RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PPTC7Q8NI37 304 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 SLC7A6Q92536 515 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 GPR146Q96CH1 333 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 MRPS24Q96EL2 167 aaKnown RBP1.99□□□□□ -2.09
LSM5-209ENST00000468872 COMMD5Q9GZQ3 224 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 WNK2Q9Y3S1 2297 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 ALMS1Q8TCU4 4167 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 MYH2Q9UKX2 1941 aa1.99□□□□□ -2.09
LSM5-209ENST00000468872 DNAH3Q8TD57 4116 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 CADP27708 2225 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 FAT1Q14517 4588 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 TRGV5A0A0B4J1U4 118 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 FUOMA2VDF0 154 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 DPRXA6NFQ7 191 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 OR2J2O76002 312 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 NPYP01303 97 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 ZNF705DP0CH99 300 aaPredicted RBP1.98□□□□□ -2.09
LSM5-209ENST00000468872 SPI1P17947 270 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 ERP29P30040 261 aaKnown RBP1.98□□□□□ -2.09
LSM5-209ENST00000468872 G6PCP35575 357 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 RAB13P51153 203 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 ZNF80P51504 273 aaPredicted RBP1.98□□□□□ -2.09
LSM5-209ENST00000468872 NCALDP61601 193 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 GNG5P63218 68 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 HBA1P69905 142 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 CCL20P78556 96 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 LRP2P98164 4655 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 TSNQ15631 228 aaKnown RBP1.98□□□□□ -2.09
LSM5-209ENST00000468872 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 LHFPL1Q86WI0 220 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 SLC25A40Q8TBP6 338 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 TOMM6Q96B49 74 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 ZHX1-C8orf76Q96EF9 292 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 SH3BGRL3Q9H299 93 aa1.98□□□□□ -2.09
LSM5-209ENST00000468872 RBM7Q9Y580 266 aaKnown RBP1.98□□□□□ -2.09
LSM5-209ENST00000468872 TRAV41A0A0B4J266 112 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 BUB1B-PAK6H3BSN5 160 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 TXNDC9O14530 226 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 IGKV1-16P04430 117 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 RBP1P09455 135 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 PPIBP23284 216 aaKnown RBP1.97□□□□□ -2.09
LSM5-209ENST00000468872 PEBP1P30086 187 aaKnown RBP1.97□□□□□ -2.09
LSM5-209ENST00000468872 SRIP30626 198 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 GLRXP35754 106 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 HINT1P49773 126 aaPredicted RBP1.97□□□□□ -2.09
LSM5-209ENST00000468872 TCTAP57738 103 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 ARPC4P59998 168 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 ZNF90Q03938 601 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 Q6Q795 121 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 STX19Q8N4C7 294 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 OR13C4Q8NGS5 318 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 PYDC1Q8WXC3 89 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 H1FXQ92522 213 aaKnown RBP1.97□□□□□ -2.09
LSM5-209ENST00000468872 OR8D2Q9GZM6 311 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 C8orf4Q9NR00 106 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 LYRM2Q9NU23 88 aaPredicted RBP1.97□□□□□ -2.09
LSM5-209ENST00000468872 FUT9Q9Y231 359 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 U3KQA8 63 aa1.97□□□□□ -2.09
LSM5-209ENST00000468872 NYNRINQ9P2P1 1898 aaKnown RBP1.97□□□□□ -2.09
LSM5-209ENST00000468872 TRBV19A0A075B6N1 114 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 TMEM269A0A1B0GVZ9 245 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 CLDN25C9JDP6 229 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 LEPROTO15243 131 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 PRM2P04554 102 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 CSN2P05814 226 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 BPGMP07738 259 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 SMIM17P0DL12 118 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 ALDH3A1P30838 453 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 PHBP35232 272 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 AADACL3Q5VUY0 350 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 OR13D1Q8NGV5 346 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 ZNF675Q8TD23 568 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 DERL1Q9BUN8 251 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 ACER3Q9NUN7 267 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 IL36BQ9NZH7 164 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 GINS2Q9Y248 185 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 AMMECR1Q9Y4X0 333 aaPredicted RBP1.96□□□□□ -2.1
LSM5-209ENST00000468872 NUMA1Q14980 2115 aa1.96□□□□□ -2.1
LSM5-209ENST00000468872 APOBP04114 4563 aaKnown RBP1.95□□□□□ -2.1
LSM5-209ENST00000468872 TRAV9-1A0A075B6T8 112 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 ARRDC5A6NEK1 342 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 PRORSD1PA6NEY8 169 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 G3V2T6 193 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 PIAS1O75925 651 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 CRHP06850 196 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 UCHL1P09936 223 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 TFPTP0C1Z6 253 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 HIST1H2BOP23527 126 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 S100A7P31151 101 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 HIST1H2BBP33778 126 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 CSN1S1P47710 185 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 HIST1H2BDP58876 126 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 TAS2R20P59543 309 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 HIST1H2BCP62807 126 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 KISS1Q15726 138 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 HIST2H2BEQ16778 126 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 KRTAP20-1Q3LI63 56 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 PABPC1L2AQ5JQF8 200 aa1.95□□□□□ -2.1
LSM5-209ENST00000468872 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.95□□□□□ -2.1
LSM5-209ENST00000468872 AKR1C8PQ5T2L2 129 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms