RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 UBE2CO00762 179 aa11.17□□□□□ -0.62
SNIP1-202ENST00000468040 MEF2BQ02080 365 aaPredicted RBP11.17□□□□□ -0.62
SNIP1-202ENST00000468040 HAGHQ16775 308 aa11.17□□□□□ -0.62
SNIP1-202ENST00000468040 AMTNQ6UX39 209 aa11.17□□□□□ -0.62
SNIP1-202ENST00000468040 VGLL1Q99990 258 aa11.17□□□□□ -0.62
SNIP1-202ENST00000468040 C1QTNF4Q9BXJ3 329 aa11.17□□□□□ -0.62
SNIP1-202ENST00000468040 AGPAT4-IT1Q9H0P7 198 aa11.17□□□□□ -0.62
SNIP1-202ENST00000468040 CA1P00915 261 aaPredicted RBP11.16□□□□□ -0.62
SNIP1-202ENST00000468040 AMBPP02760 352 aa11.16□□□□□ -0.62
SNIP1-202ENST00000468040 TSPOP30536 169 aa11.16□□□□□ -0.62
SNIP1-202ENST00000468040 ZNF138P52744 262 aa11.16□□□□□ -0.62
SNIP1-202ENST00000468040 ERCC8Q13216 396 aa11.16□□□□□ -0.62
SNIP1-202ENST00000468040 PCNPQ8WW12 178 aaKnown RBP11.16□□□□□ -0.62
SNIP1-202ENST00000468040 B9D2Q9BPU9 175 aa11.16□□□□□ -0.62
SNIP1-202ENST00000468040 AGRNO00468 2067 aa11.15□□□□□ -0.62
SNIP1-202ENST00000468040 TRBV7-9A0A0J9YWB2 115 aa11.15□□□□□ -0.62
SNIP1-202ENST00000468040 LOC102723971A0A1B0GUV8 181 aa11.15□□□□□ -0.62
SNIP1-202ENST00000468040 RBFOX3A6NFN3 312 aa11.15□□□□□ -0.62
SNIP1-202ENST00000468040 PDE6DO43924 150 aa11.15□□□□□ -0.62
SNIP1-202ENST00000468040 CT45A10P0DMU9 189 aa11.15□□□□□ -0.62
SNIP1-202ENST00000468040 LEPP41159 167 aa11.15□□□□□ -0.62
SNIP1-202ENST00000468040 TMEM75Q8N9X5 138 aa11.15□□□□□ -0.62
SNIP1-202ENST00000468040 SLC35B3Q9H1N7 401 aa11.15□□□□□ -0.62
SNIP1-202ENST00000468040 ZNF492Q9P255 531 aa11.15□□□□□ -0.62
SNIP1-202ENST00000468040 LENEPQ9Y5L5 61 aa11.15□□□□□ -0.62
SNIP1-202ENST00000468040 CDKN1BP46527 198 aa11.14□□□□□ -0.63
SNIP1-202ENST00000468040 SPINK13Q1W4C9 94 aa11.14□□□□□ -0.63
SNIP1-202ENST00000468040 CLLU1Q5K131 121 aa11.14□□□□□ -0.63
SNIP1-202ENST00000468040 Q6ZWC4 215 aa11.14□□□□□ -0.63
SNIP1-202ENST00000468040 FAM210AQ96ND0 272 aa11.14□□□□□ -0.63
SNIP1-202ENST00000468040 DNAH3Q8TD57 4116 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 TRAV8-1A0A0A6YYK1 113 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 SCO2A0A1W2PP80 73 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 M0R2Z0 102 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 GIG44P09565 113 aaPredicted RBP11.13□□□□□ -0.63
SNIP1-202ENST00000468040 AKR1C3P42330 323 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 FXYD7P58549 80 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 FLI1Q01543 452 aaPredicted RBP11.13□□□□□ -0.63
SNIP1-202ENST00000468040 ZNF506Q5JVG8 444 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 SBSPONQ8IVN8 264 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 Q8TAT8 98 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 C11orf52Q96A22 123 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 FMC1Q96HJ9 113 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 FAM19A4Q96LR4 140 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 NDFIP1Q9BT67 221 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 EIF5A2Q9GZV4 153 aaKnown RBP11.13□□□□□ -0.63
SNIP1-202ENST00000468040 XCL2Q9UBD3 114 aa11.13□□□□□ -0.63
SNIP1-202ENST00000468040 RGS13O14921 159 aa11.12□□□□□ -0.63
SNIP1-202ENST00000468040 S100A9P06702 114 aaKnown RBP11.12□□□□□ -0.63
SNIP1-202ENST00000468040 CRISP2P16562 243 aa11.12□□□□□ -0.63
SNIP1-202ENST00000468040 UBE2G1P62253 170 aa11.12□□□□□ -0.63
SNIP1-202ENST00000468040 TOR2AQ5JU69 321 aa11.12□□□□□ -0.63
SNIP1-202ENST00000468040 C2CD4CQ8TF44 421 aa11.12□□□□□ -0.63
SNIP1-202ENST00000468040 RARRES2Q99969 163 aa11.12□□□□□ -0.63
SNIP1-202ENST00000468040 PSG8Q9UQ74 426 aa11.12□□□□□ -0.63
SNIP1-202ENST00000468040 KLF12Q9Y4X4 402 aa11.12□□□□□ -0.63
SNIP1-202ENST00000468040 NDUFS6O75380 124 aaKnown RBP11.11□□□□□ -0.63
SNIP1-202ENST00000468040 INSP01308 110 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 IGLV2-11P01706 119 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 TMEM183BQ1AE95 376 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 SAPCD1Q5SSQ6 148 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 SGK494Q96LW2 274 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 IGF2BP2-AS1Q96M15 143 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 LINC00479Q96M42 142 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 RCHY1Q96PM5 261 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 ASCL2Q99929 193 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 SPATA25Q9BR10 227 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 TM2D3Q9BRN9 247 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 TP53TG1Q9Y2A0 90 aa11.11□□□□□ -0.63
SNIP1-202ENST00000468040 MEGF8Q7Z7M0 2845 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 TRAV34A0A0B4J273 112 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 TRBV6-1A0A0K0K1D8 114 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 KLLNB2CW77 178 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 CRXO43186 299 aaPredicted RBP11.1□□□□□ -0.63
SNIP1-202ENST00000468040 GPX1P07203 203 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 DEFB135Q30KP9 77 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 PRNTQ86SH4 94 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 Q86TA4 180 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 CSNK1G2-AS1Q8NCQ2 148 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 C20orf144Q9BQM9 153 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 ZMAT4Q9H898 229 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 TREM1Q9NP99 234 aa11.1□□□□□ -0.63
SNIP1-202ENST00000468040 TRAV12-2A0A075B6T6 113 aa11.09□□□□□ -0.63
SNIP1-202ENST00000468040 TMEM250H0YL14 139 aa11.09□□□□□ -0.63
SNIP1-202ENST00000468040 NHLRC4P0CG21 123 aaPredicted RBP11.09□□□□□ -0.63
SNIP1-202ENST00000468040 PEA15Q15121 130 aa11.09□□□□□ -0.63
SNIP1-202ENST00000468040 GFI1BQ5VTD9 330 aa11.09□□□□□ -0.63
SNIP1-202ENST00000468040 ZFAND2AQ8N6M9 145 aa11.09□□□□□ -0.63
SNIP1-202ENST00000468040 RNF183Q96D59 192 aa11.09□□□□□ -0.63
SNIP1-202ENST00000468040 SMDT1Q9H4I9 107 aa11.09□□□□□ -0.63
SNIP1-202ENST00000468040 MED9Q9NWA0 146 aa11.09□□□□□ -0.63
SNIP1-202ENST00000468040 ZFP30Q9Y2G7 519 aa11.09□□□□□ -0.63
SNIP1-202ENST00000468040 GOLT1BQ9Y3E0 138 aa11.09□□□□□ -0.63
SNIP1-202ENST00000468040 FBN3Q75N90 2809 aa11.08□□□□□ -0.63
SNIP1-202ENST00000468040 C7orf71A4D174 169 aa11.08□□□□□ -0.64
SNIP1-202ENST00000468040 J3KRW8 73 aa11.08□□□□□ -0.64
SNIP1-202ENST00000468040 SPRY2O43597 315 aa11.08□□□□□ -0.64
SNIP1-202ENST00000468040 RPL35P42766 123 aaKnown RBP11.08□□□□□ -0.64
SNIP1-202ENST00000468040 TAS2R60P59551 318 aa11.08□□□□□ -0.64
SNIP1-202ENST00000468040 TMEM256Q8N2U0 113 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms