RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 RANP62826 216 aaKnown RBP12.73□□□□□ -0.37
LINC00960-201ENST00000463183 AKAP14Q86UN6 197 aa12.73□□□□□ -0.37
LINC00960-201ENST00000463183 TMEM263Q8WUH6 116 aaKnown RBP12.73□□□□□ -0.37
LINC00960-201ENST00000463183 VGLL1Q99990 258 aa12.73□□□□□ -0.37
LINC00960-201ENST00000463183 C20orf144Q9BQM9 153 aa12.73□□□□□ -0.37
LINC00960-201ENST00000463183 AGPAT4-IT1Q9H0P7 198 aa12.73□□□□□ -0.37
LINC00960-201ENST00000463183 TIMM8BQ9Y5J9 83 aaPredicted RBP12.73□□□□□ -0.37
LINC00960-201ENST00000463183 SMLR1H3BR10 107 aa12.72□□□□□ -0.37
LINC00960-201ENST00000463183 P0DMU3 169 aa12.72□□□□□ -0.37
LINC00960-201ENST00000463183 FAM231AP0DMU4 169 aa12.72□□□□□ -0.37
LINC00960-201ENST00000463183 FAM231CP0DMU5 169 aa12.72□□□□□ -0.37
LINC00960-201ENST00000463183 RNASE4P34096 147 aaKnown RBP12.72□□□□□ -0.37
LINC00960-201ENST00000463183 BTN1A1Q13410 526 aa12.72□□□□□ -0.37
LINC00960-201ENST00000463183 KHDC3LQ587J8 217 aa12.72□□□□□ -0.37
LINC00960-201ENST00000463183 TMEM78Q5T7P6 136 aa12.72□□□□□ -0.37
LINC00960-201ENST00000463183 HSD17B11Q8NBQ5 300 aa12.72□□□□□ -0.37
LINC00960-201ENST00000463183 RNASE8Q8TDE3 154 aaKnown RBP12.72□□□□□ -0.37
LINC00960-201ENST00000463183 ZNF503Q96F45 646 aa12.72□□□□□ -0.37
LINC00960-201ENST00000463183 AQP10Q96PS8 301 aa12.72□□□□□ -0.37
LINC00960-201ENST00000463183 ODF3Q96PU9 254 aa12.72□□□□□ -0.37
LINC00960-201ENST00000463183 A0A1W2PPV4 95 aa12.71□□□□□ -0.37
LINC00960-201ENST00000463183 C7orf71A4D174 169 aa12.71□□□□□ -0.37
LINC00960-201ENST00000463183 HMGB3O15347 200 aaKnown RBP12.71□□□□□ -0.37
LINC00960-201ENST00000463183 TAS2R45P59539 299 aa12.71□□□□□ -0.37
LINC00960-201ENST00000463183 RAB2AP61019 212 aa12.71□□□□□ -0.37
LINC00960-201ENST00000463183 CD300CQ08708 224 aa12.71□□□□□ -0.37
LINC00960-201ENST00000463183 ACOT6Q3I5F7 207 aaPredicted RBP12.71□□□□□ -0.37
LINC00960-201ENST00000463183 ZNF493Q6ZR52 646 aa12.71□□□□□ -0.37
LINC00960-201ENST00000463183 OR11H4Q8NGC9 324 aa12.71□□□□□ -0.37
LINC00960-201ENST00000463183 HYLS1Q96M11 299 aa12.71□□□□□ -0.37
LINC00960-201ENST00000463183 LINC00477Q96M19 166 aa12.71□□□□□ -0.37
LINC00960-201ENST00000463183 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.37
LINC00960-201ENST00000463183 TNFSF18Q9UNG2 199 aa12.71□□□□□ -0.37
LINC00960-201ENST00000463183 HMSDA8MTL9 139 aa12.7□□□□□ -0.38
LINC00960-201ENST00000463183 SNURFLB1AK76 121 aa12.7□□□□□ -0.38
LINC00960-201ENST00000463183 SLC25A5P05141 298 aaKnown RBP12.7□□□□□ -0.38
LINC00960-201ENST00000463183 GPX1P07203 203 aa12.7□□□□□ -0.38
LINC00960-201ENST00000463183 CSN1S1P47710 185 aa12.7□□□□□ -0.38
LINC00960-201ENST00000463183 Q8TAT8 98 aa12.7□□□□□ -0.38
LINC00960-201ENST00000463183 FAM210BQ96KR6 192 aa12.7□□□□□ -0.38
LINC00960-201ENST00000463183 Q9H3A6 140 aa12.7□□□□□ -0.38
LINC00960-201ENST00000463183 RNF222A6NCQ9 220 aa12.69□□□□□ -0.38
LINC00960-201ENST00000463183 M0R2N4 97 aa12.69□□□□□ -0.38
LINC00960-201ENST00000463183 ATP5G1P05496 136 aa12.69□□□□□ -0.38
LINC00960-201ENST00000463183 M6PRP20645 277 aa12.69□□□□□ -0.38
LINC00960-201ENST00000463183 ATP5G3P48201 142 aa12.69□□□□□ -0.38
LINC00960-201ENST00000463183 POM121L12Q8N7R1 296 aa12.69□□□□□ -0.38
LINC00960-201ENST00000463183 FXYD6-FXYD2A0A087WZ82 144 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 GAGE12BA1L429 117 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 CBY3A6NI87 242 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 GAGE7O76087 117 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 NUDT3O95989 172 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 C1QBP02746 253 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 GAGE12FP0CL80 117 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 GAGE12GP0CL81 117 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 GAGE12IP0CL82 117 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 ZNF266Q14584 549 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 C9orf47Q6ZRZ4 202 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 INO80EQ8NBZ0 244 aaPredicted RBP12.68□□□□□ -0.38
LINC00960-201ENST00000463183 OR10G4Q8NGN3 311 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 OR10G9Q8NGN4 311 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 OR10G7Q8NGN6 311 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 PYGO2Q9BRQ0 406 aa12.68□□□□□ -0.38
LINC00960-201ENST00000463183 IGLV2-18A0A075B6J9 118 aa12.67□□□□□ -0.38
LINC00960-201ENST00000463183 PRR9Q5T870 116 aa12.67□□□□□ -0.38
LINC00960-201ENST00000463183 KLLNB2CW77 178 aa12.66□□□□□ -0.38
LINC00960-201ENST00000463183 ZNF138P52744 262 aa12.66□□□□□ -0.38
LINC00960-201ENST00000463183 OR5I1Q13606 314 aa12.66□□□□□ -0.38
LINC00960-201ENST00000463183 Q6ZQT7 251 aa12.66□□□□□ -0.38
LINC00960-201ENST00000463183 FAM19A4Q96LR4 140 aa12.66□□□□□ -0.38
LINC00960-201ENST00000463183 GSN-AS1Q9NRJ2 163 aa12.66□□□□□ -0.38
LINC00960-201ENST00000463183 ZNF492Q9P255 531 aa12.66□□□□□ -0.38
LINC00960-201ENST00000463183 RGS13O14921 159 aa12.65□□□□□ -0.38
LINC00960-201ENST00000463183 ATP6V0CP27449 155 aa12.65□□□□□ -0.38
LINC00960-201ENST00000463183 ZFAND2AQ8N6M9 145 aa12.65□□□□□ -0.38
LINC00960-201ENST00000463183 CMTM2Q8TAZ6 248 aa12.65□□□□□ -0.38
LINC00960-201ENST00000463183 ATG101Q9BSB4 218 aa12.65□□□□□ -0.38
LINC00960-201ENST00000463183 PGPA6NDG6 321 aa12.64□□□□□ -0.39
LINC00960-201ENST00000463183 ARPC5O15511 151 aa12.64□□□□□ -0.39
LINC00960-201ENST00000463183 CRISP2P16562 243 aa12.64□□□□□ -0.39
LINC00960-201ENST00000463183 CDC34P49427 236 aaPredicted RBP12.64□□□□□ -0.39
LINC00960-201ENST00000463183 ZNF345Q14585 488 aa12.64□□□□□ -0.39
LINC00960-201ENST00000463183 LYPD1Q8N2G4 141 aa12.64□□□□□ -0.39
LINC00960-201ENST00000463183 EIF4E3Q8N5X7 224 aaKnown RBP12.64□□□□□ -0.39
LINC00960-201ENST00000463183 C15orf53Q8NAA6 179 aa12.64□□□□□ -0.39
LINC00960-201ENST00000463183 SH3BGRL3Q9H299 93 aa12.64□□□□□ -0.39
LINC00960-201ENST00000463183 DNAH2Q9P225 4427 aa12.64□□□□□ -0.39
LINC00960-201ENST00000463183 DIRC3C9JPN6 131 aa12.63□□□□□ -0.39
LINC00960-201ENST00000463183 ZNF324O75467 553 aaPredicted RBP12.63□□□□□ -0.39
LINC00960-201ENST00000463183 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
LINC00960-201ENST00000463183 PQLC2Q6ZP29 291 aa12.63□□□□□ -0.39
LINC00960-201ENST00000463183 Q6ZTI0 123 aa12.63□□□□□ -0.39
LINC00960-201ENST00000463183 KCNRGQ8N5I3 272 aa12.63□□□□□ -0.39
LINC00960-201ENST00000463183 RXFP4Q8TDU9 374 aa12.63□□□□□ -0.39
LINC00960-201ENST00000463183 ARPC5LQ9BPX5 153 aa12.63□□□□□ -0.39
LINC00960-201ENST00000463183 OTORQ9NRC9 128 aa12.63□□□□□ -0.39
LINC00960-201ENST00000463183 TP53TG3Q9ULZ0 132 aa12.63□□□□□ -0.39
LINC00960-201ENST00000463183 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
LINC00960-201ENST00000463183 A0A0J9YY99 117 aa12.62□□□□□ -0.39
LINC00960-201ENST00000463183 FAM74A1Q5RGS3 127 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms