RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 FAM74A1Q5RGS3 127 aa9.37□□□□□ -0.91
R3HDM1-213ENST00000463230 FAM122CQ6P4D5 195 aa9.37□□□□□ -0.91
R3HDM1-213ENST00000463230 ZNF493Q6ZR52 646 aa9.37□□□□□ -0.91
R3HDM1-213ENST00000463230 HMSDA8MTL9 139 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 SVIPQ8NHG7 77 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 FAM19A4Q96LR4 140 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 Q9H3A6 140 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 DKK2Q9UBU2 259 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 TRAV12-2A0A075B6T6 113 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 LYRM9A8MSI8 78 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 STAG3L2P0CL84 134 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 STAG3L3P0CL85 134 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 CRISP2P16562 243 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 C12orf74Q32Q52 190 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 TMEM78Q5T7P6 136 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 RPL7L1Q6DKI1 246 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 C16orf74Q96GX8 76 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 LINC01587Q99440 93 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 CELA1Q9UNI1 258 aa9.36□□□□□ -0.91
R3HDM1-213ENST00000463230 ARPC5O15511 151 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 SUN5Q8TC36 379 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 LINC00467Q9BRT7 94 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 AGPAT4-IT1Q9H0P7 198 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 LENEPQ9Y5L5 61 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 KLLNB2CW77 178 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 RGS13O14921 159 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 RANP62826 216 aaKnown RBP9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 IFITM2Q01629 132 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 ZFP69Q49AA0 526 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 GFI1BQ5VTD9 330 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 Q6ZTC4 211 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 KCNRGQ8N5I3 272 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 TMED6Q8WW62 240 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 FAM210BQ96KR6 192 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 NIPSNAP3BQ9BS92 247 aa9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 YTHDF2Q9Y5A9 579 aaKnown RBP9.35□□□□□ -0.91
R3HDM1-213ENST00000463230 A0A0D9SG52 128 aa9.34□□□□□ -0.91
R3HDM1-213ENST00000463230 ZNF705GA8MUZ8 300 aaPredicted RBP9.34□□□□□ -0.91
R3HDM1-213ENST00000463230 FAM222AQ5U5X8 452 aa9.34□□□□□ -0.91
R3HDM1-213ENST00000463230 TMEM263Q8WUH6 116 aaKnown RBP9.34□□□□□ -0.91
R3HDM1-213ENST00000463230 RAB24Q969Q5 203 aa9.34□□□□□ -0.91
R3HDM1-213ENST00000463230 PYGO2Q9BRQ0 406 aa9.34□□□□□ -0.91
R3HDM1-213ENST00000463230 CSMD3Q7Z407 3707 aa9.34□□□□□ -0.91
R3HDM1-213ENST00000463230 TENM2Q9NT68 2774 aa9.34□□□□□ -0.91
R3HDM1-213ENST00000463230 STARD9Q9P2P6 4700 aa9.34□□□□□ -0.91
R3HDM1-213ENST00000463230 C7orf71A4D174 169 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 CXorf1O96002 111 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 ZNF138P52744 262 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 LINC00476Q8WZB0 136 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 SH3BGRL3Q9H299 93 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 TMEM167BQ9NRX6 74 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 ZNF492Q9P255 531 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 IGKV2-40A0A087WW87 121 aaPredicted RBP9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 IGKV2D-40P01614 121 aaPredicted RBP9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 ARL14EPLP0DKL9 152 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 EMP1P54849 157 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 ERCC8Q13216 396 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 CCDC28AQ8IWP9 274 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 CMTM2Q8TAZ6 248 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 ALMS1Q8TCU4 4167 aa9.33□□□□□ -0.92
R3HDM1-213ENST00000463230 DEFB131BA0A096LNP1 70 aa9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 DIRC3C9JPN6 131 aa9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 SMLR1H3BR10 107 aa9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 GCHFRP30047 84 aa9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 AKR1C8PQ5T2L2 129 aa9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 CYTL1Q9NRR1 136 aa9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 KMT2CQ8NEZ4 4911 aaKnown RBP9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 CTXND1A0A1B0GTU2 59 aa9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 EIF5AP63241 154 aaKnown RBP9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 SLC7A5P1Q8MH63 180 aa9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 RNASE8Q8TDE3 154 aaKnown RBP9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 VGLL1Q99990 258 aa9.32□□□□□ -0.92
R3HDM1-213ENST00000463230 PLAC8L1A1L4L8 177 aa9.31□□□□□ -0.92
R3HDM1-213ENST00000463230 PGPA6NDG6 321 aa9.31□□□□□ -0.92
R3HDM1-213ENST00000463230 DAD1P61803 113 aa9.31□□□□□ -0.92
R3HDM1-213ENST00000463230 LGALS9CQ6DKI2 356 aa9.31□□□□□ -0.92
R3HDM1-213ENST00000463230 TIMM8BQ9Y5J9 83 aaPredicted RBP9.31□□□□□ -0.92
R3HDM1-213ENST00000463230 GPX1P07203 203 aa9.31□□□□□ -0.92
R3HDM1-213ENST00000463230 ZFAND2AQ8N6M9 145 aa9.31□□□□□ -0.92
R3HDM1-213ENST00000463230 ZNF680Q8NEM1 530 aa9.31□□□□□ -0.92
R3HDM1-213ENST00000463230 APLNQ9ULZ1 77 aa9.31□□□□□ -0.92
R3HDM1-213ENST00000463230 TRAV12-3A0A0B4J271 114 aa9.3□□□□□ -0.92
R3HDM1-213ENST00000463230 FBLL1A6NHQ2 334 aaKnown RBP9.3□□□□□ -0.92
R3HDM1-213ENST00000463230 BCL2L11O43521 198 aa9.3□□□□□ -0.92
R3HDM1-213ENST00000463230 PRB4P10163 310 aaPredicted RBP9.3□□□□□ -0.92
R3HDM1-213ENST00000463230 AZU1P20160 251 aa9.3□□□□□ -0.92
R3HDM1-213ENST00000463230 KIR3DS1Q14943 382 aa9.3□□□□□ -0.92
R3HDM1-213ENST00000463230 ANXA2RQ3ZCQ2 193 aa9.3□□□□□ -0.92
R3HDM1-213ENST00000463230 C5orf17Q8NAS9 161 aa9.3□□□□□ -0.92
R3HDM1-213ENST00000463230 FAM210AQ96ND0 272 aa9.3□□□□□ -0.92
R3HDM1-213ENST00000463230 KANTRA0A1W2PQU2 76 aa9.29□□□□□ -0.92
R3HDM1-213ENST00000463230 IGLL5B9A064 214 aa9.29□□□□□ -0.92
R3HDM1-213ENST00000463230 ZNF324O75467 553 aaPredicted RBP9.29□□□□□ -0.92
R3HDM1-213ENST00000463230 TCTE3Q8IZS6 198 aa9.29□□□□□ -0.92
R3HDM1-213ENST00000463230 OR11H4Q8NGC9 324 aa9.29□□□□□ -0.92
R3HDM1-213ENST00000463230 IGHV4-4A0A075B6R2 117 aa9.29□□□□□ -0.92
R3HDM1-213ENST00000463230 A0A1W2PRE2 83 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms