RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 CDC42EP2O14613 210 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 APODP05090 189 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 MIFP14174 115 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 CKS2P33552 79 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 ROMO1P60602 79 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 ELOBQ15370 118 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 IDO2Q6ZQW0 420 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 ATOH7Q8N100 152 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 C10orf111Q8N326 155 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 TCTEX1D1Q8N7M0 179 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 CCL4L1Q8NHW4 92 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 NAA38Q9BRA0 125 aaKnown RBP2.05□□□□□ -2.08
USP25-207ENST00000464435 TIMM21Q9BVV7 248 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 SLC35B3Q9H1N7 401 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 SAR1AQ9NR31 198 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 METTL1Q9UBP6 276 aaKnown RBP2.05□□□□□ -2.08
USP25-207ENST00000464435 TMEM2Q9UHN6 1383 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 PTPRBP23467 1997 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 ICE1Q9Y2F5 2266 aa2.05□□□□□ -2.08
USP25-207ENST00000464435 CACNA1GO43497 2377 aa2.04□□□□□ -2.08
USP25-207ENST00000464435 ZNF737O75373 536 aa2.04□□□□□ -2.08
USP25-207ENST00000464435 IGLV1-51P01701 117 aa2.04□□□□□ -2.08
USP25-207ENST00000464435 OCIAD2Q56VL3 154 aa2.04□□□□□ -2.08
USP25-207ENST00000464435 C1orf134Q5TEV5 83 aa2.04□□□□□ -2.08
USP25-207ENST00000464435 C2orf82Q6UX34 121 aa2.04□□□□□ -2.08
USP25-207ENST00000464435 RPS19BP1Q86WX3 136 aaKnown RBP2.04□□□□□ -2.08
USP25-207ENST00000464435 LINC00311Q8N616 119 aa2.04□□□□□ -2.08
USP25-207ENST00000464435 MRC2Q9UBG0 1479 aa2.04□□□□□ -2.08
USP25-207ENST00000464435 DNAJC15Q9Y5T4 150 aa2.04□□□□□ -2.08
USP25-207ENST00000464435 LHFPL6Q9Y693 200 aa2.04□□□□□ -2.08
USP25-207ENST00000464435 MPDZO75970 2070 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 FGD6Q6ZV73 1430 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 CCNB3Q8WWL7 1395 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 C3orf85A0A1B0GTC6 90 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 ZNF705FA8MVS1 300 aaPredicted RBP2.03□□□□□ -2.08
USP25-207ENST00000464435 B4DSR2 109 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 SNAPC5O75971 98 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 ERC2-IT1O76042 136 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 CD3DP04234 171 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 SMIM6P0DI80 62 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 PYYP10082 97 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 ZNF93P35789 620 aaPredicted RBP2.03□□□□□ -2.08
USP25-207ENST00000464435 DSCR4P56555 118 aaPredicted RBP2.03□□□□□ -2.08
USP25-207ENST00000464435 ARPINQ7Z6K5 226 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 OR5AS1Q8N127 324 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 KCNRGQ8N5I3 272 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.03□□□□□ -2.08
USP25-207ENST00000464435 OTOSQ8NHW6 89 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 CIB3Q96Q77 187 aaPredicted RBP2.03□□□□□ -2.08
USP25-207ENST00000464435 NABP2Q9BQ15 211 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 PSMG3Q9BT73 122 aaPredicted RBP2.03□□□□□ -2.08
USP25-207ENST00000464435 CCDC88CQ9P219 2028 aa2.03□□□□□ -2.08
USP25-207ENST00000464435 FOCADQ5VW36 1801 aa2.03□□□□□ -2.09
USP25-207ENST00000464435 SMARCA4P51532 1647 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 GLI3P10071 1580 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 ARHGAP31Q2M1Z3 1444 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 ZFC3H1O60293 1989 aaKnown RBP2.02□□□□□ -2.09
USP25-207ENST00000464435 MYLKQ15746 1914 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 TRBV20-1A0A075B6N2 111 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 TRAV10A0A0B4J240 114 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 TRAV12-1A0A0B4J245 112 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 IGHV1-24A0A0C4DH33 117 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 LOC107984156A0A0G2JMH3 177 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 A0A0G2JQZ4 141 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 TCRBV4S1A1TA0A5B7 111 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 C20orf202A1L168 122 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 E7EUB6 86 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 C5orf67F2Z3F1 127 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 CD14P08571 375 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 AKAIN1P0CW23 69 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 CCL4P13236 92 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 FGF7P21781 194 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 DEFB113Q30KQ7 82 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 SCIMPQ6UWF3 145 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 ARL17AQ8IVW1 177 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 CLECL1Q8IZS7 167 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 SFT2D1Q8WV19 159 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 RERGLQ9H628 205 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 LSM2Q9Y333 95 aaKnown RBP2.02□□□□□ -2.09
USP25-207ENST00000464435 POLEQ07864 2286 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 SCRIBQ14160 1630 aa2.02□□□□□ -2.09
USP25-207ENST00000464435 RTEL1-TNFRSF6BF6WH68 1400 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 STRCQ7RTU9 1775 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 TRAV14DV4A0A0A6YYC5 116 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 ZNF736B4DX44 427 aaPredicted RBP2.01□□□□□ -2.09
USP25-207ENST00000464435 CORTO00230 105 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 EDF1O60869 148 aaKnown RBP2.01□□□□□ -2.09
USP25-207ENST00000464435 CD2P06729 351 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 BRS3P32247 399 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 CCSMST1Q4G0I0 132 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 MEIG1Q5JSS6 88 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 CASC2Q6XLA1 102 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 GKN2Q86XP6 184 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 C9orf163Q8N9P6 203 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 ZNF431Q8TF32 576 aaPredicted RBP2.01□□□□□ -2.09
USP25-207ENST00000464435 COPS9Q8WXC6 57 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 Q96M85 177 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 SDF2Q99470 211 aa2.01□□□□□ -2.09
USP25-207ENST00000464435 SMIM7Q9BQ49 75 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms