000469585 ACTL10Q5JWF8 245 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 FAM74A1Q5RGS3 127 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 LCN15Q6UWW0 184 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 Q6ZRP5 223 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 ZNF738Q8NE65 137 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 ZNF414Q96IQ9 312 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 SLC50A1Q9BRV3 221 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 SHANK2-AS3Q9BTD1 123 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 RSG1Q9BU20 258 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 SLC25A39Q9BZJ4 359 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-208ENST00000469585 SLC39A9Q9NUM3 307 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 MRPL36Q9P0J6 103 aaKnown RBP4.58□□□□□ -1.68
PTCD3-208ENST00000469585 HSPB11Q9Y547 144 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 TIMM9Q9Y5J7 89 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 PXMP4Q9Y6I8 212 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 PKD1L1Q8TDX9 2849 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 NOTCH1P46531 2555 aa4.58□□□□□ -1.68
PTCD3-208ENST00000469585 ANK2Q01484 3957 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 IGSF23A1L1A6 192 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 K7EQG2 157 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 TAAR5O14804 337 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 CSN1S1P47710 185 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 H2BFSP57053 126 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 PLP1P60201 277 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 RHOBP62745 196 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 PSG9Q00887 426 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 HAGHQ16775 308 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 KHDC3LQ587J8 217 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 LEMD1Q68G75 181 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 ADAMTSL5Q6ZMM2 481 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 APRG1Q8IVJ8 170 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 SBSPONQ8IVN8 264 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 OR4B1Q8NGF8 309 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 OR2T35Q8NGX2 323 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 OR10J6PQ8NGY7 276 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 GNPNAT1Q96EK6 184 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-208ENST00000469585 TMEM208Q9BTX3 173 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 NPCDR1Q9BY65 106 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 MRPL32Q9BYC8 188 aaKnown RBP4.57□□□□□ -1.68
PTCD3-208ENST00000469585 TP53TG1Q9Y2A0 90 aa4.57□□□□□ -1.68
PTCD3-208ENST00000469585 VWFP04275 2813 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 IGKV1D-37A0A075B6S9 117 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 H3BRN7 92 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 OR7C2O60412 319 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 PFDN1O60925 122 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 GATA2P23769 480 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-208ENST00000469585 TSPOP30536 169 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 XGP55808 180 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 FCN2Q15485 313 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 FAM78BQ5VT40 261 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 MIC13Q5XKP0 118 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 FOXI2Q6ZQN5 318 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 FAM218AQ96MZ4 157 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 MGST2Q99735 147 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 SCRT1Q9BWW7 348 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 SMIM3Q9BZL3 60 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 MFFQ9GZY8 342 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 OR5AC2Q9NZP5 309 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 GOLT1BQ9Y3E0 138 aa4.56□□□□□ -1.68
PTCD3-208ENST00000469585 IGKV1OR2-108A0A075B7D4 117 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 TEX48A0A1B0GUV7 120 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 KANTRA0A1W2PQU2 76 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 A4D1N5 150 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 K7EQM0 130 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 HIST1H1EP10412 219 aaKnown RBP4.55□□□□□ -1.68
PTCD3-208ENST00000469585 OXA1LQ15070 435 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 DEFB135Q30KP9 77 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 AKR1C8PQ5T2L2 129 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 ZC2HC1BQ5TFG8 222 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 EIF5AL1Q6IS14 154 aaKnown RBP4.55□□□□□ -1.68
PTCD3-208ENST00000469585 CMTM2Q8TAZ6 248 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 DCANP1Q8TF63 244 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 C2orf48Q96LS8 159 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 RARRES2Q99969 163 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 TM2D3Q9BRN9 247 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 PARD6GQ9BYG4 376 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-208ENST00000469585 WDR61Q9GZS3 305 aaKnown RBP4.55□□□□□ -1.68
PTCD3-208ENST00000469585 WFDC10AQ9H1F0 79 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 PRELID1Q9Y255 219 aa4.55□□□□□ -1.68
PTCD3-208ENST00000469585 A0A087X0K7 114 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 A0A0D9SG52 128 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 TMEM189A5PLL7 270 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 RBMY1BA6NDE4 496 aaKnown RBP4.54□□□□□ -1.68
PTCD3-208ENST00000469585 RBMY1EA6NEQ0 496 aaKnown RBP4.54□□□□□ -1.68
PTCD3-208ENST00000469585 C3orf84H3BNL1 204 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 TEX46H3BTG2 121 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 RBMY1DP0C7P1 496 aaKnown RBP4.54□□□□□ -1.68
PTCD3-208ENST00000469585 HLA-DRB4P13762 266 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 M6PRP20645 277 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 RAB2AP61019 212 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 UBE2L3P68036 154 aaKnown RBP4.54□□□□□ -1.68
PTCD3-208ENST00000469585 SERF2P84101 59 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 HIST1H1AQ02539 215 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-208ENST00000469585 IL15RAQ13261 267 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 PDE6HQ13956 83 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 IQCF2Q8IXL9 164 aa4.54□□□□□ -1.68
PTCD3-208ENST00000469585 OR11H7Q8NGC8 314 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms