RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 TAS2R60P59551 318 aa14.39□□□□□ -0.11
NPHP4-206ENST00000468253 TMEM78Q5T7P6 136 aa14.39□□□□□ -0.11
NPHP4-206ENST00000468253 CEMP1Q6PRD7 247 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-206ENST00000468253 HYLS1Q96M11 299 aa14.39□□□□□ -0.11
NPHP4-206ENST00000468253 LINC01587Q99440 93 aa14.39□□□□□ -0.11
NPHP4-206ENST00000468253 NUPR2A6NF83 97 aa14.38□□□□□ -0.11
NPHP4-206ENST00000468253 UMAD1C9J7I0 102 aa14.38□□□□□ -0.11
NPHP4-206ENST00000468253 H7BYZ3 331 aa14.38□□□□□ -0.11
NPHP4-206ENST00000468253 CMTM2Q8TAZ6 248 aa14.38□□□□□ -0.11
NPHP4-206ENST00000468253 TMED6Q8WW62 240 aa14.38□□□□□ -0.11
NPHP4-206ENST00000468253 VGLL1Q99990 258 aa14.38□□□□□ -0.11
NPHP4-206ENST00000468253 ZNF471Q9BX82 626 aaPredicted RBP14.38□□□□□ -0.11
NPHP4-206ENST00000468253 ZNF492Q9P255 531 aa14.38□□□□□ -0.11
NPHP4-206ENST00000468253 LENEPQ9Y5L5 61 aa14.38□□□□□ -0.11
NPHP4-206ENST00000468253 TENM2Q9NT68 2774 aa14.38□□□□□ -0.11
NPHP4-206ENST00000468253 STARD9Q9P2P6 4700 aa14.37□□□□□ -0.11
NPHP4-206ENST00000468253 TEX48A0A1B0GUV7 120 aa14.37□□□□□ -0.11
NPHP4-206ENST00000468253 KLLNB2CW77 178 aa14.37□□□□□ -0.11
NPHP4-206ENST00000468253 SPART-AS1P0CW21 52 aa14.37□□□□□ -0.11
NPHP4-206ENST00000468253 ZNF138P52744 262 aa14.37□□□□□ -0.11
NPHP4-206ENST00000468253 NANOS2P60321 138 aaKnown RBP14.37□□□□□ -0.11
NPHP4-206ENST00000468253 ZNF726P1Q15940 193 aa14.37□□□□□ -0.11
NPHP4-206ENST00000468253 LGALSLQ3ZCW2 172 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-206ENST00000468253 AKAP14Q86UN6 197 aa14.37□□□□□ -0.11
NPHP4-206ENST00000468253 PHLDA1Q8WV24 401 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-206ENST00000468253 DYNC2H1Q8NCM8 4307 aaKnown RBP14.36□□□□□ -0.11
NPHP4-206ENST00000468253 IGKV2-40A0A087WW87 121 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-206ENST00000468253 LOC102723971A0A1B0GUV8 181 aa14.36□□□□□ -0.11
NPHP4-206ENST00000468253 PFDN1O60925 122 aa14.36□□□□□ -0.11
NPHP4-206ENST00000468253 IGKV2D-40P01614 121 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-206ENST00000468253 GFI1BQ5VTD9 330 aa14.36□□□□□ -0.11
NPHP4-206ENST00000468253 KLK5Q9Y337 293 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-206ENST00000468253 A0A1W2PRE2 83 aa14.35□□□□□ -0.11
NPHP4-206ENST00000468253 ZNF705GA8MUZ8 300 aaPredicted RBP14.35□□□□□ -0.11
NPHP4-206ENST00000468253 C11orf94C9JXX5 98 aa14.35□□□□□ -0.11
NPHP4-206ENST00000468253 KIR3DS1Q14943 382 aa14.35□□□□□ -0.11
NPHP4-206ENST00000468253 ZNF493Q6ZR52 646 aa14.35□□□□□ -0.11
NPHP4-206ENST00000468253 SSX7Q7RTT5 188 aa14.35□□□□□ -0.11
NPHP4-206ENST00000468253 STOML3Q8TAV4 291 aa14.35□□□□□ -0.11
NPHP4-206ENST00000468253 SERTM2A0A1B0GWG4 89 aa14.34□□□□□ -0.11
NPHP4-206ENST00000468253 TPT1P13693 172 aaKnown RBP14.34□□□□□ -0.11
NPHP4-206ENST00000468253 PMS2P11Q13670 270 aa14.34□□□□□ -0.11
NPHP4-206ENST00000468253 DPPA3Q6W0C5 159 aa14.34□□□□□ -0.11
NPHP4-206ENST00000468253 NIPSNAP3BQ9BS92 247 aa14.34□□□□□ -0.11
NPHP4-206ENST00000468253 NKX6-2Q9C056 277 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-206ENST00000468253 DKK2Q9UBU2 259 aa14.34□□□□□ -0.11
NPHP4-206ENST00000468253 KMT2CQ8NEZ4 4911 aaKnown RBP14.34□□□□□ -0.11
NPHP4-206ENST00000468253 ZNF324O75467 553 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-206ENST00000468253 GPX1P07203 203 aa14.33□□□□□ -0.12
NPHP4-206ENST00000468253 C12orf74Q32Q52 190 aa14.33□□□□□ -0.12
NPHP4-206ENST00000468253 ZFAND2AQ8N6M9 145 aa14.33□□□□□ -0.12
NPHP4-206ENST00000468253 C5orf17Q8NAS9 161 aa14.33□□□□□ -0.12
NPHP4-206ENST00000468253 MBD3L1Q8WWY6 194 aa14.33□□□□□ -0.12
NPHP4-206ENST00000468253 PYGO2Q9BRQ0 406 aa14.33□□□□□ -0.12
NPHP4-206ENST00000468253 LINC00467Q9BRT7 94 aa14.33□□□□□ -0.12
NPHP4-206ENST00000468253 PLA2G2EQ9NZK7 142 aa14.33□□□□□ -0.12
NPHP4-206ENST00000468253 hCG_2014768A0A024R1R8 64 aa14.32□□□□□ -0.12
NPHP4-206ENST00000468253 TRAV12-3A0A0B4J271 114 aa14.32□□□□□ -0.12
NPHP4-206ENST00000468253 C7orf71A4D174 169 aa14.32□□□□□ -0.12
NPHP4-206ENST00000468253 AZU1P20160 251 aa14.32□□□□□ -0.12
NPHP4-206ENST00000468253 EMP1P54849 157 aa14.32□□□□□ -0.12
NPHP4-206ENST00000468253 SUMO1P63165 101 aaKnown RBP14.32□□□□□ -0.12
NPHP4-206ENST00000468253 EIF5AL1Q6IS14 154 aaKnown RBP14.32□□□□□ -0.12
NPHP4-206ENST00000468253 CCDC28AQ8IWP9 274 aa14.32□□□□□ -0.12
NPHP4-206ENST00000468253 CELA1Q9UNI1 258 aa14.32□□□□□ -0.12
NPHP4-206ENST00000468253 YTHDF2Q9Y5A9 579 aaKnown RBP14.32□□□□□ -0.12
NPHP4-206ENST00000468253 LYRM9A8MSI8 78 aa14.31□□□□□ -0.12
NPHP4-206ENST00000468253 PRM2P04554 102 aa14.31□□□□□ -0.12
NPHP4-206ENST00000468253 RNASE4P34096 147 aaKnown RBP14.31□□□□□ -0.12
NPHP4-206ENST00000468253 C16orf74Q96GX8 76 aa14.31□□□□□ -0.12
NPHP4-206ENST00000468253 EPDR1Q9UM22 224 aa14.31□□□□□ -0.12
NPHP4-206ENST00000468253 MAP1LC3B2A6NCE7 125 aa14.3□□□□□ -0.12
NPHP4-206ENST00000468253 RAB5CP51148 216 aa14.3□□□□□ -0.12
NPHP4-206ENST00000468253 CD300CQ08708 224 aa14.3□□□□□ -0.12
NPHP4-206ENST00000468253 FAM222AQ5U5X8 452 aa14.3□□□□□ -0.12
NPHP4-206ENST00000468253 GOLT1AQ6ZVE7 132 aa14.3□□□□□ -0.12
NPHP4-206ENST00000468253 SLC51BQ86UW2 128 aa14.3□□□□□ -0.12
NPHP4-206ENST00000468253 TMEM263Q8WUH6 116 aaKnown RBP14.3□□□□□ -0.12
NPHP4-206ENST00000468253 MAP1LC3BQ9GZQ8 125 aa14.3□□□□□ -0.12
NPHP4-206ENST00000468253 TMPRSS5Q9H3S3 457 aa14.3□□□□□ -0.12
NPHP4-206ENST00000468253 TRAV10A0A0B4J240 114 aa14.29□□□□□ -0.12
NPHP4-206ENST00000468253 PLAC8L1A1L4L8 177 aa14.29□□□□□ -0.12
NPHP4-206ENST00000468253 FBLL1A6NHQ2 334 aaKnown RBP14.29□□□□□ -0.12
NPHP4-206ENST00000468253 J3KRW8 73 aa14.29□□□□□ -0.12
NPHP4-206ENST00000468253 K7EQM0 130 aa14.29□□□□□ -0.12
NPHP4-206ENST00000468253 TCRAP04437 139 aa14.29□□□□□ -0.12
NPHP4-206ENST00000468253 FHITP49789 147 aa14.29□□□□□ -0.12
NPHP4-206ENST00000468253 TCTAP57738 103 aa14.29□□□□□ -0.12
NPHP4-206ENST00000468253 Q6ZTC4 211 aa14.29□□□□□ -0.12
NPHP4-206ENST00000468253 IQCF2Q8IXL9 164 aa14.29□□□□□ -0.12
NPHP4-206ENST00000468253 RNASE8Q8TDE3 154 aaKnown RBP14.29□□□□□ -0.12
NPHP4-206ENST00000468253 C2CD4CQ8TF44 421 aa14.29□□□□□ -0.12
NPHP4-206ENST00000468253 PLECQ15149 4684 aaKnown RBP14.29□□□□□ -0.12
NPHP4-206ENST00000468253 GGTLC3B5MD39 225 aa14.28□□□□□ -0.12
NPHP4-206ENST00000468253 HTN1P15515 57 aa14.28□□□□□ -0.12
NPHP4-206ENST00000468253 FGF8P55075 233 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-206ENST00000468253 TIMM8BQ9Y5J9 83 aaPredicted RBP14.28□□□□□ -0.12
NPHP4-206ENST00000468253 ARL2-SNX15V9GYD0 113 aa14.28□□□□□ -0.12
NPHP4-206ENST00000468253 A0A1B0GVG6 124 aa14.27□□□□□ -0.13
NPHP4-206ENST00000468253 BTN1A1Q13410 526 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms