RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 TNFRSF13BO14836 293 aaPredicted RBP9.84□□□□□ -0.83
USP11-206ENST00000469080 SLC25A5P05141 298 aaKnown RBP9.84□□□□□ -0.83
USP11-206ENST00000469080 CT45A10P0DMU9 189 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 GCHFRP30047 84 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 LY6EQ16553 131 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 TTC32Q5I0X7 151 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 MORN5Q5VZ52 161 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 SLC25A48Q6ZT89 311 aaKnown RBP9.84□□□□□ -0.83
USP11-206ENST00000469080 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.84□□□□□ -0.83
USP11-206ENST00000469080 PRELID3AQ96N28 172 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 TMEM133Q9H2Q1 129 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 YTHDF2Q9Y5A9 579 aaKnown RBP9.84□□□□□ -0.83
USP11-206ENST00000469080 CSN1S1P47710 185 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 SUB1P53999 127 aaKnown RBP eCLIP9.84□□□□□ -0.83
USP11-206ENST00000469080 OR5AN1Q8NGI8 311 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 CDIP1Q9H305 208 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 KIR2DS2P43631 304 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 WT1-ASQ06250 92 aa9.84□□□□□ -0.83
USP11-206ENST00000469080 CGB1A6NKQ9 187 aa9.83□□□□□ -0.84
USP11-206ENST00000469080 BCL6BQ8N143 479 aaPredicted RBP9.83□□□□□ -0.84
USP11-206ENST00000469080 CSMD2Q7Z408 3487 aa9.83□□□□□ -0.84
USP11-206ENST00000469080 FCN3O75636 299 aa9.83□□□□□ -0.84
USP11-206ENST00000469080 TMEM219Q86XT9 240 aa9.83□□□□□ -0.84
USP11-206ENST00000469080 OR8A1Q8NGG7 326 aa9.83□□□□□ -0.84
USP11-206ENST00000469080 MRPL36Q9P0J6 103 aaKnown RBP9.83□□□□□ -0.84
USP11-206ENST00000469080 IZUMO1RA6ND01 250 aa9.83□□□□□ -0.84
USP11-206ENST00000469080 OR5AL1P0C617 328 aa9.83□□□□□ -0.84
USP11-206ENST00000469080 ADORA2A-AS1P86434 159 aa9.83□□□□□ -0.84
USP11-206ENST00000469080 C10orf113Q5VZT2 155 aa9.83□□□□□ -0.84
USP11-206ENST00000469080 IGFL4Q6B9Z1 124 aa9.83□□□□□ -0.84
USP11-206ENST00000469080 BRD3OSQ6XYD6 125 aa9.83□□□□□ -0.84
USP11-206ENST00000469080 CELSR2Q9HCU4 2923 aa9.82□□□□□ -0.84
USP11-206ENST00000469080 IGKV1OR2-108A0A075B7D4 117 aa9.82□□□□□ -0.84
USP11-206ENST00000469080 KIR2DL4Q99706 377 aa9.82□□□□□ -0.84
USP11-206ENST00000469080 ZNF137PP52743 207 aa9.82□□□□□ -0.84
USP11-206ENST00000469080 FXYD2P54710 66 aa9.82□□□□□ -0.84
USP11-206ENST00000469080 LINC00305Q7Z4B0 112 aa9.82□□□□□ -0.84
USP11-206ENST00000469080 A0A1W2PPI3 338 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 PMS2P5A8MQ11 134 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 RPL11P62913 178 aaKnown RBP9.81□□□□□ -0.84
USP11-206ENST00000469080 FAM162BQ5T6X4 162 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 NUP37Q8NFH4 326 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 C18orf15Q96N68 181 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 C1RLQ9NZP8 487 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 PGPA6NDG6 321 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 FOXI1Q12951 378 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 FAM168AQ92567 244 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 FOXA2Q9Y261 457 aaPredicted RBP9.81□□□□□ -0.84
USP11-206ENST00000469080 TRAV8-1A0A0A6YYK1 113 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 SMAD7O15105 426 aaKnown RBP9.81□□□□□ -0.84
USP11-206ENST00000469080 CRXO43186 299 aaPredicted RBP9.81□□□□□ -0.84
USP11-206ENST00000469080 TGFAP01135 160 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 FCER1GP30273 86 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 GATA4P43694 442 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 OR4X2Q8NGF9 303 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 PAXXQ9BUH6 204 aa9.81□□□□□ -0.84
USP11-206ENST00000469080 PRCDQ00LT1 54 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 FAM120AOSQ5T036 256 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 Q6AWC8 147 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 CSDC2Q9Y534 153 aaKnown RBP9.8□□□□□ -0.84
USP11-206ENST00000469080 OR2J3O76001 311 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 MEIG1Q5JSS6 88 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 GDF5OSQ5U4N7 250 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 RNASE2P10153 161 aaKnown RBP9.8□□□□□ -0.84
USP11-206ENST00000469080 GAGE2BQ13066 116 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 GAGE2EQ4V326 116 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 RUSC1-AS1Q66K80 236 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 PCP2Q8IVA1 136 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 SRSF12Q8WXF0 261 aaKnown RBP9.8□□□□□ -0.84
USP11-206ENST00000469080 MBD6Q96DN6 1003 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 BPESC1Q9GZL8 116 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 GAGE2DQ9UEU5 116 aa9.8□□□□□ -0.84
USP11-206ENST00000469080 IGHV1-3A0A0C4DH29 117 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 FAM159AQ6UWV7 190 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 C8orf46Q8TAG6 207 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 GTSF1Q8WW33 167 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 PTH2Q96A98 100 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 OSTCQ9NRP0 149 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 TMEM14BQ9NUH8 114 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 A0A087WX48 190 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 TRAV25A0A0B4J276 109 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 A8MWL6 223 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 COL8A1P27658 744 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 UCNP55089 124 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 MRPL23Q16540 153 aaKnown RBP9.79□□□□□ -0.84
USP11-206ENST00000469080 LCNL1Q6ZST4 164 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 PPP1R27Q86WC6 154 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 USP24Q9UPU5 2620 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 CD69Q07108 199 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 OR9G4Q8NGQ1 327 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 TXNDC17Q9BRA2 123 aa9.79□□□□□ -0.84
USP11-206ENST00000469080 NCR2O95944 276 aa9.78□□□□□ -0.84
USP11-206ENST00000469080 NHLRC4P0CG21 123 aaPredicted RBP9.78□□□□□ -0.84
USP11-206ENST00000469080 SFTA2Q6UW10 78 aa9.78□□□□□ -0.84
USP11-206ENST00000469080 RASL11BQ9BPW5 248 aa9.78□□□□□ -0.84
USP11-206ENST00000469080 DSCAML1Q8TD84 2053 aa9.78□□□□□ -0.84
USP11-206ENST00000469080 KLF5Q13887 457 aaPredicted RBP9.78□□□□□ -0.84
USP11-206ENST00000469080 CR1LQ2VPA4 569 aa9.78□□□□□ -0.84
USP11-206ENST00000469080 OR1L4Q8NGR5 311 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms