RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 COA6Q5JTJ3 125 aaKnown RBP7.24□□□□□ -1.25
HPS4-208ENST00000464362 PLA2G2CQ5R387 149 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 RASL11AQ6T310 242 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 SYT8Q8NBV8 401 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 ZC2HC1AQ96GY0 325 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 ANAPC13Q9BS18 74 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 MTORP42345 2549 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 A0A0G2JLM5 398 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 IGKCP01834 107 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 SNRPD3P62318 126 aaKnown RBP7.24□□□□□ -1.25
HPS4-208ENST00000464362 SLC50A1Q9BRV3 221 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 POLQO75417 2590 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 IGHV3-73A0A0B4J1V6 119 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 IGLC1P0CG04 106 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 SAA4P35542 130 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 PATE2Q6UY27 113 aa7.24□□□□□ -1.25
HPS4-208ENST00000464362 FN1P02751 2386 aaKnown RBP7.24□□□□□ -1.25
HPS4-208ENST00000464362 TRBV19A0A075B6N1 114 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 SMIM27A0A1W2PRY6 76 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 ZNF48Q96MX3 618 aaPredicted RBP7.23□□□□□ -1.25
HPS4-208ENST00000464362 H3BUX3 64 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 KIR3DS1Q14943 382 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 CFAP161Q6P656 301 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 SIGLEC15Q6ZMC9 328 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 ITLN2Q8WWU7 325 aaPredicted RBP7.23□□□□□ -1.25
HPS4-208ENST00000464362 LRRK2Q5S007 2527 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 TRAV26-2A0A0B4J265 109 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 A0A1W2PRX2 142 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 IGLC7A0M8Q6 106 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 ZNF815PA8K554 130 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 NPIPB6E9PJ23 425 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 FCN3O75636 299 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 PPBPP02775 128 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 SAMD5Q5TGI4 173 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 TEX43Q6ZNM6 134 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 ZNF479Q96JC4 524 aa7.23□□□□□ -1.25
HPS4-208ENST00000464362 GEMIN7Q9H840 131 aaKnown RBP7.23□□□□□ -1.25
HPS4-208ENST00000464362 TRAV41A0A0B4J266 112 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 RUSC1-AS1Q66K80 236 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 SEM1Q6ZVN7 128 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 C22orf46C9J442 243 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 ATP6V0E1O15342 81 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 SRSF1Q07955 248 aaKnown RBP eCLIP7.22□□□□□ -1.25
HPS4-208ENST00000464362 PSMG4Q5JS54 123 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 MAPK1IP1LQ8NDC0 245 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 PRSS33Q8NF86 280 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 MS4A6AQ9H2W1 248 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 PAX2Q02962 417 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 HSD52Q0P140 79 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 VGLL1Q99990 258 aa7.22□□□□□ -1.25
HPS4-208ENST00000464362 CHTOPQ9Y3Y2 248 aaKnown RBP7.22□□□□□ -1.25
HPS4-208ENST00000464362 A0A087WWL8 130 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 TRAV12-3A0A0B4J271 114 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 TRAV21A0A0B4J279 112 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 ESDP10768 282 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 PRTN3P24158 256 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 SUMO2P61956 95 aaKnown RBP7.21□□□□□ -1.25
HPS4-208ENST00000464362 POU2AF1Q16633 256 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 C22orf34Q6ZV56 151 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 OR4X2Q8NGF9 303 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 NPFFR1Q9GZQ6 430 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 SMAD7O15105 426 aaKnown RBP7.21□□□□□ -1.25
HPS4-208ENST00000464362 SEC11AP67812 179 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 FAM120AOSQ5T036 256 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 ZNF562Q6V9R5 426 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 C1orf229Q6ZS94 237 aaPredicted RBP7.21□□□□□ -1.25
HPS4-208ENST00000464362 IL17RELQ6ZVW7 336 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 CSTL1Q9H114 145 aa7.21□□□□□ -1.25
HPS4-208ENST00000464362 MEIG1Q5JSS6 88 aa7.21□□□□□ -1.26
HPS4-208ENST00000464362 TEX36Q5VZQ5 186 aa7.21□□□□□ -1.26
HPS4-208ENST00000464362 SPRY4Q9C004 299 aa7.21□□□□□ -1.26
HPS4-208ENST00000464362 TP73-AS1Q9UF72 201 aa7.21□□□□□ -1.26
HPS4-208ENST00000464362 FAM231BA6NCW3 169 aa7.21□□□□□ -1.26
HPS4-208ENST00000464362 TNFRSF6BO95407 300 aa7.21□□□□□ -1.26
HPS4-208ENST00000464362 NPYP01303 97 aa7.21□□□□□ -1.26
HPS4-208ENST00000464362 NPC2P61916 151 aa7.21□□□□□ -1.26
HPS4-208ENST00000464362 MRPS16Q9Y3D3 137 aaKnown RBP7.21□□□□□ -1.26
HPS4-208ENST00000464362 KIR2DL5BA0A0G2JN68 375 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 KIR2DL5BA0A0G2JPC4 375 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 MRPL51Q4U2R6 128 aaKnown RBP7.2□□□□□ -1.26
HPS4-208ENST00000464362 FAM104BQ5XKR9 115 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 FAM231DQ6ZW35 169 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 NEGR1Q7Z3B1 354 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 KIR2DL5AQ8N109 375 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 MRAP2Q96G30 205 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 DUX3Q96PT4 197 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 TRAV2A0A0B4J234 112 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 OVOL3O00110 214 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 TDGF1P13385 188 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 GATA1P15976 413 aaPredicted RBP7.2□□□□□ -1.26
HPS4-208ENST00000464362 LAGE3Q14657 143 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 NUP210LQ5VU65 1888 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 SIGLEC8Q9NYZ4 499 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 TNFRSF18Q9Y5U5 241 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 CCL25O15444 150 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 LHBP01229 141 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 COX6CP09669 75 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 ZNF491Q8N8L2 437 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 FAM167A-AS1Q96KT0 104 aa7.2□□□□□ -1.26
HPS4-208ENST00000464362 PRR25Q96S07 402 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms