RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 TRAV8-7A0A075B6U6 113 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 CRYM-AS1A6NIL9 109 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 ZNF727A8MUV8 499 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 FCGR3BO75015 233 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 DHRS3O75911 302 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 NDUFA3O95167 84 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 TRGV3P03979 118 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 PFN1P07737 140 aaKnown RBP3.78□□□□□ -1.8
SPTA1-202ENST00000461624 H2BFMP0C1H6 154 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 MYOD1P15172 320 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 HIST1H1DP16402 221 aaKnown RBP3.78□□□□□ -1.8
SPTA1-202ENST00000461624 BCL3P20749 454 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 FUT3P21217 361 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 FCGR2BP31994 310 aaPredicted RBP3.78□□□□□ -1.8
SPTA1-202ENST00000461624 APOC4P55056 127 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 OR4A47Q6IF82 309 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 FAM71F2Q6NXP2 309 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 ZNF343Q6P1L6 599 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 Q8IYB0 196 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 CMTM1Q8IZ96 169 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 TMEM61Q8N0U2 210 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 FAM58AQ8N1B3 248 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 LYPD1Q8N2G4 141 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 ZNF439Q8NDP4 499 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 NPBQ8NG41 125 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 OR6N2Q8NGY6 317 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 OTOSQ8NHW6 89 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 MARCH1Q8TCQ1 289 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 MBD3L1Q8WWY6 194 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 IL22RA2Q969J5 263 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 TMEM230Q96A57 120 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 ATP5SQ99766 215 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 TPPP3Q9BW30 176 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 CST9LQ9H4G1 147 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 ZNF430Q9H8G1 570 aaPredicted RBP3.78□□□□□ -1.8
SPTA1-202ENST00000461624 TIMM9Q9Y5J7 89 aa3.78□□□□□ -1.8
SPTA1-202ENST00000461624 IGKV1-12A0A0C4DH73 117 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 C2orf70A6NJV1 201 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 TMEM14DPA8MWL7 114 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 PRR32B1ATL7 298 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 FAM90A26D6RGX4 464 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 BMPR1BO00238 502 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 FCN1O00602 326 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 NBR2O15453 112 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 YPEL1O60688 119 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 SRSF10O75494 262 aaKnown RBP3.77□□□□□ -1.81
SPTA1-202ENST00000461624 S1PR2O95136 353 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 KRASP01116 189 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 IGKV1D-12P01611 117 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 TTRP02766 147 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 STAG3L3P0CL85 134 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 SLC25A6P12236 298 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 S100GP29377 79 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 SSTR5P35346 364 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 PPP1CCP36873 323 aaKnown RBP3.77□□□□□ -1.81
SPTA1-202ENST00000461624 PSMB3P49720 205 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 FUT6P51993 359 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 BRWD1-AS2P59051 145 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 YPEL3P61236 119 aaPredicted RBP3.77□□□□□ -1.81
SPTA1-202ENST00000461624 HBG1P69891 147 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 HBG2P69892 147 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 CX3CL1P78423 397 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 Q0VG73 95 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 GAGE5Q13069 117 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 GAGE6Q13070 117 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 VAMP3Q15836 100 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 ANKRD55Q3KP44 614 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 OR10J3Q5JRS4 329 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 PSMG4Q5JS54 123 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 Q6ZN92 141 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 SPATA12Q7Z6I5 190 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 NIT1Q86X76 327 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 CHST4Q8NCG5 386 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 ADAD2Q8NCV1 583 aaKnown RBP3.77□□□□□ -1.81
SPTA1-202ENST00000461624 OR5D14Q8NGL3 314 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 OR4S2Q8NH73 311 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 RFESDQ8TAC1 157 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 MRGPRFQ96AM1 343 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 GPR146Q96CH1 333 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 C10orf35Q96D05 121 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 YPEL2Q96QA6 119 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 SMIM7Q9BQ49 75 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 PMCHL2Q9BQD1 86 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 TMEM59Q9BXS4 323 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 NAA60Q9H7X0 242 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 TECRQ9NZ01 308 aaKnown RBP3.77□□□□□ -1.81
SPTA1-202ENST00000461624 PEF1Q9UBV8 284 aaKnown RBP3.77□□□□□ -1.81
SPTA1-202ENST00000461624 LSM5Q9Y4Y9 91 aaKnown RBP3.77□□□□□ -1.81
SPTA1-202ENST00000461624 R4GMQ9 66 aa3.77□□□□□ -1.81
SPTA1-202ENST00000461624 MUC2Q02817 5179 aa3.76□□□□□ -1.81
SPTA1-202ENST00000461624 SERTM2A0A1B0GWG4 89 aa3.76□□□□□ -1.81
SPTA1-202ENST00000461624 LOC107986453A0A1B0GWG9 222 aa3.76□□□□□ -1.81
SPTA1-202ENST00000461624 MEIS3P1A6NDR6 274 aa3.76□□□□□ -1.81
SPTA1-202ENST00000461624 C15orf62A8K5M9 175 aa3.76□□□□□ -1.81
SPTA1-202ENST00000461624 C15orf65H3BRN8 121 aa3.76□□□□□ -1.81
SPTA1-202ENST00000461624 H3BUA1 57 aa3.76□□□□□ -1.81
SPTA1-202ENST00000461624 CORTO00230 105 aa3.76□□□□□ -1.81
SPTA1-202ENST00000461624 DEFB4AO15263 64 aa3.76□□□□□ -1.81
SPTA1-202ENST00000461624 CCL25O15444 150 aa3.76□□□□□ -1.81
SPTA1-202ENST00000461624 RBFOX2O43251 390 aaKnown RBP eCLIP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms