RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 CBY3A6NI87 242 aa12.06□□□□□ -0.48
SSBP1-207ENST00000468267 SLC25A5P05141 298 aaKnown RBP12.06□□□□□ -0.48
SSBP1-207ENST00000468267 OR10J4P0C629 311 aa12.06□□□□□ -0.48
SSBP1-207ENST00000468267 CCDC28AQ8IWP9 274 aa12.06□□□□□ -0.48
SSBP1-207ENST00000468267 FAM19A4Q96LR4 140 aa12.06□□□□□ -0.48
SSBP1-207ENST00000468267 NOP10Q9NPE3 64 aaKnown RBP12.06□□□□□ -0.48
SSBP1-207ENST00000468267 FAT2Q9NYQ8 4349 aa12.06□□□□□ -0.48
SSBP1-207ENST00000468267 OR7C2O60412 319 aa12.05□□□□□ -0.48
SSBP1-207ENST00000468267 FAM122CQ6P4D5 195 aa12.05□□□□□ -0.48
SSBP1-207ENST00000468267 ZNF503Q96F45 646 aa12.05□□□□□ -0.48
SSBP1-207ENST00000468267 MED28Q9H204 178 aa12.05□□□□□ -0.48
SSBP1-207ENST00000468267 NACAE9PAV3 2078 aa12.04□□□□□ -0.48
SSBP1-207ENST00000468267 IGKV2-40A0A087WW87 121 aaPredicted RBP12.04□□□□□ -0.48
SSBP1-207ENST00000468267 C7orf71A4D174 169 aa12.04□□□□□ -0.48
SSBP1-207ENST00000468267 KLLNB2CW77 178 aa12.04□□□□□ -0.48
SSBP1-207ENST00000468267 IGKV2D-40P01614 121 aaPredicted RBP12.04□□□□□ -0.48
SSBP1-207ENST00000468267 ATP5G1P05496 136 aa12.04□□□□□ -0.48
SSBP1-207ENST00000468267 ATP5G3P48201 142 aa12.04□□□□□ -0.48
SSBP1-207ENST00000468267 C15orf53Q8NAA6 179 aa12.04□□□□□ -0.48
SSBP1-207ENST00000468267 PHYHIPLQ96FC7 376 aa12.04□□□□□ -0.48
SSBP1-207ENST00000468267 VGLL1Q99990 258 aa12.04□□□□□ -0.48
SSBP1-207ENST00000468267 PYGO2Q9BRQ0 406 aa12.04□□□□□ -0.48
SSBP1-207ENST00000468267 F5H768 121 aa12.03□□□□□ -0.48
SSBP1-207ENST00000468267 ZNF324O75467 553 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-207ENST00000468267 NMBP08949 121 aa12.03□□□□□ -0.48
SSBP1-207ENST00000468267 CRISP2P16562 243 aa12.03□□□□□ -0.48
SSBP1-207ENST00000468267 RNF212Q495C1 297 aa12.03□□□□□ -0.48
SSBP1-207ENST00000468267 TMEM78Q5T7P6 136 aa12.03□□□□□ -0.48
SSBP1-207ENST00000468267 LYPD1Q8N2G4 141 aa12.03□□□□□ -0.48
SSBP1-207ENST00000468267 RNASE4P34096 147 aaKnown RBP12.02□□□□□ -0.49
SSBP1-207ENST00000468267 TAS2R45P59539 299 aa12.02□□□□□ -0.49
SSBP1-207ENST00000468267 RANP62826 216 aaKnown RBP12.02□□□□□ -0.49
SSBP1-207ENST00000468267 CD300CQ08708 224 aa12.02□□□□□ -0.49
SSBP1-207ENST00000468267 KHDC3LQ587J8 217 aa12.02□□□□□ -0.49
SSBP1-207ENST00000468267 UBE2DNLQ8IWF7 75 aa12.02□□□□□ -0.49
SSBP1-207ENST00000468267 LINC00612Q8N6U2 182 aa12.02□□□□□ -0.49
SSBP1-207ENST00000468267 SNURFLB1AK76 121 aa12.01□□□□□ -0.49
SSBP1-207ENST00000468267 GPX1P07203 203 aa12.01□□□□□ -0.49
SSBP1-207ENST00000468267 M6PRP20645 277 aa12.01□□□□□ -0.49
SSBP1-207ENST00000468267 UBE2L3P68036 154 aaKnown RBP12.01□□□□□ -0.49
SSBP1-207ENST00000468267 BTN1A1Q13410 526 aa12.01□□□□□ -0.49
SSBP1-207ENST00000468267 ACOT6Q3I5F7 207 aaPredicted RBP12.01□□□□□ -0.49
SSBP1-207ENST00000468267 LINC00467Q9BRT7 94 aa12.01□□□□□ -0.49
SSBP1-207ENST00000468267 Q9H3A6 140 aa12.01□□□□□ -0.49
SSBP1-207ENST00000468267 ZNF492Q9P255 531 aa12.01□□□□□ -0.49
SSBP1-207ENST00000468267 CSN1S1P47710 185 aa12□□□□□ -0.49
SSBP1-207ENST00000468267 DAZ2Q13117 558 aaKnown RBP12□□□□□ -0.49
SSBP1-207ENST00000468267 ZFAND2AQ8N6M9 145 aa12□□□□□ -0.49
SSBP1-207ENST00000468267 AQP10Q96PS8 301 aa12□□□□□ -0.49
SSBP1-207ENST00000468267 TRBV7-9A0A0J9YWB2 115 aa11.99□□□□□ -0.49
SSBP1-207ENST00000468267 RBAKDNA6NC62 111 aa11.99□□□□□ -0.49
SSBP1-207ENST00000468267 EIF3GO75821 320 aaKnown RBP eCLIP11.99□□□□□ -0.497e-6■□□□□ 9.1
SSBP1-207ENST00000468267 ZNF138P52744 262 aa11.99□□□□□ -0.49
SSBP1-207ENST00000468267 ANXA2RQ3ZCQ2 193 aa11.99□□□□□ -0.49
SSBP1-207ENST00000468267 LCE2AQ5TA79 106 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-207ENST00000468267 ASB13Q8WXK3 278 aa11.99□□□□□ -0.49
SSBP1-207ENST00000468267 MUC4Q99102 2169 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 PKHD1P08F94 4074 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 A0A1W2PPV4 95 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 GAGE12BA1L429 117 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 M0R2N4 97 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 GAGE7O76087 117 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 GIPP09681 153 aaPredicted RBP11.98□□□□□ -0.49
SSBP1-207ENST00000468267 GAGE12FP0CL80 117 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 GAGE12GP0CL81 117 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 GAGE12IP0CL82 117 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 RAB2AP61019 212 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 ZNF266Q14584 549 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 LGALS9BQ3B8N2 356 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 Q5BKY6 102 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 PRR9Q5T870 116 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 PQLC2Q6ZP29 291 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 EIF4E3Q8N5X7 224 aaKnown RBP11.98□□□□□ -0.49
SSBP1-207ENST00000468267 C11orf72Q8NBR9 251 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 ZNF680Q8NEM1 530 aa11.98□□□□□ -0.49
SSBP1-207ENST00000468267 DIRC3C9JPN6 131 aa11.97□□□□□ -0.49
SSBP1-207ENST00000468267 NUDT3O95989 172 aa11.97□□□□□ -0.49
SSBP1-207ENST00000468267 FAM3BP58499 235 aaPredicted RBP11.97□□□□□ -0.49
SSBP1-207ENST00000468267 OR10G4Q8NGN3 311 aa11.97□□□□□ -0.49
SSBP1-207ENST00000468267 OR10G9Q8NGN4 311 aa11.97□□□□□ -0.49
SSBP1-207ENST00000468267 OR10G7Q8NGN6 311 aa11.97□□□□□ -0.49
SSBP1-207ENST00000468267 OR2G3Q8NGZ4 309 aa11.97□□□□□ -0.49
SSBP1-207ENST00000468267 Q8TAT8 98 aa11.97□□□□□ -0.49
SSBP1-207ENST00000468267 RXFP4Q8TDU9 374 aa11.97□□□□□ -0.49
SSBP1-207ENST00000468267 OTORQ9NRC9 128 aa11.97□□□□□ -0.49
SSBP1-207ENST00000468267 GSN-AS1Q9NRJ2 163 aa11.97□□□□□ -0.49
SSBP1-207ENST00000468267 Q6ZQT7 251 aa11.96□□□□□ -0.49
SSBP1-207ENST00000468267 Q6ZTI0 123 aa11.96□□□□□ -0.49
SSBP1-207ENST00000468267 HSD17B11Q8NBQ5 300 aa11.96□□□□□ -0.49
SSBP1-207ENST00000468267 PKD1P98161 4303 aa11.95□□□□□ -0.5
SSBP1-207ENST00000468267 IGLV2-18A0A075B6J9 118 aa11.95□□□□□ -0.5
SSBP1-207ENST00000468267 IGHV1OR15-1A0A075B7D0 117 aa11.95□□□□□ -0.5
SSBP1-207ENST00000468267 PGPA6NDG6 321 aa11.95□□□□□ -0.5
SSBP1-207ENST00000468267 OR5I1Q13606 314 aa11.95□□□□□ -0.5
SSBP1-207ENST00000468267 Q6ZR54 194 aa11.95□□□□□ -0.5
SSBP1-207ENST00000468267 LINC00336Q6ZUF6 198 aa11.95□□□□□ -0.5
SSBP1-207ENST00000468267 HYLS1Q96M11 299 aa11.95□□□□□ -0.5
SSBP1-207ENST00000468267 ATG101Q9BSB4 218 aa11.95□□□□□ -0.5
SSBP1-207ENST00000468267 PSMG3Q9BT73 122 aaPredicted RBP11.95□□□□□ -0.5
SSBP1-207ENST00000468267 RGS13O14921 159 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms