RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 DNAH10Q8IVF4 4471 aa10.74□□□□□ -0.69
ATG4B-215ENST00000468018 ZNF324O75467 553 aaPredicted RBP10.73□□□□□ -0.69
ATG4B-215ENST00000468018 SLC25A5P05141 298 aaKnown RBP10.73□□□□□ -0.69
ATG4B-215ENST00000468018 NMBP08949 121 aa10.73□□□□□ -0.69
ATG4B-215ENST00000468018 ATP6V0CP27449 155 aa10.73□□□□□ -0.69
ATG4B-215ENST00000468018 UBE2L3P68036 154 aaKnown RBP10.73□□□□□ -0.69
ATG4B-215ENST00000468018 FAM122CQ6P4D5 195 aa10.73□□□□□ -0.69
ATG4B-215ENST00000468018 PQLC2Q6ZP29 291 aa10.73□□□□□ -0.69
ATG4B-215ENST00000468018 ZFAND2AQ8N6M9 145 aa10.73□□□□□ -0.69
ATG4B-215ENST00000468018 LINC00612Q8N6U2 182 aa10.73□□□□□ -0.69
ATG4B-215ENST00000468018 OR2T35Q8NGX2 323 aa10.73□□□□□ -0.69
ATG4B-215ENST00000468018 VGLL1Q99990 258 aa10.73□□□□□ -0.69
ATG4B-215ENST00000468018 Q9H3A6 140 aa10.73□□□□□ -0.69
ATG4B-215ENST00000468018 NACAE9PAV3 2078 aa10.73□□□□□ -0.69
ATG4B-215ENST00000468018 IGKV2-40A0A087WW87 121 aaPredicted RBP10.72□□□□□ -0.69
ATG4B-215ENST00000468018 TRBV7-9A0A0J9YWB2 115 aa10.72□□□□□ -0.69
ATG4B-215ENST00000468018 RBAKDNA6NC62 111 aa10.72□□□□□ -0.69
ATG4B-215ENST00000468018 EIF3GO75821 320 aaKnown RBP eCLIP10.72□□□□□ -0.69
ATG4B-215ENST00000468018 IGKV2D-40P01614 121 aaPredicted RBP10.72□□□□□ -0.69
ATG4B-215ENST00000468018 DAD1P61803 113 aa10.72□□□□□ -0.69
ATG4B-215ENST00000468018 SERF2P84101 59 aa10.72□□□□□ -0.69
ATG4B-215ENST00000468018 HSD17B11Q8NBQ5 300 aa10.72□□□□□ -0.69
ATG4B-215ENST00000468018 PYGO2Q9BRQ0 406 aa10.72□□□□□ -0.69
ATG4B-215ENST00000468018 LINC00467Q9BRT7 94 aa10.72□□□□□ -0.69
ATG4B-215ENST00000468018 NDUFAF3Q9BU61 184 aa10.72□□□□□ -0.69
ATG4B-215ENST00000468018 TRAV12-3A0A0B4J271 114 aa10.71□□□□□ -0.69
ATG4B-215ENST00000468018 C7orf71A4D174 169 aa10.71□□□□□ -0.69
ATG4B-215ENST00000468018 STAG3L2P0CL84 134 aa10.71□□□□□ -0.69
ATG4B-215ENST00000468018 STAG3L3P0CL85 134 aa10.71□□□□□ -0.69
ATG4B-215ENST00000468018 RANP62826 216 aaKnown RBP10.71□□□□□ -0.69
ATG4B-215ENST00000468018 FRAS1Q86XX4 4008 aa10.71□□□□□ -0.69
ATG4B-215ENST00000468018 ARL6IP6Q8N6S5 226 aa10.71□□□□□ -0.69
ATG4B-215ENST00000468018 OR10G4Q8NGN3 311 aa10.71□□□□□ -0.69
ATG4B-215ENST00000468018 OR10G9Q8NGN4 311 aa10.71□□□□□ -0.69
ATG4B-215ENST00000468018 OR10G7Q8NGN6 311 aa10.71□□□□□ -0.69
ATG4B-215ENST00000468018 SUN5Q8TC36 379 aa10.71□□□□□ -0.69
ATG4B-215ENST00000468018 TIMM8BQ9Y5J9 83 aaPredicted RBP10.71□□□□□ -0.69
ATG4B-215ENST00000468018 FXYD6-FXYD2A0A087WZ82 144 aa10.7□□□□□ -0.7
ATG4B-215ENST00000468018 DIRC3C9JPN6 131 aa10.7□□□□□ -0.7
ATG4B-215ENST00000468018 J3KRW8 73 aa10.7□□□□□ -0.7
ATG4B-215ENST00000468018 CDC34P49427 236 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-215ENST00000468018 CD300CQ08708 224 aa10.7□□□□□ -0.7
ATG4B-215ENST00000468018 TMEM78Q5T7P6 136 aa10.7□□□□□ -0.7
ATG4B-215ENST00000468018 PRR9Q5T870 116 aa10.7□□□□□ -0.7
ATG4B-215ENST00000468018 INO80EQ8NBZ0 244 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-215ENST00000468018 SH3BGRL3Q9H299 93 aa10.7□□□□□ -0.7
ATG4B-215ENST00000468018 OTORQ9NRC9 128 aa10.7□□□□□ -0.7
ATG4B-215ENST00000468018 A0A1W2PPV4 95 aa10.69□□□□□ -0.7
ATG4B-215ENST00000468018 HTN1P15515 57 aa10.69□□□□□ -0.7
ATG4B-215ENST00000468018 BTN1A1Q13410 526 aa10.69□□□□□ -0.7
ATG4B-215ENST00000468018 ANXA2RQ3ZCQ2 193 aa10.69□□□□□ -0.7
ATG4B-215ENST00000468018 RPL7L1Q6DKI1 246 aaKnown RBP10.69□□□□□ -0.7
ATG4B-215ENST00000468018 C11orf72Q8NBR9 251 aa10.69□□□□□ -0.7
ATG4B-215ENST00000468018 RXFP4Q8TDU9 374 aa10.69□□□□□ -0.7
ATG4B-215ENST00000468018 TMED6Q8WW62 240 aa10.69□□□□□ -0.7
ATG4B-215ENST00000468018 MUC4Q99102 2169 aa10.69□□□□□ -0.7
ATG4B-215ENST00000468018 MBP02144 154 aa10.68□□□□□ -0.7
ATG4B-215ENST00000468018 ZNF138P52744 262 aa10.68□□□□□ -0.7
ATG4B-215ENST00000468018 RAB24Q969Q5 203 aa10.68□□□□□ -0.7
ATG4B-215ENST00000468018 NOP10Q9NPE3 64 aaKnown RBP10.68□□□□□ -0.7
ATG4B-215ENST00000468018 LENEPQ9Y5L5 61 aa10.68□□□□□ -0.7
ATG4B-215ENST00000468018 CBY3A6NI87 242 aa10.67□□□□□ -0.7
ATG4B-215ENST00000468018 HMGB3O15347 200 aaKnown RBP10.67□□□□□ -0.7
ATG4B-215ENST00000468018 GPX1P07203 203 aa10.67□□□□□ -0.7
ATG4B-215ENST00000468018 ARL14EPLP0DKL9 152 aa10.67□□□□□ -0.7
ATG4B-215ENST00000468018 DEFB130BP0DP73 79 aa10.67□□□□□ -0.7
ATG4B-215ENST00000468018 DEFB130AP0DP74 79 aa10.67□□□□□ -0.7
ATG4B-215ENST00000468018 CSN1S1P47710 185 aa10.67□□□□□ -0.7
ATG4B-215ENST00000468018 DAZ2Q13117 558 aaKnown RBP10.67□□□□□ -0.7
ATG4B-215ENST00000468018 TMEM88Q6PEY1 159 aa10.67□□□□□ -0.7
ATG4B-215ENST00000468018 SSX7Q7RTT5 188 aa10.67□□□□□ -0.7
ATG4B-215ENST00000468018 CCDC28AQ8IWP9 274 aa10.67□□□□□ -0.7
ATG4B-215ENST00000468018 Q8TAT8 98 aa10.67□□□□□ -0.7
ATG4B-215ENST00000468018 GNPNAT1Q96EK6 184 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-215ENST00000468018 CYTL1Q9NRR1 136 aa10.67□□□□□ -0.7
ATG4B-215ENST00000468018 BIRC6Q9NR09 4857 aa10.66□□□□□ -0.7
ATG4B-215ENST00000468018 PGPA6NDG6 321 aa10.66□□□□□ -0.7
ATG4B-215ENST00000468018 P0DMU3 169 aa10.66□□□□□ -0.7
ATG4B-215ENST00000468018 FAM231AP0DMU4 169 aa10.66□□□□□ -0.7
ATG4B-215ENST00000468018 FAM231CP0DMU5 169 aa10.66□□□□□ -0.7
ATG4B-215ENST00000468018 Q6ZQT7 251 aa10.66□□□□□ -0.7
ATG4B-215ENST00000468018 EIF4E3Q8N5X7 224 aaKnown RBP10.66□□□□□ -0.7
ATG4B-215ENST00000468018 DNAH2Q9P225 4427 aa10.66□□□□□ -0.7
ATG4B-215ENST00000468018 TAAR5O14804 337 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 ARPC5O15511 151 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 ATP5G1P05496 136 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 HTN3P15516 51 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 GCHFRP30047 84 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 RNASE4P34096 147 aaKnown RBP10.65□□□□□ -0.7
ATG4B-215ENST00000468018 ATP5G3P48201 142 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 ZNF345Q14585 488 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 Q6AWC8 147 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 POM121L12Q8N7R1 296 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 ZNF680Q8NEM1 530 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 ST6GAL2Q96JF0 529 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 C18orf15Q96N68 181 aa10.65□□□□□ -0.7
ATG4B-215ENST00000468018 BORCS7-ASMTA0A0B4J1R7 106 aa10.64□□□□□ -0.71
ATG4B-215ENST00000468018 SNURFLB1AK76 121 aa10.64□□□□□ -0.71
ATG4B-215ENST00000468018 SMLR1H3BR10 107 aa10.64□□□□□ -0.71
ATG4B-215ENST00000468018 ZNF726P1Q15940 193 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms