RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 TAS2R45P59539 299 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 TAS2R60P59551 318 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 RANP62826 216 aaKnown RBP8.28□□□□□ -1.08
MCF2L-222ENST00000469558 SERF2P84101 59 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 CD300CQ08708 224 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 PQLC2Q6ZP29 291 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 LYPD1Q8N2G4 141 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 TMEM256Q8N2U0 113 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 Q8TAT8 98 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 RAB24Q969Q5 203 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 LINC00477Q96M19 166 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 C20orf144Q9BQM9 153 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 TMEM208Q9BTX3 173 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 AAMDCQ9H7C9 122 aa8.28□□□□□ -1.08
MCF2L-222ENST00000469558 KLK5Q9Y337 293 aaPredicted RBP8.28□□□□□ -1.08
MCF2L-222ENST00000469558 TRAV10A0A0B4J240 114 aa8.27□□□□□ -1.09
MCF2L-222ENST00000469558 DIRC3C9JPN6 131 aa8.27□□□□□ -1.09
MCF2L-222ENST00000469558 J3KRW8 73 aa8.27□□□□□ -1.09
MCF2L-222ENST00000469558 ZNF324O75467 553 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-222ENST00000469558 JTBO76095 146 aa8.27□□□□□ -1.09
MCF2L-222ENST00000469558 CDC34P49427 236 aaPredicted RBP8.27□□□□□ -1.09
MCF2L-222ENST00000469558 BTN1A1Q13410 526 aa8.27□□□□□ -1.09
MCF2L-222ENST00000469558 Q6ZNX1 250 aa8.27□□□□□ -1.09
MCF2L-222ENST00000469558 KCNRGQ8N5I3 272 aa8.27□□□□□ -1.09
MCF2L-222ENST00000469558 C2CD4CQ8TF44 421 aa8.27□□□□□ -1.09
MCF2L-222ENST00000469558 ST6GAL2Q96JF0 529 aa8.27□□□□□ -1.09
MCF2L-222ENST00000469558 LINC01587Q99440 93 aa8.27□□□□□ -1.09
MCF2L-222ENST00000469558 PPP1R14DQ9NXH3 145 aa8.27□□□□□ -1.09
MCF2L-222ENST00000469558 EPPK1P58107 5090 aaKnown RBP8.27□□□□□ -1.09
MCF2L-222ENST00000469558 TRAV12-3A0A0B4J271 114 aa8.26□□□□□ -1.09
MCF2L-222ENST00000469558 A0A1W2PPV4 95 aa8.26□□□□□ -1.09
MCF2L-222ENST00000469558 RBAKDNA6NC62 111 aa8.26□□□□□ -1.09
MCF2L-222ENST00000469558 HMSDA8MTL9 139 aa8.26□□□□□ -1.09
MCF2L-222ENST00000469558 H7BYZ3 331 aa8.26□□□□□ -1.09
MCF2L-222ENST00000469558 GCHFRP30047 84 aa8.26□□□□□ -1.09
MCF2L-222ENST00000469558 LEPP41159 167 aa8.26□□□□□ -1.09
MCF2L-222ENST00000469558 ZNF345Q14585 488 aa8.26□□□□□ -1.09
MCF2L-222ENST00000469558 GNPNAT1Q96EK6 184 aaPredicted RBP8.26□□□□□ -1.09
MCF2L-222ENST00000469558 NIPSNAP3BQ9BS92 247 aa8.26□□□□□ -1.09
MCF2L-222ENST00000469558 ZNF492Q9P255 531 aa8.26□□□□□ -1.09
MCF2L-222ENST00000469558 IGHV4-4A0A075B6R2 117 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 DEFB131BA0A096LNP1 70 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 BORCS7-ASMTA0A0B4J1R7 106 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 C7orf71A4D174 169 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 GGTLC3B5MD39 225 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 IGLL5B9A064 214 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 TAAR5O14804 337 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 SLC25A5P05141 298 aaKnown RBP8.25□□□□□ -1.09
MCF2L-222ENST00000469558 ZNF138P52744 262 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 GNG5P63218 68 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 LINC00612Q8N6U2 182 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 C11orf72Q8NBR9 251 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 TMEM263Q8WUH6 116 aaKnown RBP8.25□□□□□ -1.09
MCF2L-222ENST00000469558 TVP23CQ96ET8 276 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 OTORQ9NRC9 128 aa8.25□□□□□ -1.09
MCF2L-222ENST00000469558 TRBV7-9A0A0J9YWB2 115 aa8.24□□□□□ -1.09
MCF2L-222ENST00000469558 TEX48A0A1B0GUV7 120 aa8.24□□□□□ -1.09
MCF2L-222ENST00000469558 PGPA6NDG6 321 aa8.24□□□□□ -1.09
MCF2L-222ENST00000469558 LYRM9A8MSI8 78 aa8.24□□□□□ -1.09
MCF2L-222ENST00000469558 MBP02144 154 aa8.24□□□□□ -1.09
MCF2L-222ENST00000469558 NMBP08949 121 aa8.24□□□□□ -1.09
MCF2L-222ENST00000469558 C16orf74Q96GX8 76 aa8.24□□□□□ -1.09
MCF2L-222ENST00000469558 LINC00467Q9BRT7 94 aa8.24□□□□□ -1.09
MCF2L-222ENST00000469558 TRAV8-1A0A0A6YYK1 113 aa8.23□□□□□ -1.09
MCF2L-222ENST00000469558 LY6G6CO95867 125 aa8.23□□□□□ -1.09
MCF2L-222ENST00000469558 HTN1P15515 57 aa8.23□□□□□ -1.09
MCF2L-222ENST00000469558 RNASE4P34096 147 aaKnown RBP8.23□□□□□ -1.09
MCF2L-222ENST00000469558 FHITP49789 147 aa8.23□□□□□ -1.09
MCF2L-222ENST00000469558 TMEM78Q5T7P6 136 aa8.23□□□□□ -1.09
MCF2L-222ENST00000469558 LGALS9CQ6DKI2 356 aa8.23□□□□□ -1.09
MCF2L-222ENST00000469558 ZNF493Q6ZR52 646 aa8.23□□□□□ -1.09
MCF2L-222ENST00000469558 HYLS1Q96M11 299 aa8.23□□□□□ -1.09
MCF2L-222ENST00000469558 PYGO2Q9BRQ0 406 aa8.23□□□□□ -1.09
MCF2L-222ENST00000469558 ACTR3CQ9C0K3 210 aaPredicted RBP8.23□□□□□ -1.09
MCF2L-222ENST00000469558 TMPRSS5Q9H3S3 457 aa8.23□□□□□ -1.09
MCF2L-222ENST00000469558 FRAS1Q86XX4 4008 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 CTXND1A0A1B0GTU2 59 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 CXorf1O96002 111 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 IGLV2-11P01706 119 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 TCTAP57738 103 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 DAD1P61803 113 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 GOLT1AQ6ZVE7 132 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 TCTE3Q8IZS6 198 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 ARL6IP6Q8N6S5 226 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 RXFP4Q8TDU9 374 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 TMED6Q8WW62 240 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 ARPC5LQ9BPX5 153 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 NOP10Q9NPE3 64 aaKnown RBP8.22□□□□□ -1.09
MCF2L-222ENST00000469558 TP53TG3Q9ULZ0 132 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 DNAH10Q8IVF4 4471 aa8.22□□□□□ -1.09
MCF2L-222ENST00000469558 BCL2L11O43521 198 aa8.21□□□□□ -1.1
MCF2L-222ENST00000469558 TCRAP04437 139 aa8.21□□□□□ -1.1
MCF2L-222ENST00000469558 GPX1P07203 203 aa8.21□□□□□ -1.1
MCF2L-222ENST00000469558 DEFB130BP0DP73 79 aa8.21□□□□□ -1.1
MCF2L-222ENST00000469558 DEFB130AP0DP74 79 aa8.21□□□□□ -1.1
MCF2L-222ENST00000469558 CSN1S1P47710 185 aa8.21□□□□□ -1.1
MCF2L-222ENST00000469558 FGF8P55075 233 aaPredicted RBP8.21□□□□□ -1.1
MCF2L-222ENST00000469558 ANXA2RQ3ZCQ2 193 aa8.21□□□□□ -1.1
MCF2L-222ENST00000469558 RPH3ALQ9UNE2 315 aa8.21□□□□□ -1.1
MCF2L-222ENST00000469558 TIMM8BQ9Y5J9 83 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms