RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 WIPF1O43516 503 aa11.15□□□□□ -0.62
DDX56-208ENST00000467318 EDN2P20800 178 aa11.15□□□□□ -0.62
DDX56-208ENST00000467318 UBE2L3P68036 154 aaKnown RBP11.15□□□□□ -0.62
DDX56-208ENST00000467318 PAFAH1B2P68402 229 aa11.15□□□□□ -0.62
DDX56-208ENST00000467318 DEFB114Q30KQ6 69 aa11.15□□□□□ -0.62
DDX56-208ENST00000467318 FAM167A-AS1Q96KT0 104 aa11.15□□□□□ -0.62
DDX56-208ENST00000467318 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
DDX56-208ENST00000467318 V9GYV3 84 aa11.15□□□□□ -0.62
DDX56-208ENST00000467318 IGHV3OR16-13A0A075B7E8 117 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 IGHV3-74A0A0B4J1X5 117 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 IGLV1-51P01701 117 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 IGLL1P15814 213 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 C16orf54Q6UWD8 224 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 OR8I2Q8N0Y5 310 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 OR2K2Q8NGT1 345 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 GPR82Q96P67 336 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 NOTCH3Q9UM47 2321 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 GZMBP10144 247 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 IQCJQ1A5X6 159 aa11.14□□□□□ -0.63
DDX56-208ENST00000467318 TRAV25A0A0B4J276 109 aa11.13□□□□□ -0.63
DDX56-208ENST00000467318 GGTLC3B5MD39 225 aa11.13□□□□□ -0.63
DDX56-208ENST00000467318 RPL7P18124 248 aaKnown RBP11.13□□□□□ -0.63
DDX56-208ENST00000467318 RBPMS2Q6ZRY4 209 aaKnown RBP11.13□□□□□ -0.63
DDX56-208ENST00000467318 FAM231DQ6ZW35 169 aa11.13□□□□□ -0.63
DDX56-208ENST00000467318 GLMPQ8WWB7 406 aa11.13□□□□□ -0.63
DDX56-208ENST00000467318 SMIM12Q96EX1 92 aa11.13□□□□□ -0.63
DDX56-208ENST00000467318 MRPL18Q9H0U6 180 aaKnown RBP11.13□□□□□ -0.63
DDX56-208ENST00000467318 SELENOKQ9Y6D0 94 aa11.13□□□□□ -0.63
DDX56-208ENST00000467318 SLC17A3O00476 420 aa11.12□□□□□ -0.63
DDX56-208ENST00000467318 ESDP10768 282 aa11.12□□□□□ -0.63
DDX56-208ENST00000467318 RANP62826 216 aaKnown RBP11.12□□□□□ -0.63
DDX56-208ENST00000467318 Q0VG73 95 aa11.12□□□□□ -0.63
DDX56-208ENST00000467318 CD300EQ496F6 205 aaPredicted RBP11.12□□□□□ -0.63
DDX56-208ENST00000467318 TCF24Q7RTU0 167 aa11.12□□□□□ -0.63
DDX56-208ENST00000467318 IGF2BP2-AS1Q96M15 143 aa11.12□□□□□ -0.63
DDX56-208ENST00000467318 CRISP2P16562 243 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 IBA57Q5T440 356 aaKnown RBP11.11□□□□□ -0.63
DDX56-208ENST00000467318 LEMD1Q68G75 181 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 LCN12Q6JVE5 192 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 RASL11AQ6T310 242 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 SIGLEC15Q6ZMC9 328 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 BPIFA4PQ86YQ2 179 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 ZMAT5Q9UDW3 170 aaKnown RBP11.11□□□□□ -0.63
DDX56-208ENST00000467318 TRAV5A0A0B4J249 113 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 DDTP30046 118 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 RPL11P62913 178 aaKnown RBP11.11□□□□□ -0.63
DDX56-208ENST00000467318 OR5I1Q13606 314 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 OXLD1Q5BKU9 147 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 MORN5Q5VZ52 161 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 TMEM61Q8N0U2 210 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 CMTM2Q8TAZ6 248 aa11.11□□□□□ -0.63
DDX56-208ENST00000467318 SMIM27A0A1W2PRY6 76 aa11.1□□□□□ -0.63
DDX56-208ENST00000467318 PEX7O00628 323 aa11.1□□□□□ -0.63
DDX56-208ENST00000467318 IGLV2-8P01709 118 aa11.1□□□□□ -0.63
DDX56-208ENST00000467318 MGST1P10620 155 aaKnown RBP11.1□□□□□ -0.63
DDX56-208ENST00000467318 CDPF1Q6NVV7 123 aa11.1□□□□□ -0.63
DDX56-208ENST00000467318 IZUMO1RA6ND01 250 aa11.09□□□□□ -0.63
DDX56-208ENST00000467318 ZNF705GA8MUZ8 300 aaPredicted RBP11.09□□□□□ -0.63
DDX56-208ENST00000467318 SNURFLB1AK76 121 aa11.09□□□□□ -0.63
DDX56-208ENST00000467318 HLA-DQA1P01909 254 aa11.09□□□□□ -0.63
DDX56-208ENST00000467318 FXYD5Q96DB9 178 aa11.09□□□□□ -0.63
DDX56-208ENST00000467318 SPAG8Q99932 426 aaPredicted RBP11.09□□□□□ -0.63
DDX56-208ENST00000467318 TMEM14CQ9P0S9 112 aa11.09□□□□□ -0.63
DDX56-208ENST00000467318 CMYA5Q8N3K9 4069 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 TMEM183BQ1AE95 376 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 LBHQ53QV2 105 aaPredicted RBP11.08□□□□□ -0.64
DDX56-208ENST00000467318 SAMD5Q5TGI4 173 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 BAGE2Q86Y30 109 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 NRN1Q9NPD7 142 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 ZNF331Q9NQX6 463 aaPredicted RBP11.08□□□□□ -0.64
DDX56-208ENST00000467318 TRAV2A0A0B4J234 112 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 ZNF785A8K8V0 405 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 MRPS12O15235 138 aaKnown RBP11.08□□□□□ -0.64
DDX56-208ENST00000467318 UBE2G1P62253 170 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 EGFEM1PQ0D2K5 195 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 OR10J3Q5JRS4 329 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 SAMD13Q5VXD3 122 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 BAGE3Q86Y29 109 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 RNASE7Q9H1E1 156 aaKnown RBP11.08□□□□□ -0.64
DDX56-208ENST00000467318 MS4A6AQ9H2W1 248 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 EPDR1Q9UM22 224 aa11.08□□□□□ -0.64
DDX56-208ENST00000467318 MGAM2Q2M2H8 2515 aa11.07□□□□□ -0.64
DDX56-208ENST00000467318 IGKV3-7A0A075B6H7 116 aa11.07□□□□□ -0.64
DDX56-208ENST00000467318 SCGB1D1O95968 90 aa11.07□□□□□ -0.64
DDX56-208ENST00000467318 NBEAP1P0C6P0 100 aa11.07□□□□□ -0.64
DDX56-208ENST00000467318 PYYP10082 97 aa11.07□□□□□ -0.64
DDX56-208ENST00000467318 HIST1H1EP10412 219 aaKnown RBP11.07□□□□□ -0.64
DDX56-208ENST00000467318 TMEM256Q8N2U0 113 aa11.07□□□□□ -0.64
DDX56-208ENST00000467318 NAT8BQ9UHF3 227 aa11.07□□□□□ -0.64
DDX56-208ENST00000467318 KLF12Q9Y4X4 402 aa11.07□□□□□ -0.64
DDX56-208ENST00000467318 SMAD5-AS1Q9Y6J3 95 aa11.07□□□□□ -0.64
DDX56-208ENST00000467318 A0A087X0K7 114 aa11.06□□□□□ -0.64
DDX56-208ENST00000467318 OR4C46A6NHA9 309 aa11.06□□□□□ -0.64
DDX56-208ENST00000467318 G3V4G9 280 aa11.06□□□□□ -0.64
DDX56-208ENST00000467318 SLC25A5P05141 298 aaKnown RBP11.06□□□□□ -0.64
DDX56-208ENST00000467318 GP9P14770 177 aa11.06□□□□□ -0.64
DDX56-208ENST00000467318 RAB4BP61018 213 aa11.06□□□□□ -0.64
DDX56-208ENST00000467318 TMEM136Q6ZRR5 245 aa11.06□□□□□ -0.64
DDX56-208ENST00000467318 NAGKQ9UJ70 344 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms