RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 SNRPD3P62318 126 aaKnown RBP13.07□□□□□ -0.32
RPL39-202ENST00000468844 MRPL53Q96EL3 112 aaKnown RBP13.07□□□□□ -0.32
RPL39-202ENST00000468844 LINC00479Q96M42 142 aa13.07□□□□□ -0.32
RPL39-202ENST00000468844 B4DEV8 164 aa13.06□□□□□ -0.32
RPL39-202ENST00000468844 S100A8P05109 93 aa13.06□□□□□ -0.32
RPL39-202ENST00000468844 PSMG4Q5JS54 123 aa13.06□□□□□ -0.32
RPL39-202ENST00000468844 GOLT1AQ6ZVE7 132 aa13.06□□□□□ -0.32
RPL39-202ENST00000468844 RPUSD4Q96CM3 377 aaKnown RBP13.06□□□□□ -0.32
RPL39-202ENST00000468844 WIPF1O43516 503 aa13.05□□□□□ -0.32
RPL39-202ENST00000468844 CSN1S1P47710 185 aa13.05□□□□□ -0.32
RPL39-202ENST00000468844 FABP9Q0Z7S8 132 aa13.05□□□□□ -0.32
RPL39-202ENST00000468844 ELOBQ15370 118 aa13.05□□□□□ -0.32
RPL39-202ENST00000468844 ARL6IP6Q8N6S5 226 aa13.05□□□□□ -0.32
RPL39-202ENST00000468844 ZNF738Q8NE65 137 aa13.05□□□□□ -0.32
RPL39-202ENST00000468844 PARLQ9H300 379 aa13.05□□□□□ -0.32
RPL39-202ENST00000468844 IGKV2-40A0A087WW87 121 aaPredicted RBP13.05□□□□□ -0.32
RPL39-202ENST00000468844 TRAV8-1A0A0A6YYK1 113 aa13.05□□□□□ -0.32
RPL39-202ENST00000468844 IGKV2D-40P01614 121 aaPredicted RBP13.05□□□□□ -0.32
RPL39-202ENST00000468844 PNRC1Q12796 327 aaPredicted RBP13.05□□□□□ -0.32
RPL39-202ENST00000468844 SGK494Q96LW2 274 aa13.05□□□□□ -0.32
RPL39-202ENST00000468844 F6UB75 175 aa13.04□□□□□ -0.32
RPL39-202ENST00000468844 ODF3L2Q3SX64 289 aa13.04□□□□□ -0.32
RPL39-202ENST00000468844 MAP6D1Q9H9H5 199 aa13.04□□□□□ -0.32
RPL39-202ENST00000468844 TRAV34A0A0B4J273 112 aa13.03□□□□□ -0.32
RPL39-202ENST00000468844 RPS10P46783 165 aaKnown RBP13.03□□□□□ -0.32
RPL39-202ENST00000468844 PRR31Q5SQ13 230 aa13.03□□□□□ -0.32
RPL39-202ENST00000468844 TRBV20OR9-2A0A075B6H5 130 aa13.03□□□□□ -0.32
RPL39-202ENST00000468844 IGLV2-11P01706 119 aa13.03□□□□□ -0.32
RPL39-202ENST00000468844 SMIM6P0DI80 62 aa13.03□□□□□ -0.32
RPL39-202ENST00000468844 ZNF674Q2M3X9 581 aa13.03□□□□□ -0.32
RPL39-202ENST00000468844 BEAN1Q3B7T3 259 aa13.03□□□□□ -0.32
RPL39-202ENST00000468844 GDF5OSQ5U4N7 250 aa13.03□□□□□ -0.32
RPL39-202ENST00000468844 VGLL1Q99990 258 aa13.03□□□□□ -0.32
RPL39-202ENST00000468844 TMEM242Q9NWH2 141 aa13.03□□□□□ -0.32
RPL39-202ENST00000468844 KLF12Q9Y4X4 402 aa13.03□□□□□ -0.32
RPL39-202ENST00000468844 CXCL1P09341 107 aa13.02□□□□□ -0.32
RPL39-202ENST00000468844 ZNF705DP0CH99 300 aaPredicted RBP13.02□□□□□ -0.32
RPL39-202ENST00000468844 ZNF705BP0CI00 300 aaPredicted RBP13.02□□□□□ -0.32
RPL39-202ENST00000468844 CNN1P51911 297 aaKnown RBP13.02□□□□□ -0.32
RPL39-202ENST00000468844 DEFB131AP59861 70 aa13.02□□□□□ -0.32
RPL39-202ENST00000468844 S100A12P80511 92 aa13.02□□□□□ -0.32
RPL39-202ENST00000468844 ZNF124Q15973 351 aa13.02□□□□□ -0.32
RPL39-202ENST00000468844 KRTAP21-3Q3LHN1 58 aa13.02□□□□□ -0.32
RPL39-202ENST00000468844 OXLD1Q5BKU9 147 aa13.02□□□□□ -0.32
RPL39-202ENST00000468844 TMEM75Q8N9X5 138 aa13.02□□□□□ -0.32
RPL39-202ENST00000468844 SDF2L1Q9HCN8 221 aa13.02□□□□□ -0.32
RPL39-202ENST00000468844 SERTM2A0A1B0GWG4 89 aa13.01□□□□□ -0.33
RPL39-202ENST00000468844 CD7P09564 240 aa13.01□□□□□ -0.33
RPL39-202ENST00000468844 SMIM7Q9BQ49 75 aa13.01□□□□□ -0.33
RPL39-202ENST00000468844 RBAKDNA6NC62 111 aa13.01□□□□□ -0.33
RPL39-202ENST00000468844 K7EQM0 130 aa13.01□□□□□ -0.33
RPL39-202ENST00000468844 S100A9P06702 114 aaKnown RBP13.01□□□□□ -0.33
RPL39-202ENST00000468844 UBE2G1P62253 170 aa13.01□□□□□ -0.33
RPL39-202ENST00000468844 TMEM183BQ1AE95 376 aa13.01□□□□□ -0.33
RPL39-202ENST00000468844 OR8A1Q8NGG7 326 aa13.01□□□□□ -0.33
RPL39-202ENST00000468844 URGCP-MRPS24S4R325 110 aa13.01□□□□□ -0.33
RPL39-202ENST00000468844 ERCC8Q13216 396 aa13□□□□□ -0.33
RPL39-202ENST00000468844 APRG1Q8IVJ8 170 aa13□□□□□ -0.33
RPL39-202ENST00000468844 FMC1Q96HJ9 113 aa13□□□□□ -0.33
RPL39-202ENST00000468844 IGF2BP2-AS1Q96M15 143 aa13□□□□□ -0.33
RPL39-202ENST00000468844 ASCL2Q99929 193 aa13□□□□□ -0.33
RPL39-202ENST00000468844 TGIF2-C20orf24A0A0A6YYL0 155 aa13□□□□□ -0.33
RPL39-202ENST00000468844 PGPEP1LA6NFU8 196 aa13□□□□□ -0.33
RPL39-202ENST00000468844 A0A0J9YX75 114 aa12.99□□□□□ -0.33
RPL39-202ENST00000468844 HIST1H1AQ02539 215 aaPredicted RBP12.99□□□□□ -0.33
RPL39-202ENST00000468844 CENPWQ5EE01 88 aa12.99□□□□□ -0.33
RPL39-202ENST00000468844 C9orf47Q6ZRZ4 202 aa12.99□□□□□ -0.33
RPL39-202ENST00000468844 Q86TA4 180 aa12.99□□□□□ -0.33
RPL39-202ENST00000468844 Q8TAT8 98 aa12.99□□□□□ -0.33
RPL39-202ENST00000468844 AGPAT4-IT1Q9H0P7 198 aa12.99□□□□□ -0.33
RPL39-202ENST00000468844 C19orf73Q9NVV2 129 aa12.99□□□□□ -0.33
RPL39-202ENST00000468844 OR11H12B2RN74 326 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 TAS2R60P59551 318 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 OR10J6PQ8NGY7 276 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 GPR61Q9BZJ8 451 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 WFDC10AQ9H1F0 79 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 PSG8Q9UQ74 426 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 C9JCJ5 164 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 NPIPB6E9PJ23 425 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 HOXA5P20719 270 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 PRNTQ86SH4 94 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 FAM110AQ9BQ89 295 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 NAT8Q9UHE5 227 aa12.98□□□□□ -0.33
RPL39-202ENST00000468844 LTAP01374 205 aa12.97□□□□□ -0.33
RPL39-202ENST00000468844 GNG4P50150 75 aa12.97□□□□□ -0.33
RPL39-202ENST00000468844 TMEM78Q5T7P6 136 aa12.97□□□□□ -0.33
RPL39-202ENST00000468844 NHLRC2Q8NBF2 726 aa12.97□□□□□ -0.33
RPL39-202ENST00000468844 CTDSP1Q9GZU7 261 aa12.97□□□□□ -0.33
RPL39-202ENST00000468844 TRBV6-1A0A0K0K1D8 114 aa12.96□□□□□ -0.33
RPL39-202ENST00000468844 KNCNA6PVL3 124 aa12.96□□□□□ -0.33
RPL39-202ENST00000468844 IGLV2-8P01709 118 aa12.96□□□□□ -0.33
RPL39-202ENST00000468844 ACTL10Q5JWF8 245 aa12.96□□□□□ -0.33
RPL39-202ENST00000468844 EBLN2Q6P2I7 272 aa12.96□□□□□ -0.33
RPL39-202ENST00000468844 ZNF492Q9P255 531 aa12.96□□□□□ -0.33
RPL39-202ENST00000468844 NBEAL2Q6ZNJ1 2754 aa12.96□□□□□ -0.34
RPL39-202ENST00000468844 FBLL1A6NHQ2 334 aaKnown RBP12.96□□□□□ -0.34
RPL39-202ENST00000468844 G3V4G9 280 aa12.96□□□□□ -0.34
RPL39-202ENST00000468844 HLA-DRB4P13762 266 aa12.96□□□□□ -0.34
RPL39-202ENST00000468844 TMEM241Q24JQ0 296 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms