RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 CEBPGP53567 150 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 KRTAP24-1Q3LI83 254 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 FAM106AQ4KMX7 169 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 SOHLH1Q5JUK2 328 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 C10orf91Q5T1B1 145 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 BPIFA4PQ86YQ2 179 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 LINC01006Q8NI28 216 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 FXYD5Q96DB9 178 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 METTL26Q96S19 204 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 TXNDC17Q9BRA2 123 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 C20orf24Q9BUV8 137 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 SEC11CQ9BY50 192 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 YTHDF2Q9Y5A9 579 aaKnown RBP5.54□□□□□ -1.52
UBE4B-204ENST00000462658 ARL2-SNX15V9GYD0 113 aa5.54□□□□□ -1.52
UBE4B-204ENST00000462658 A0A1W2PRE2 83 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 ZNF320A2RRD8 509 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 CLPSL1A2RUU4 121 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 F6UZH7 168 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 TMEM250H0YL14 139 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 ZNF207O43670 478 aaKnown RBP5.53□□□□□ -1.52
UBE4B-204ENST00000462658 PDE6DO43924 150 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 IGKV3-20P01619 116 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 APOC3P02656 99 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 SNRPCP09234 159 aaKnown RBP5.53□□□□□ -1.52
UBE4B-204ENST00000462658 HIST1H1EP10412 219 aaKnown RBP5.53□□□□□ -1.52
UBE4B-204ENST00000462658 CRYBB3P26998 211 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 CDX1P47902 265 aaPredicted RBP5.53□□□□□ -1.52
UBE4B-204ENST00000462658 RPEL1Q2QD12 228 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 TCTEX1D4Q5JR98 221 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 UNQ9165/PRO28630Q6UXU0 137 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 GPHB5Q86YW7 130 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 OR8I2Q8N0Y5 310 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 CYB561D1Q8N8Q1 229 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 OR4F17Q8NGA8 305 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 BLNKQ8WV28 456 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 ZMAT5Q9UDW3 170 aaKnown RBP5.53□□□□□ -1.52
UBE4B-204ENST00000462658 CARHSP1Q9Y2V2 147 aaKnown RBP5.53□□□□□ -1.52
UBE4B-204ENST00000462658 STAB1Q9NY15 2570 aa5.53□□□□□ -1.52
UBE4B-204ENST00000462658 IGHV3-66A0A0C4DH42 116 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 H3BQ15 152 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 H3BTX0 84 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 MRPS12O15235 138 aaKnown RBP5.52□□□□□ -1.53
UBE4B-204ENST00000462658 APOHP02749 345 aaPredicted RBP5.52□□□□□ -1.53
UBE4B-204ENST00000462658 IGLC2P0DOY2 106 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 VPREB1P12018 145 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 RPL7P18124 248 aaKnown RBP5.52□□□□□ -1.53
UBE4B-204ENST00000462658 RANP62826 216 aaKnown RBP5.52□□□□□ -1.53
UBE4B-204ENST00000462658 C1orf194Q5T5A4 169 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 Q6ZTC4 211 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 C4orf3Q8WVX3 66 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 TMEM190Q8WZ59 177 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 GPR82Q96P67 336 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 NKX6-2Q9C056 277 aaPredicted RBP5.52□□□□□ -1.53
UBE4B-204ENST00000462658 ZNF586Q9NXT0 402 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 TENM1Q9UKZ4 2725 aa5.52□□□□□ -1.53
UBE4B-204ENST00000462658 TRBV19A0A075B6N1 114 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 IGHV3OR16-13A0A075B7E8 117 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 A0A087WW49 117 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 IGHV3-49A0A0A0MS15 119 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 IGHV3-74A0A0B4J1X5 117 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 PGPA6NDG6 321 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 GGTLC3B5MD39 225 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 K7EMT4 169 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 CD28P10747 220 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 GALR1P47211 349 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 GUCA2BQ16661 112 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 ZNF674Q2M3X9 581 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 C16orf54Q6UWD8 224 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 SVBPQ8N300 66 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 RPUSD4Q96CM3 377 aaKnown RBP5.51□□□□□ -1.53
UBE4B-204ENST00000462658 Q9H3A6 140 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 UFC1Q9Y3C8 167 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 SMAD5-AS1Q9Y6J3 95 aa5.51□□□□□ -1.53
UBE4B-204ENST00000462658 IGHV7-4-1A0A0J9YVY3 117 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 ZNF727A8MUV8 499 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 LINC01619G3V211 115 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 SLC25A5P05141 298 aaKnown RBP5.5□□□□□ -1.53
UBE4B-204ENST00000462658 MYCNOSP40205 109 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 SYNJ2BPP57105 145 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 PDE6HQ13956 83 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 FAM74A3Q4VXF1 159 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 LYPD1Q8N2G4 141 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 KLHL30-AS1Q8NEE0 82 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 OR11H1Q8NG94 326 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 OR1N2Q8NGR9 330 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 C11orf52Q96A22 123 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 TVP23CQ96ET8 276 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 SMIM7Q9BQ49 75 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 NIPSNAP3BQ9BS92 247 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 PARLQ9H300 379 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 DAZ1Q9NQZ3 744 aaKnown RBP5.5□□□□□ -1.53
UBE4B-204ENST00000462658 OTORQ9NRC9 128 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 SMPXQ9UHP9 88 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 EPDR1Q9UM22 224 aa5.5□□□□□ -1.53
UBE4B-204ENST00000462658 TSSC4Q9Y5U2 329 aaPredicted RBP5.5□□□□□ -1.53
UBE4B-204ENST00000462658 A0A087X0K7 114 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 A0A1B0GUS0 222 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 HELTA6NFD8 242 aa5.49□□□□□ -1.53
UBE4B-204ENST00000462658 M0R036 132 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms