RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 DNAJC4Q9NNZ3 241 aa6.94□□□□□ -1.3
GPNMB-206ENST00000465673 RCL1Q9Y2P8 373 aaKnown RBP6.94□□□□□ -1.3
GPNMB-206ENST00000465673 V9GYH0 126 aa6.94□□□□□ -1.3
GPNMB-206ENST00000465673 DNAH8Q96JB1 4490 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 TRAV9-2A0A087WT02 112 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 IGKV2-40A0A087WW87 121 aaPredicted RBP6.93□□□□□ -1.3
GPNMB-206ENST00000465673 IGLV5-52A0A0A0MRZ9 124 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 LRCOL1A6NCL2 159 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 K7EQD1 137 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 MPDU1O75352 247 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 NDUFB4O95168 129 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 IGKV2D-40P01614 121 aaPredicted RBP6.93□□□□□ -1.3
GPNMB-206ENST00000465673 OR4E1P0C645 316 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 AP3S2P59780 193 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 UBE2MP61081 183 aaKnown RBP6.93□□□□□ -1.3
GPNMB-206ENST00000465673 NRARPQ7Z6K4 114 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 EXOC3-AS1Q8N2X6 119 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 ZNF479Q96JC4 524 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 MRPS26Q9BYN8 205 aaKnown RBP6.93□□□□□ -1.3
GPNMB-206ENST00000465673 GSKIPQ9P0R6 139 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 RNF24Q9Y225 148 aa6.93□□□□□ -1.3
GPNMB-206ENST00000465673 C7orf66A4D0T2 115 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 RGS13O14921 159 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 TSC22D2O75157 780 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 GPX1P07203 203 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 PYYP10082 97 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 EVI2AP22794 236 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 CAMLGP49069 296 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 ZNF415Q09FC8 603 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 IAH1Q2TAA2 248 aaPredicted RBP6.92□□□□□ -1.3
GPNMB-206ENST00000465673 ZFAND2AQ8N6M9 145 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 VGLL1Q99990 258 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 MRPL32Q9BYC8 188 aaKnown RBP6.92□□□□□ -1.3
GPNMB-206ENST00000465673 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 KRTAP3-2Q9BYR7 98 aa6.92□□□□□ -1.3
GPNMB-206ENST00000465673 TRBV19A0A075B6N1 114 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 IGHV1OR15-1A0A075B7D0 117 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 TRGV4A0A0C4DH28 118 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 LOC100131303A0A0U1RQF7 123 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 H3BMQ9 156 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 CST7O76096 145 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 MBPP02686 304 aaPredicted RBP6.91□□□□□ -1.3
GPNMB-206ENST00000465673 CRYGDP07320 174 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 GYPEP15421 78 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 SRIP30626 198 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 TMBIM6P55061 237 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 GUK1Q16774 197 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 C4orf46Q504U0 113 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 MUC21Q5SSG8 566 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 IBA57Q5T440 356 aaKnown RBP6.91□□□□□ -1.3
GPNMB-206ENST00000465673 Q6ZRG5 221 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 BLNKQ8WV28 456 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 LINC00477Q96M19 166 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 TMEM70Q9BUB7 260 aa6.91□□□□□ -1.3
GPNMB-206ENST00000465673 CCSO14618 274 aa6.9□□□□□ -1.3
GPNMB-206ENST00000465673 CRISP2P16562 243 aa6.9□□□□□ -1.3
GPNMB-206ENST00000465673 TAS2R30P59541 319 aa6.9□□□□□ -1.3
GPNMB-206ENST00000465673 GCSAMLQ5JQS6 135 aa6.9□□□□□ -1.3
GPNMB-206ENST00000465673 FAM122CQ6P4D5 195 aa6.9□□□□□ -1.3
GPNMB-206ENST00000465673 Q8TAT8 98 aa6.9□□□□□ -1.3
GPNMB-206ENST00000465673 MRPL53Q96EL3 112 aaKnown RBP6.9□□□□□ -1.3
GPNMB-206ENST00000465673 ARPC5LQ9BPX5 153 aa6.9□□□□□ -1.3
GPNMB-206ENST00000465673 GGACTQ9BVM4 153 aa6.9□□□□□ -1.3
GPNMB-206ENST00000465673 TIMM9Q9Y5J7 89 aa6.9□□□□□ -1.3
GPNMB-206ENST00000465673 FAM24AA6NFZ4 105 aa6.89□□□□□ -1.31
GPNMB-206ENST00000465673 PSCAO43653 123 aa6.89□□□□□ -1.31
GPNMB-206ENST00000465673 ZNF253O75346 499 aa6.89□□□□□ -1.31
GPNMB-206ENST00000465673 NDUFB6O95139 128 aa6.89□□□□□ -1.31
GPNMB-206ENST00000465673 BCAP31P51572 246 aa6.89□□□□□ -1.31
GPNMB-206ENST00000465673 SLAQ13239 276 aa6.89□□□□□ -1.31
GPNMB-206ENST00000465673 C9orf47Q6ZRZ4 202 aa6.89□□□□□ -1.31
GPNMB-206ENST00000465673 OR1L4Q8NGR5 311 aa6.89□□□□□ -1.31
GPNMB-206ENST00000465673 Q9HAA7 133 aa6.89□□□□□ -1.31
GPNMB-206ENST00000465673 SLC39A9Q9NUM3 307 aa6.89□□□□□ -1.31
GPNMB-206ENST00000465673 WDR83OSQ9Y284 106 aa6.89□□□□□ -1.31
GPNMB-206ENST00000465673 L7N2F9 121 aa6.88□□□□□ -1.31
GPNMB-206ENST00000465673 HIST1H1EP10412 219 aaKnown RBP6.88□□□□□ -1.31
GPNMB-206ENST00000465673 VAMP2P63027 116 aa6.88□□□□□ -1.31
GPNMB-206ENST00000465673 RAB31Q13636 194 aa6.88□□□□□ -1.31
GPNMB-206ENST00000465673 WFDC2Q14508 124 aa6.88□□□□□ -1.31
GPNMB-206ENST00000465673 BAK1Q16611 211 aa6.88□□□□□ -1.31
GPNMB-206ENST00000465673 Q8N814 137 aa6.88□□□□□ -1.31
GPNMB-206ENST00000465673 ZNF492Q9P255 531 aa6.88□□□□□ -1.31
GPNMB-206ENST00000465673 LSM5Q9Y4Y9 91 aaKnown RBP6.88□□□□□ -1.31
GPNMB-206ENST00000465673 LRP1Q07954 4544 aaKnown RBP6.88□□□□□ -1.31
GPNMB-206ENST00000465673 IGHV3-16A0A0C4DH30 117 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 UBE2L5PA0A1B0GUS4 154 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 KRTAP29-1A8MX34 341 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-206ENST00000465673 CAV2P51636 162 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 BAXQ07812 192 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 TMEM78Q5T7P6 136 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 IQCF2Q8IXL9 164 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 NTN5Q8WTR8 489 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-206ENST00000465673 PCNPQ8WW12 178 aaKnown RBP6.87□□□□□ -1.31
GPNMB-206ENST00000465673 PFDN5Q99471 154 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 BCL7BQ9BQE9 202 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 SLC25A2Q9BXI2 301 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 SRRQ9GZT4 340 aa6.87□□□□□ -1.31
GPNMB-206ENST00000465673 C11orf1Q9H5F2 150 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms