RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ZNF253O75346 499 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 PSMB8P28062 276 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 HBBP68871 147 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 PSG9Q00887 426 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 CLEC19AQ6UXS0 136 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 RBPMS2Q6ZRY4 209 aaKnown RBP11.16□□□□□ -0.62
COL5A1-205ENST00000464187 ZNF664Q8N3J9 261 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
COL5A1-205ENST00000464187 FAM231BA6NCW3 169 aa11.15□□□□□ -0.62
COL5A1-205ENST00000464187 SCGB1D1O95968 90 aa11.15□□□□□ -0.62
COL5A1-205ENST00000464187 RNASE1P07998 156 aaKnown RBP11.15□□□□□ -0.62
COL5A1-205ENST00000464187 Q6ZSV7 163 aa11.15□□□□□ -0.62
COL5A1-205ENST00000464187 OR2D3Q8NGH3 330 aa11.15□□□□□ -0.62
COL5A1-205ENST00000464187 C18orf32Q8TCD1 76 aa11.15□□□□□ -0.62
COL5A1-205ENST00000464187 SAMD10Q9BYL1 202 aa11.15□□□□□ -0.62
COL5A1-205ENST00000464187 NAGKQ9UJ70 344 aa11.15□□□□□ -0.62
COL5A1-205ENST00000464187 A0A1W2PS18 150 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 CYSRT1A8MQ03 144 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 CD33P20138 364 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 C8orf49Q96NF6 230 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 IGKV2-40A0A087WW87 121 aaPredicted RBP11.14□□□□□ -0.63
COL5A1-205ENST00000464187 A0A0G2JLM5 398 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 SERTM2A0A1B0GWG4 89 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 IGKV2D-40P01614 121 aaPredicted RBP11.14□□□□□ -0.63
COL5A1-205ENST00000464187 GPX1P07203 203 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 DDTP30046 118 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 CSN1S1P47710 185 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 CRIP1P50238 77 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 PRR31Q5SQ13 230 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 RNF114Q9Y508 228 aa11.14□□□□□ -0.63
COL5A1-205ENST00000464187 TMEM89A2RUT3 159 aa11.13□□□□□ -0.63
COL5A1-205ENST00000464187 CLPSL1A2RUU4 121 aa11.13□□□□□ -0.63
COL5A1-205ENST00000464187 IGHV3-11P01762 117 aa11.13□□□□□ -0.63
COL5A1-205ENST00000464187 KLF5Q13887 457 aaPredicted RBP11.13□□□□□ -0.63
COL5A1-205ENST00000464187 ATP6V0BQ99437 205 aa11.13□□□□□ -0.63
COL5A1-205ENST00000464187 ALKBH7Q9BT30 221 aaPredicted RBP11.13□□□□□ -0.63
COL5A1-205ENST00000464187 CHEK1O14757 476 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 APOHP02749 345 aaPredicted RBP11.12□□□□□ -0.63
COL5A1-205ENST00000464187 S100A7P31151 101 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 FAM209BQ5JX69 171 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 ARL6IP6Q8N6S5 226 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 JMJD8Q96S16 334 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 NSD1Q96L73 2696 aaPredicted RBP11.12□□□□□ -0.63
COL5A1-205ENST00000464187 NF1P21359 2839 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 ZNF324O75467 553 aaPredicted RBP11.12□□□□□ -0.63
COL5A1-205ENST00000464187 ELANEP08246 267 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 PMCHP20382 165 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 HLA-DMBP28068 263 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 AMTP48728 403 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
COL5A1-205ENST00000464187 FOXE3Q13461 319 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 IGFL4Q6B9Z1 124 aa11.12□□□□□ -0.63
COL5A1-205ENST00000464187 FN1P02751 2386 aaKnown RBP11.11□□□□□ -0.63
COL5A1-205ENST00000464187 F8P00451 2351 aa11.11□□□□□ -0.63
COL5A1-205ENST00000464187 A0A087X0K7 114 aa11.11□□□□□ -0.63
COL5A1-205ENST00000464187 A8MWP6 167 aa11.11□□□□□ -0.63
COL5A1-205ENST00000464187 BUB3O43684 328 aa11.11□□□□□ -0.63
COL5A1-205ENST00000464187 TRBV12-3P01733 135 aa11.11□□□□□ -0.63
COL5A1-205ENST00000464187 RPLP1P05386 114 aaKnown RBP11.11□□□□□ -0.63
COL5A1-205ENST00000464187 DEFA6Q01524 100 aa11.11□□□□□ -0.63
COL5A1-205ENST00000464187 OR4X2Q8NGF9 303 aa11.11□□□□□ -0.63
COL5A1-205ENST00000464187 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.1□□□□□ -0.63
COL5A1-205ENST00000464187 ZNF705FA8MVS1 300 aaPredicted RBP11.1□□□□□ -0.63
COL5A1-205ENST00000464187 HAX1O00165 279 aa11.1□□□□□ -0.63
COL5A1-205ENST00000464187 CRLF1O75462 422 aa11.1□□□□□ -0.63
COL5A1-205ENST00000464187 ZNF705DP0CH99 300 aaPredicted RBP11.1□□□□□ -0.63
COL5A1-205ENST00000464187 ZNF705BP0CI00 300 aaPredicted RBP11.1□□□□□ -0.63
COL5A1-205ENST00000464187 ARL3P36405 182 aa11.1□□□□□ -0.63
COL5A1-205ENST00000464187 KLHDC1Q8N7A1 406 aa11.1□□□□□ -0.63
COL5A1-205ENST00000464187 NRN1Q9NPD7 142 aa11.1□□□□□ -0.63
COL5A1-205ENST00000464187 CT45A10P0DMU9 189 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
COL5A1-205ENST00000464187 COX8CQ7Z4L0 72 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 NIT1Q86X76 327 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 C14orf144Q96I85 54 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 IGHV3-66A0A0C4DH42 116 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 SH2D1AO60880 128 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 ARMS2P0C7Q2 107 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 REC114Q7Z4M0 266 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 FAM19A2Q8N3H0 131 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 RNF152Q8N8N0 203 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 MYOZ3Q8TDC0 251 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 VGLL1Q99990 258 aa11.09□□□□□ -0.63
COL5A1-205ENST00000464187 KIR2DL5BA0A0G2JN68 375 aa11.08□□□□□ -0.64
COL5A1-205ENST00000464187 KIR2DL5BA0A0G2JPC4 375 aa11.08□□□□□ -0.64
COL5A1-205ENST00000464187 A0A1B0GUT8 65 aa11.08□□□□□ -0.64
COL5A1-205ENST00000464187 FBLL1A6NHQ2 334 aaKnown RBP11.08□□□□□ -0.64
COL5A1-205ENST00000464187 TCF21O43680 179 aa11.08□□□□□ -0.64
COL5A1-205ENST00000464187 TEX43Q6ZNM6 134 aa11.08□□□□□ -0.64
COL5A1-205ENST00000464187 KIR2DL5AQ8N109 375 aa11.08□□□□□ -0.64
COL5A1-205ENST00000464187 Q8N976 141 aa11.08□□□□□ -0.64
COL5A1-205ENST00000464187 Q8TAT8 98 aa11.08□□□□□ -0.64
COL5A1-205ENST00000464187 PRR25Q96S07 402 aa11.08□□□□□ -0.64
COL5A1-205ENST00000464187 IGHV3OR16-13A0A075B7E8 117 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 IGHV3-74A0A0B4J1X5 117 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 ZNF207O43670 478 aaKnown RBP11.07□□□□□ -0.64
COL5A1-205ENST00000464187 KRTDAPP60985 99 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 C1orf194Q5T5A4 169 aa11.07□□□□□ -0.64
COL5A1-205ENST00000464187 LCN12Q6JVE5 192 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms