RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 IQCF2Q8IXL9 164 aa11.13□□□□□ -0.63
SND1-203ENST00000463020 PXMP4Q9Y6I8 212 aa11.13□□□□□ -0.63
SND1-203ENST00000463020 TMEM250H0YL14 139 aa11.12□□□□□ -0.63
SND1-203ENST00000463020 SUB1P53999 127 aaKnown RBP eCLIP11.12□□□□□ -0.63
SND1-203ENST00000463020 BSXQ3C1V8 233 aa11.12□□□□□ -0.63
SND1-203ENST00000463020 C2orf83Q53S99 150 aa11.12□□□□□ -0.63
SND1-203ENST00000463020 HIST1H2BAQ96A08 127 aa11.12□□□□□ -0.63
SND1-203ENST00000463020 BIN3Q9NQY0 253 aa11.12□□□□□ -0.63
SND1-203ENST00000463020 ZNF727A8MUV8 499 aa11.11□□□□□ -0.63
SND1-203ENST00000463020 IGKV3-20P01619 116 aa11.11□□□□□ -0.63
SND1-203ENST00000463020 IGLC1P0CG04 106 aa11.11□□□□□ -0.63
SND1-203ENST00000463020 MAPKAPK5-AS1Q8N8E1 139 aa11.11□□□□□ -0.63
SND1-203ENST00000463020 TMEM170AQ8WVE7 144 aa11.11□□□□□ -0.63
SND1-203ENST00000463020 MGST2Q99735 147 aa11.11□□□□□ -0.63
SND1-203ENST00000463020 TXNDC17Q9BRA2 123 aa11.11□□□□□ -0.63
SND1-203ENST00000463020 DKK2Q9UBU2 259 aa11.11□□□□□ -0.63
SND1-203ENST00000463020 IGHV3OR16-12A0A075B7B8 117 aa11.1□□□□□ -0.63
SND1-203ENST00000463020 CXorf1O96002 111 aa11.1□□□□□ -0.63
SND1-203ENST00000463020 SPART-AS1P0CW21 52 aa11.1□□□□□ -0.63
SND1-203ENST00000463020 HTN3P15516 51 aa11.1□□□□□ -0.63
SND1-203ENST00000463020 GPX4P36969 197 aaPredicted RBP11.1□□□□□ -0.63
SND1-203ENST00000463020 RPL29P47914 159 aaKnown RBP11.1□□□□□ -0.63
SND1-203ENST00000463020 RHOBP62745 196 aa11.1□□□□□ -0.63
SND1-203ENST00000463020 C1orf134Q5TEV5 83 aa11.1□□□□□ -0.63
SND1-203ENST00000463020 FAM222AQ5U5X8 452 aa11.1□□□□□ -0.63
SND1-203ENST00000463020 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
SND1-203ENST00000463020 NAT8Q9UHE5 227 aa11.1□□□□□ -0.63
SND1-203ENST00000463020 F6UZH7 168 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 HMGB3O15347 200 aaKnown RBP11.09□□□□□ -0.63
SND1-203ENST00000463020 PDE6DO43924 150 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 HLA-DRB4P13762 266 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 RAB5AP20339 215 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 B2MP61769 119 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 TMEM241Q24JQ0 296 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 MIC13Q5XKP0 118 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 SLC35E1Q96K37 410 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 NEU1Q99519 415 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 SMIM7Q9BQ49 75 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 TMPRSS5Q9H3S3 457 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 HLA-DRB4X5D2U9 266 aa11.09□□□□□ -0.63
SND1-203ENST00000463020 C16orf90A8MZG2 172 aa11.08□□□□□ -0.64
SND1-203ENST00000463020 PAGE4O60829 102 aa11.08□□□□□ -0.64
SND1-203ENST00000463020 RND2P52198 227 aa11.08□□□□□ -0.64
SND1-203ENST00000463020 TMEM144Q7Z5S9 345 aa11.08□□□□□ -0.64
SND1-203ENST00000463020 SDF2L1Q9HCN8 221 aa11.08□□□□□ -0.64
SND1-203ENST00000463020 TMEM242Q9NWH2 141 aa11.08□□□□□ -0.64
SND1-203ENST00000463020 BUB3O43684 328 aa11.07□□□□□ -0.64
SND1-203ENST00000463020 CDK2AP2O75956 126 aa11.07□□□□□ -0.64
SND1-203ENST00000463020 PRM2P04554 102 aa11.07□□□□□ -0.64
SND1-203ENST00000463020 OR10J1P30954 320 aa11.07□□□□□ -0.64
SND1-203ENST00000463020 CYP2G1PQ6ZSU1 146 aa11.07□□□□□ -0.64
SND1-203ENST00000463020 C1orf158Q8N1D5 194 aa11.07□□□□□ -0.64
SND1-203ENST00000463020 RNASEH2CQ8TDP1 164 aaKnown RBP11.07□□□□□ -0.64
SND1-203ENST00000463020 ISOC2Q96AB3 205 aa11.07□□□□□ -0.64
SND1-203ENST00000463020 C1QTNF4Q9BXJ3 329 aa11.07□□□□□ -0.64
SND1-203ENST00000463020 SAV1Q9H4B6 383 aaPredicted RBP11.07□□□□□ -0.64
SND1-203ENST00000463020 NRN1Q9NPD7 142 aa11.07□□□□□ -0.64
SND1-203ENST00000463020 CORTO00230 105 aa11.06□□□□□ -0.64
SND1-203ENST00000463020 IL4P05112 153 aa11.06□□□□□ -0.64
SND1-203ENST00000463020 S100A6P06703 90 aa11.06□□□□□ -0.64
SND1-203ENST00000463020 STAG3L2P0CL84 134 aa11.06□□□□□ -0.64
SND1-203ENST00000463020 STAG3L3P0CL85 134 aa11.06□□□□□ -0.64
SND1-203ENST00000463020 ZNF674Q2M3X9 581 aa11.06□□□□□ -0.64
SND1-203ENST00000463020 SMUG1Q53HV7 270 aa11.06□□□□□ -0.64
SND1-203ENST00000463020 SIGLEC15Q6ZMC9 328 aa11.06□□□□□ -0.64
SND1-203ENST00000463020 RPUSD4Q96CM3 377 aaKnown RBP11.06□□□□□ -0.64
SND1-203ENST00000463020 SLC45A2Q9UMX9 530 aa11.06□□□□□ -0.64
SND1-203ENST00000463020 FAT1Q14517 4588 aa11.06□□□□□ -0.64
SND1-203ENST00000463020 F6UB75 175 aa11.05□□□□□ -0.64
SND1-203ENST00000463020 EIF3GO75821 320 aaKnown RBP eCLIP11.05□□□□□ -0.64
SND1-203ENST00000463020 YPEL3P61236 119 aaPredicted RBP11.05□□□□□ -0.64
SND1-203ENST00000463020 NUTF2P61970 127 aaKnown RBP11.05□□□□□ -0.64
SND1-203ENST00000463020 SNRPD3P62318 126 aaKnown RBP11.05□□□□□ -0.64
SND1-203ENST00000463020 ADIRFQ15847 76 aa11.05□□□□□ -0.64
SND1-203ENST00000463020 GCSAMLQ5JQS6 135 aa11.05□□□□□ -0.64
SND1-203ENST00000463020 CST9LP1Q5W188 147 aa11.05□□□□□ -0.64
SND1-203ENST00000463020 ETFRF1Q6IPR1 90 aa11.05□□□□□ -0.64
SND1-203ENST00000463020 YTHDF2Q9Y5A9 579 aaKnown RBP11.05□□□□□ -0.64
SND1-203ENST00000463020 SOCS3O14543 225 aa11.04□□□□□ -0.64
SND1-203ENST00000463020 ARL14EPLP0DKL9 152 aa11.04□□□□□ -0.64
SND1-203ENST00000463020 TAS2R45P59539 299 aa11.04□□□□□ -0.64
SND1-203ENST00000463020 Q8WTZ3 238 aa11.04□□□□□ -0.64
SND1-203ENST00000463020 NPIPB3Q92617 1050 aa11.04□□□□□ -0.64
SND1-203ENST00000463020 FAM210BQ96KR6 192 aa11.04□□□□□ -0.64
SND1-203ENST00000463020 UHRF2Q96PU4 802 aa11.04□□□□□ -0.64
SND1-203ENST00000463020 PARLQ9H300 379 aa11.04□□□□□ -0.64
SND1-203ENST00000463020 TRAV30A0A087WSZ9 112 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 TMEM189A5PLL7 270 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 SMIM9A6NGZ8 99 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 LINC00869P0C866 280 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 S100PP25815 95 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 GCHFRP30047 84 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 UBE2G2P60604 165 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 GAMTQ14353 236 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 ZFP82Q8N141 532 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 OR51G1Q8NGK1 321 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 YPEL4Q96NS1 127 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 TMEM167BQ9NRX6 74 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 FUT9Q9Y231 359 aa11.03□□□□□ -0.64
SND1-203ENST00000463020 ARL2-SNX15V9GYD0 113 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms