RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 SMIM29Q86T20 159 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 TRPT1Q86TN4 253 aaKnown RBP3.8□□□□□ -1.8
PTCD3-207ENST00000467273 OR10G4Q8NGN3 311 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 ZNRF2Q8NHG8 242 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 RPUSD4Q96CM3 377 aaKnown RBP3.8□□□□□ -1.8
PTCD3-207ENST00000467273 DIRAS2Q96HU8 199 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 NARS2Q96I59 477 aaKnown RBP3.8□□□□□ -1.8
PTCD3-207ENST00000467273 PDCD10Q9BUL8 212 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 RHPN1-AS1Q9BWJ2 59 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 GABARAPL3Q9BY60 117 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 GABARAPL1Q9H0R8 117 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 OR2D2Q9H210 308 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 OR51E2Q9H255 320 aa3.8□□□□□ -1.8
PTCD3-207ENST00000467273 A0A087WX48 190 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 A0A087WZ39 114 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 IGHV3-35A0A0C4DH35 117 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 IGHV7-4-1A0A0J9YVY3 117 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 FAM240AA0A1B0GVK7 77 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 KBTBD11O94819 623 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 GNB3P16520 340 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 DDTP30046 118 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 DEFB131AP59861 70 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 HSPE1P61604 102 aaKnown RBP3.79□□□□□ -1.8
PTCD3-207ENST00000467273 RPS27AP62979 156 aaKnown RBP3.79□□□□□ -1.8
PTCD3-207ENST00000467273 CLINT1Q14677 625 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 Q499Y3 187 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 FAM162BQ5T6X4 162 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 GFI1BQ5VTD9 330 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 FA2HQ7L5A8 372 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 PRSS48Q7RTY5 328 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 HSD17B13Q7Z5P4 300 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-207ENST00000467273 STPG4Q8N801 248 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 ZNF485Q8NCK3 441 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 OR5H6Q8NGV6 325 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 TMEM167AQ8TBQ9 72 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 ZNF486Q96H40 463 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-207ENST00000467273 PGLYRP3Q96LB9 341 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 TM2D1Q9BX74 207 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 Q9HAA7 133 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 SPANXCQ9NY87 97 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 S4R3C0 116 aa3.79□□□□□ -1.8
PTCD3-207ENST00000467273 IGKV1-6A0A0C4DH72 117 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 TCRBV3S1A0A5B6 114 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 OR2T8A6NH00 312 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 IFITM10A6NMD0 228 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 DNASE2O00115 360 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-207ENST00000467273 GYG2O15488 501 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 REG1AP05451 166 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 LINC01547P58512 204 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-207ENST00000467273 PKIAP61925 76 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 MRPS10P82664 201 aaKnown RBP3.78□□□□□ -1.8
PTCD3-207ENST00000467273 CDNFQ49AH0 187 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 C1orf194Q5T5A4 169 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 Q6ZVQ6 151 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 ZNF767PQ75MW2 155 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 C1orf158Q8N1D5 194 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 SFT2D1Q8WV19 159 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 ZNF414Q96IQ9 312 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 SCRT1Q9BWW7 348 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 TMEM126AQ9H061 195 aa3.78□□□□□ -1.8
PTCD3-207ENST00000467273 FAT1Q14517 4588 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 TRBV6-7A0A0A0MS04 114 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 TRAV14DV4A0A0A6YYC5 116 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 C20orf202A1L168 122 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 E7EUB6 86 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 HPRT1P00492 218 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 HRASP01112 189 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 EIF4EP06730 217 aaKnown RBP3.77□□□□□ -1.81
PTCD3-207ENST00000467273 PFN1P07737 140 aaKnown RBP3.77□□□□□ -1.81
PTCD3-207ENST00000467273 SUB1P53999 127 aaKnown RBP eCLIP3.77□□□□□ -1.81
PTCD3-207ENST00000467273 CCL18P55774 89 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 HERV-K104P61576 105 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 RPL36AP83881 106 aaKnown RBP3.77□□□□□ -1.81
PTCD3-207ENST00000467273 BAXQ07812 192 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 ZNF726P1Q15940 193 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 CNPY1Q3B7I2 92 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 AKR1C8PQ5T2L2 129 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 Q6ZVH6 145 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 GDPD1Q8N9F7 314 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 TCTEX1D2Q8WW35 142 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 LINC00477Q96M19 166 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 Q9H3A6 140 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 C21orf62Q9NYP8 219 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 HSPB8Q9UJY1 196 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 VPS13BQ7Z7G8 4022 aa3.77□□□□□ -1.81
PTCD3-207ENST00000467273 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 IGKV3-7A0A075B6H7 116 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 BORCS7-ASMTA0A0B4J1R7 106 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 IGLC7A0M8Q6 106 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 A6NDN8 102 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 FOXI3A8MTJ6 420 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-207ENST00000467273 ZNF705FA8MVS1 300 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-207ENST00000467273 TMEM14DPA8MWL7 114 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 SNURFLB1AK76 121 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 SMIM1B2RUZ4 78 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 F6UZH7 168 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 CTSGP08311 255 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 OR5G3P0C626 314 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 ZNF705DP0CH99 300 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-207ENST00000467273 ZNF705BP0CI00 300 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms