RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 WDR83OSQ9Y284 106 aa8.37□□□□□ -1.07
HDAC3-204ENST00000469207 IGKV2-40A0A087WW87 121 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-204ENST00000469207 PLA2G10O15496 165 aa8.36□□□□□ -1.07
HDAC3-204ENST00000469207 PAX4O43316 350 aa8.36□□□□□ -1.07
HDAC3-204ENST00000469207 PRAF2O60831 178 aa8.36□□□□□ -1.07
HDAC3-204ENST00000469207 IGKV2D-40P01614 121 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-204ENST00000469207 GUK1Q16774 197 aa8.36□□□□□ -1.07
HDAC3-204ENST00000469207 LYPD5Q6UWN5 251 aa8.36□□□□□ -1.07
HDAC3-204ENST00000469207 LYPD1Q8N2G4 141 aa8.36□□□□□ -1.07
HDAC3-204ENST00000469207 OR1L4Q8NGR5 311 aa8.36□□□□□ -1.07
HDAC3-204ENST00000469207 VGLL1Q99990 258 aa8.36□□□□□ -1.07
HDAC3-204ENST00000469207 SEC22CQ9BRL7 303 aa8.36□□□□□ -1.07
HDAC3-204ENST00000469207 RBM38Q9H0Z9 239 aaKnown RBP8.36□□□□□ -1.07
HDAC3-204ENST00000469207 SLC39A9Q9NUM3 307 aa8.36□□□□□ -1.07
HDAC3-204ENST00000469207 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
HDAC3-204ENST00000469207 TRAV6A0A075B6T7 132 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 UBE2L5PA0A1B0GUS4 154 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 IGSF23A1L1A6 192 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 C5orf51A6NDU8 294 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 MPDU1O75352 247 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 GPX1P07203 203 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 INAFM2P0DMQ5 153 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 RPL29P47914 159 aaKnown RBP8.35□□□□□ -1.07
HDAC3-204ENST00000469207 KRTAP10-1P60331 282 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 BAXQ07812 192 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 RAB31Q13636 194 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 FHL2Q14192 279 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 ANXA2RQ3ZCQ2 193 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 FAM122CQ6P4D5 195 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 LINC00477Q96M19 166 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 C18orf15Q96N68 181 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 C8orf49Q96NF6 230 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 UQCC1Q9NVA1 299 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 PGPEP1Q9NXJ5 209 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 TIMM9Q9Y5J7 89 aa8.35□□□□□ -1.07
HDAC3-204ENST00000469207 CENPXA8MT69 81 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 SMR3BP02814 79 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-204ENST00000469207 HIST1H1EP10412 219 aaKnown RBP8.34□□□□□ -1.07
HDAC3-204ENST00000469207 IL7P13232 177 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 CRYBA4P53673 196 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 TCL1AP56279 114 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 ICAM4Q14773 271 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 ZNF846Q147U1 533 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 VWC2Q2TAL6 325 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 ZFAND2AQ8N6M9 145 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 ZNF680Q8NEM1 530 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 PFDN5Q99471 154 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 LINC00467Q9BRT7 94 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 C20orf85Q9H1P6 137 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 HHLA3Q9XRX5 114 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 ICOSQ9Y6W8 199 aa8.34□□□□□ -1.07
HDAC3-204ENST00000469207 E5RGE8 158 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 RGS13O14921 159 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 ZNF253O75346 499 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 SFTA3P0C7M3 94 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 FGF7P21781 194 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 HAMPP81172 84 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 C9orf47Q6ZRZ4 202 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 TMEM252Q8N6L7 170 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
HDAC3-204ENST00000469207 ST6GAL2Q96JF0 529 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 SLC25A2Q9BXI2 301 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 TMEM14CQ9P0S9 112 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 MDFICQ9P1T7 246 aa8.33□□□□□ -1.08
HDAC3-204ENST00000469207 IGHV1OR15-1A0A075B7D0 117 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 A0A087WTM6 91 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 CRISP2P16562 243 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 SULT1A1P50225 295 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 S100A10P60903 97 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 IL15RAQ13261 267 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 RAB32Q13637 225 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 MUC21Q5SSG8 566 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 Q5VSD8 79 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 MIR17HGQ75NE6 70 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 C12orf45Q8N5I9 185 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-204ENST00000469207 Q8TAT8 98 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 FAM167A-AS1Q96KT0 104 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 C2orf50Q96LR7 162 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 LYRM2Q9NU23 88 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-204ENST00000469207 ZNF492Q9P255 531 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 PRO0255Q9UI72 69 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 DNAH8Q96JB1 4490 aa8.32□□□□□ -1.08
HDAC3-204ENST00000469207 TCRBP04435 133 aa8.31□□□□□ -1.08
HDAC3-204ENST00000469207 S100A11P31949 105 aa8.31□□□□□ -1.08
HDAC3-204ENST00000469207 ERVFC1-1P60608 527 aa8.31□□□□□ -1.08
HDAC3-204ENST00000469207 NHLH2Q02577 135 aa8.31□□□□□ -1.08
HDAC3-204ENST00000469207 WFDC10BQ8IUB3 73 aa8.31□□□□□ -1.08
HDAC3-204ENST00000469207 ZNF479Q96JC4 524 aa8.31□□□□□ -1.08
HDAC3-204ENST00000469207 PRELID1Q9Y255 219 aa8.31□□□□□ -1.08
HDAC3-204ENST00000469207 MYCBP2O75592 4640 aa8.3□□□□□ -1.08
HDAC3-204ENST00000469207 K7EQD1 137 aa8.3□□□□□ -1.08
HDAC3-204ENST00000469207 EREGO14944 169 aa8.3□□□□□ -1.08
HDAC3-204ENST00000469207 LYRM1O43325 122 aa8.3□□□□□ -1.08
HDAC3-204ENST00000469207 OR10J4P0C629 311 aa8.3□□□□□ -1.08
HDAC3-204ENST00000469207 NBEAP1P0C6P0 100 aa8.3□□□□□ -1.08
HDAC3-204ENST00000469207 MRPL23Q16540 153 aaKnown RBP8.3□□□□□ -1.08
HDAC3-204ENST00000469207 IBA57Q5T440 356 aaKnown RBP8.3□□□□□ -1.08
HDAC3-204ENST00000469207 TMEM78Q5T7P6 136 aa8.3□□□□□ -1.08
HDAC3-204ENST00000469207 NEGR1Q7Z3B1 354 aa8.3□□□□□ -1.08
HDAC3-204ENST00000469207 THAP6Q8TBB0 222 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms