RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 KIAA2026Q5HYC2 2103 aa2.15□□□□□ -2.06
ITGB1-208ENST00000464001 SCAF11Q99590 1463 aaKnown RBP2.15□□□□□ -2.06
ITGB1-208ENST00000464001 ABCA3Q99758 1704 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 IGKV2D-26A0A0A0MRZ7 120 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 A0A0J9YX75 114 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 COLCA2A8K830 154 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 TMEM258P61165 79 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 PCBD1P61457 104 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 BLCAPP62952 87 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 CDK6Q00534 326 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 LY6EQ16553 131 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 ESRGQ1W209 222 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 Q6ZUT4 128 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 ACBD7Q8N6N7 88 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 Q8N814 137 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 SNRNP25Q9BV90 132 aaKnown RBP2.15□□□□□ -2.07
ITGB1-208ENST00000464001 MPC1Q9Y5U8 109 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 HSPE1-MOB4S4R3N1 261 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 NUMA1Q14980 2115 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 ROBO1Q9Y6N7 1651 aa2.15□□□□□ -2.07
ITGB1-208ENST00000464001 KIAA1549LQ6ZVL6 1849 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 CC2D2AQ9P2K1 1620 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 TRBV20-1A0A075B6N2 111 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 PVALEFA0A1B0GWK0 134 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 CPSF4O95639 269 aaKnown RBP2.14□□□□□ -2.07
ITGB1-208ENST00000464001 IGLV3-19P01714 112 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 MGST1P10620 155 aaKnown RBP2.14□□□□□ -2.07
ITGB1-208ENST00000464001 CCL4P13236 92 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 HIST1H1DP16402 221 aaKnown RBP2.14□□□□□ -2.07
ITGB1-208ENST00000464001 PEBP1P30086 187 aaKnown RBP2.14□□□□□ -2.07
ITGB1-208ENST00000464001 TPPP2P59282 170 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 BTG2P78543 158 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 MRPS36P82909 103 aaKnown RBP2.14□□□□□ -2.07
ITGB1-208ENST00000464001 HSD52Q0P140 79 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 CATR1Q13166 79 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 PABPC1L2AQ5JQF8 200 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 SPINT4Q6UDR6 99 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 GTF2H5Q6ZYL4 71 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 Q8N2B8 174 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 LINC00471Q8N535 108 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 KCNRGQ8N5I3 272 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 NABP2Q9BQ15 211 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 METTL1Q9UBP6 276 aaKnown RBP2.14□□□□□ -2.07
ITGB1-208ENST00000464001 RPL26L1Q9UNX3 145 aaKnown RBP2.14□□□□□ -2.07
ITGB1-208ENST00000464001 R4GN34 69 aa2.14□□□□□ -2.07
ITGB1-208ENST00000464001 MYO9BQ13459 2157 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 MUC4Q99102 2169 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 CASZ1Q86V15 1759 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 TRAV12-2A0A075B6T6 113 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 TRAV1-1A0A0B4J248 108 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 LOC107986453A0A1B0GWG9 222 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 OR51F1A6NGY5 319 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 A6NN06 94 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 ROMO1P60602 79 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 CIRBPQ14011 172 aaKnown RBP2.13□□□□□ -2.07
ITGB1-208ENST00000464001 C1orf134Q5TEV5 83 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 MIC13Q5XKP0 118 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 GKN2Q86XP6 184 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 OR5AS1Q8N127 324 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 C10orf111Q8N326 155 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 OTOSQ8NHW6 89 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 C20orf166-AS1Q96NR2 134 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 LINC00467Q9BRT7 94 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 SNHG12Q9BXW3 62 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 SEC11CQ9BY50 192 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 TPRKBQ9Y3C4 175 aa2.13□□□□□ -2.07
ITGB1-208ENST00000464001 ZSWIM8A7E2V4 1837 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 DIDO1Q9BTC0 2240 aaKnown RBP2.12□□□□□ -2.07
ITGB1-208ENST00000464001 M0R233 179 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 KLF7O75840 302 aaPredicted RBP2.12□□□□□ -2.07
ITGB1-208ENST00000464001 TRACP01848 142 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 SAA1P0DJI8 122 aaPredicted RBP2.12□□□□□ -2.07
ITGB1-208ENST00000464001 S100A10P60903 97 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 LSM3P62310 102 aaKnown RBP2.12□□□□□ -2.07
ITGB1-208ENST00000464001 MOBPQ13875 183 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 ATOH7Q8N100 152 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 LINC00301Q8NCQ3 95 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 OR5AK2Q8NH90 309 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 SFT2D1Q8WV19 159 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 HYLS1Q96M11 299 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 AGPAT4-IT1Q9H0P7 198 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 RERGLQ9H628 205 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 NHP2Q9NX24 153 aaKnown RBP2.12□□□□□ -2.07
ITGB1-208ENST00000464001 TAS2R4Q9NYW5 299 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 CFTRP13569 1480 aa2.12□□□□□ -2.07
ITGB1-208ENST00000464001 SPHKAPQ2M3C7 1700 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 GLI3P10071 1580 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 PTPRFP10586 1907 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 MYH8P13535 1937 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 CEP192Q8TEP8 1941 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 LAMB2P55268 1798 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 hDV103S1A0JD37 113 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 LYRM1O43325 122 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 MPC2O95563 127 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 CRPP02741 224 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 RBP4P02753 201 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 CKS2P33552 79 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 ZNF90Q03938 601 aa2.11□□□□□ -2.07
ITGB1-208ENST00000464001 MRPL54Q6P161 138 aaKnown RBP2.11□□□□□ -2.07
ITGB1-208ENST00000464001 LSM10Q969L4 123 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms