RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 H3BMM0 161 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 LGALS9O00182 355 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 ATOX1O00244 68 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 TIMM23O14925 209 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 SPRY2O43597 315 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 EFNA2O43921 213 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 PPP1R17O96001 155 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 TRACP01848 142 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 COX6CP09669 75 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 B4GALT1P15291 398 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 COX7CP15954 63 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 CNTFRP26992 372 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 GLRXP35754 106 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 ZNF137PP52743 207 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 SRSF9Q13242 221 aaKnown RBP eCLIP3.82□□□□□ -1.8
SF3B1-207ENST00000468925 CCL14Q16627 93 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 ALKBH6Q3KRA9 238 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 GAGE2AQ6NT46 116 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 AAED1Q7RTV5 226 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 Q86TA4 180 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 Q8N8P6 123 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 UBE2WQ96B02 151 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 C21orf62Q9NYP8 219 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 PRO1854Q9UHT4 67 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 CDH23Q9H251 3354 aa3.82□□□□□ -1.8
SF3B1-207ENST00000468925 IGLV3-12A0A075B6K2 115 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 A0A0B4J2C4 111 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 C12orf77C9JDV5 145 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 HSPB6O14558 160 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 OVOL1O14753 267 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 CCL16O15467 120 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 LINC00694P0DN24 101 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 ZNF138P52744 262 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 BRWD1-AS2P59051 145 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 HERVK_113P63121 156 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 FOXF2Q12947 444 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 C1orf61Q13536 156 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 PDE6HQ13956 83 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 ORMDL2Q53FV1 153 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-207ENST00000468925 LINC00643Q86TS7 51 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 NDUFA11Q86Y39 141 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 ZCCHC24Q8N2G6 241 aaKnown RBP3.81□□□□□ -1.8
SF3B1-207ENST00000468925 KIR2DL5BQ8NHK3 375 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 UBALD1Q8TB05 177 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 ITLN1Q8WWA0 313 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 SRSF12Q8WXF0 261 aaKnown RBP3.81□□□□□ -1.8
SF3B1-207ENST00000468925 C18orf15Q96N68 181 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 CNFNQ9BYD5 112 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 DYNLRB1Q9NP97 96 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 DKK2Q9UBU2 259 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 ZNF256Q9Y2P7 627 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-207ENST00000468925 TIMM8BQ9Y5J9 83 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-207ENST00000468925 KIAA1549Q9HCM3 1950 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 EPG5Q9HCE0 2579 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 CACNA1BQ00975 2339 aa3.81□□□□□ -1.8
SF3B1-207ENST00000468925 EXPH5Q8NEV8 1989 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 PCDH15Q96QU1 1955 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 ZDBF2Q9HCK1 2354 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 TRAV8-1A0A0A6YYK1 113 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 TRBV30A0A0K0K1B3 111 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 LINC00473A8K010 186 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 H3BVH4 76 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 K7EM74 188 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 UPK2O00526 184 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 TCL1BO95988 128 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 CD7P09564 240 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 ARMS2P0C7Q2 107 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 RPL7P18124 248 aaKnown RBP3.8□□□□□ -1.8
SF3B1-207ENST00000468925 LEPP41159 167 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 EBI3Q14213 229 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 LAGE3Q14657 143 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 DEFB110Q30KQ9 67 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 SCGB1D4Q6XE38 83 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 LINC00305Q7Z4B0 112 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 GTSCR1Q86UQ5 136 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 RFESDQ8TAC1 157 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 IGFBPL1Q8WX77 278 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 ODF3Q96PU9 254 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 FOXC2Q99958 501 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 FAM173AQ9BQD7 235 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 MCRIP2Q9BUT9 160 aaKnown RBP3.8□□□□□ -1.8
SF3B1-207ENST00000468925 Q9H3A6 140 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 PRORYQ9H606 182 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 C5orf42Q9H799 3197 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 CEP192Q8TEP8 1941 aa3.8□□□□□ -1.8
SF3B1-207ENST00000468925 WDFY4Q6ZS81 3184 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 IGKV3D-15A0A087WSY6 115 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 IGKV2D-26A0A0A0MRZ7 120 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 IGHV1-45A0A0A0MS14 117 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 A0A0U1RRA0 63 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 IGLC6P0CF74 106 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 RNASE2P10153 161 aaKnown RBP3.79□□□□□ -1.8
SF3B1-207ENST00000468925 MRPL51Q4U2R6 128 aaKnown RBP3.79□□□□□ -1.8
SF3B1-207ENST00000468925 HES3Q5TGS1 186 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 ZNF474Q6S9Z5 364 aaPredicted RBP3.79□□□□□ -1.8
SF3B1-207ENST00000468925 DTX2Q86UW9 622 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 C11orf53Q8IXP5 236 aa3.79□□□□□ -1.8
SF3B1-207ENST00000468925 SPRY4Q9C004 299 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms