RNA–Protein interactions for RNA: ENST00000463603.5

ABCA2-209, Transcript of ATP binding cassette subfamily A member 2, human

TSL 3

Gene ABCA2, Length 655 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-209	ENST00000463603	TMEM78	Q5T7P6	136 aa		10.84	□□□□□ -0.67
ABCA2-209	ENST00000463603	GFI1B	Q5VTD9	330 aa		10.84	□□□□□ -0.67
ABCA2-209	ENST00000463603		Q6ZTC4	211 aa		10.84	□□□□□ -0.67
ABCA2-209	ENST00000463603	RXFP4	Q8TDU9	374 aa		10.84	□□□□□ -0.67
ABCA2-209	ENST00000463603	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.84	□□□□□ -0.67
ABCA2-209	ENST00000463603	OTOR	Q9NRC9	128 aa		10.84	□□□□□ -0.67
ABCA2-209	ENST00000463603	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.84	□□□□□ -0.67
ABCA2-209	ENST00000463603	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	PGP	A6NDG6	321 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603		J3KRW8	73 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	IGKV2D-40	P01614	121 aa	Predicted RBP	10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	SLC25A5	P05141	298 aa	Known RBP	10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	ARL14EPL	P0DKL9	152 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	HTN1	P15515	57 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	FAM222A	Q5U5X8	452 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	ZNF767P	Q75MW2	155 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	KCNRG	Q8N5I3	272 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	OR11H4	Q8NGC9	324 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	VGLL1	Q99990	258 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	ARPC5L	Q9BPX5	153 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	CYTL1	Q9NRR1	136 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603	ZNF492	Q9P255	531 aa		10.83	□□□□□ -0.68
ABCA2-209	ENST00000463603		A0A0D9SG52	128 aa		10.82	□□□□□ -0.68
ABCA2-209	ENST00000463603	RBAKDN	A6NC62	111 aa		10.82	□□□□□ -0.68
ABCA2-209	ENST00000463603	NMB	P08949	121 aa		10.82	□□□□□ -0.68
ABCA2-209	ENST00000463603	ARL6IP6	Q8N6S5	226 aa		10.82	□□□□□ -0.68
ABCA2-209	ENST00000463603	CMTM2	Q8TAZ6	248 aa		10.82	□□□□□ -0.68
ABCA2-209	ENST00000463603	C16orf74	Q96GX8	76 aa		10.82	□□□□□ -0.68
ABCA2-209	ENST00000463603	FAM19A4	Q96LR4	140 aa		10.82	□□□□□ -0.68
ABCA2-209	ENST00000463603	NIPSNAP3B	Q9BS92	247 aa		10.82	□□□□□ -0.68
ABCA2-209	ENST00000463603	DEFB131B	A0A096LNP1	70 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	TRAV12-3	A0A0B4J271	114 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	KLLN	B2CW77	178 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	DIRC3	C9JPN6	131 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	CXorf1	O96002	111 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	GPX1	P07203	203 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	CRISP2	P16562	243 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	AZU1	P20160	251 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	GCHFR	P30047	84 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	TCTA	P57738	103 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	AKR1C8P	Q5T2L2	129 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	ZNF493	Q6ZR52	646 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	HYLS1	Q96M11	299 aa		10.81	□□□□□ -0.68
ABCA2-209	ENST00000463603	TRBV7-9	A0A0J9YWB2	115 aa		10.8	□□□□□ -0.68
ABCA2-209	ENST00000463603	C7orf71	A4D174	169 aa		10.8	□□□□□ -0.68
ABCA2-209	ENST00000463603	LYRM9	A8MSI8	78 aa		10.8	□□□□□ -0.68
ABCA2-209	ENST00000463603	IGLL5	B9A064	214 aa		10.8	□□□□□ -0.68
ABCA2-209	ENST00000463603	ZNF138	P52744	262 aa		10.8	□□□□□ -0.68
ABCA2-209	ENST00000463603	CCDC28A	Q8IWP9	274 aa		10.8	□□□□□ -0.68
ABCA2-209	ENST00000463603	SUN5	Q8TC36	379 aa		10.8	□□□□□ -0.68
ABCA2-209	ENST00000463603	TMEM167B	Q9NRX6	74 aa		10.8	□□□□□ -0.68
ABCA2-209	ENST00000463603	CTXND1	A0A1B0GTU2	59 aa		10.79	□□□□□ -0.68
ABCA2-209	ENST00000463603		A0A1B0GVG6	124 aa		10.79	□□□□□ -0.68
ABCA2-209	ENST00000463603	KANTR	A0A1W2PQU2	76 aa		10.79	□□□□□ -0.68
ABCA2-209	ENST00000463603	RNASE4	P34096	147 aa	Known RBP	10.79	□□□□□ -0.68
ABCA2-209	ENST00000463603	DAD1	P61803	113 aa		10.79	□□□□□ -0.68
ABCA2-209	ENST00000463603	CD300C	Q08708	224 aa		10.79	□□□□□ -0.68
ABCA2-209	ENST00000463603	TMEM263	Q8WUH6	116 aa	Known RBP	10.79	□□□□□ -0.68
ABCA2-209	ENST00000463603	PYGO2	Q9BRQ0	406 aa		10.79	□□□□□ -0.68
ABCA2-209	ENST00000463603	PLA2G2E	Q9NZK7	142 aa		10.79	□□□□□ -0.68
ABCA2-209	ENST00000463603	DNAH1	Q9P2D7	4330 aa		10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	PLAC8L1	A1L4L8	177 aa		10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	ZNF324	O75467	553 aa	Predicted RBP	10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	SSX7	Q7RTT5	188 aa		10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	ZFAND2A	Q8N6M9	145 aa		10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	RNASE8	Q8TDE3	154 aa	Known RBP	10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	TMED6	Q8WW62	240 aa		10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	LINC00476	Q8WZB0	136 aa		10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	ST6GAL2	Q96JF0	529 aa		10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	RPH3AL	Q9UNE2	315 aa		10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	LENEP	Q9Y5L5	61 aa		10.78	□□□□□ -0.68
ABCA2-209	ENST00000463603	BCL2L11	O43521	198 aa		10.77	□□□□□ -0.69
ABCA2-209	ENST00000463603	LY6G6C	O95867	125 aa		10.77	□□□□□ -0.69
ABCA2-209	ENST00000463603	EIF5A	P63241	154 aa	Known RBP	10.77	□□□□□ -0.69
ABCA2-209	ENST00000463603	BTN1A1	Q13410	526 aa		10.77	□□□□□ -0.69
ABCA2-209	ENST00000463603	ZNF726P1	Q15940	193 aa		10.77	□□□□□ -0.69
ABCA2-209	ENST00000463603	IQCF2	Q8IXL9	164 aa		10.77	□□□□□ -0.69
ABCA2-209	ENST00000463603		Q8TAT8	98 aa		10.77	□□□□□ -0.69
ABCA2-209	ENST00000463603	ZNF471	Q9BX82	626 aa	Predicted RBP	10.77	□□□□□ -0.69
ABCA2-209	ENST00000463603	ALMS1	Q8TCU4	4167 aa		10.76	□□□□□ -0.69
ABCA2-209	ENST00000463603	IGHV4-4	A0A075B6R2	117 aa		10.76	□□□□□ -0.69
ABCA2-209	ENST00000463603	PFDN1	O60925	122 aa		10.76	□□□□□ -0.69
ABCA2-209	ENST00000463603	SEC11B	P0C7V7	166 aa		10.76	□□□□□ -0.69
ABCA2-209	ENST00000463603	GOLT1A	Q6ZVE7	132 aa		10.76	□□□□□ -0.69
ABCA2-209	ENST00000463603	TMUB2	Q71RG4	321 aa		10.76	□□□□□ -0.69
ABCA2-209	ENST00000463603	TCTE3	Q8IZS6	198 aa		10.76	□□□□□ -0.69
ABCA2-209	ENST00000463603	C5orf17	Q8NAS9	161 aa		10.76	□□□□□ -0.69
ABCA2-209	ENST00000463603	LINC00467	Q9BRT7	94 aa		10.76	□□□□□ -0.69
ABCA2-209	ENST00000463603	APLN	Q9ULZ1	77 aa		10.76	□□□□□ -0.69
ABCA2-209	ENST00000463603	SERTM2	A0A1B0GWG4	89 aa		10.75	□□□□□ -0.69
ABCA2-209	ENST00000463603		A0A1W2PRE2	83 aa		10.75	□□□□□ -0.69
ABCA2-209	ENST00000463603	SNURFL	B1AK76	121 aa		10.75	□□□□□ -0.69
ABCA2-209	ENST00000463603	DEFB130B	P0DP73	79 aa		10.75	□□□□□ -0.69
ABCA2-209	ENST00000463603	DEFB130A	P0DP74	79 aa		10.75	□□□□□ -0.69
ABCA2-209	ENST00000463603	SUMO1	P63165	101 aa	Known RBP	10.75	□□□□□ -0.69
ABCA2-209	ENST00000463603	LGALS9C	Q6DKI2	356 aa		10.75	□□□□□ -0.69
ABCA2-209	ENST00000463603	EIF4E3	Q8N5X7	224 aa	Known RBP	10.75	□□□□□ -0.69
ABCA2-209	ENST00000463603	NOP10	Q9NPE3	64 aa	Known RBP	10.75	□□□□□ -0.69
ABCA2-209	ENST00000463603	UMAD1	C9J7I0	102 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms