RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ZFHX3Q15911 3703 aa15.47■□□□□ 0.07
CCM2-203ENST00000461377 AMTP48728 403 aa15.46■□□□□ 0.07
CCM2-203ENST00000461377 CLEC5AQ9NY25 188 aa15.46■□□□□ 0.07
CCM2-203ENST00000461377 LOC102724200A0A096LPH7 203 aaPredicted RBP15.45■□□□□ 0.06
CCM2-203ENST00000461377 SRSF2Q01130 221 aaKnown RBP15.45■□□□□ 0.06
CCM2-203ENST00000461377 NPFFR1Q9GZQ6 430 aa15.45■□□□□ 0.06
CCM2-203ENST00000461377 ZMAT5Q9UDW3 170 aaKnown RBP15.45■□□□□ 0.06
CCM2-203ENST00000461377 PMCHP20382 165 aa15.45■□□□□ 0.06
CCM2-203ENST00000461377 RPS20P60866 119 aaKnown RBP15.45■□□□□ 0.06
CCM2-203ENST00000461377 TMSB15BA0A087X1C1 80 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 TSTD3H0UI37 97 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 CD33P20138 364 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 PSMB8P28062 276 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 Q6YL49 198 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 KRTAP1-3Q8IUG1 177 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 ZNF664Q8N3J9 261 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 BORCS7Q96B45 105 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 Q96MF0 132 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 AGPAT4-IT1Q9H0P7 198 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 PRO1933Q9H354 126 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 NRN1Q9NPD7 142 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 VPREB3Q9UKI3 123 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 LYZL1Q6UWQ5 148 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 C16orf92Q96LL3 132 aa15.44■□□□□ 0.06
CCM2-203ENST00000461377 CR1P17927 2039 aa15.43■□□□□ 0.06
CCM2-203ENST00000461377 TMEM89A2RUT3 159 aa15.43■□□□□ 0.06
CCM2-203ENST00000461377 IL17RELQ6ZVW7 336 aa15.43■□□□□ 0.06
CCM2-203ENST00000461377 GPHB5Q86YW7 130 aa15.43■□□□□ 0.06
CCM2-203ENST00000461377 TPPP3Q9BW30 176 aa15.43■□□□□ 0.06
CCM2-203ENST00000461377 RNF114Q9Y508 228 aa15.43■□□□□ 0.06
CCM2-203ENST00000461377 POLQO75417 2590 aa15.43■□□□□ 0.06
CCM2-203ENST00000461377 PRSS57Q6UWY2 283 aa15.42■□□□□ 0.06
CCM2-203ENST00000461377 NIT1Q86X76 327 aa15.42■□□□□ 0.06
CCM2-203ENST00000461377 PSMG3-AS1Q96PY0 264 aa15.42■□□□□ 0.06
CCM2-203ENST00000461377 PEF1Q9UBV8 284 aaKnown RBP15.42■□□□□ 0.06
CCM2-203ENST00000461377 MAP1AP78559 2803 aaPredicted RBP15.42■□□□□ 0.06
CCM2-203ENST00000461377 FABP5P3A8MUU1 101 aa15.42■□□□□ 0.06
CCM2-203ENST00000461377 ZNF138P52744 262 aa15.42■□□□□ 0.06
CCM2-203ENST00000461377 ZNF493Q6ZR52 646 aa15.42■□□□□ 0.06
CCM2-203ENST00000461377 C9orf47Q6ZRZ4 202 aa15.42■□□□□ 0.06
CCM2-203ENST00000461377 ZNF575Q86XF7 245 aa15.42■□□□□ 0.06
CCM2-203ENST00000461377 FAM19A2Q8N3H0 131 aa15.42■□□□□ 0.06
CCM2-203ENST00000461377 CSMD2Q7Z408 3487 aa15.41■□□□□ 0.06
CCM2-203ENST00000461377 SOCS3O14543 225 aa15.41■□□□□ 0.06
CCM2-203ENST00000461377 CTRLP40313 264 aa15.41■□□□□ 0.06
CCM2-203ENST00000461377 TMEM78Q5T7P6 136 aa15.41■□□□□ 0.06
CCM2-203ENST00000461377 URB1-AS1Q96HZ7 61 aa15.41■□□□□ 0.06
CCM2-203ENST00000461377 C20orf173Q96LM9 149 aa15.41■□□□□ 0.06
CCM2-203ENST00000461377 PPP1R14DQ9NXH3 145 aa15.41■□□□□ 0.06
CCM2-203ENST00000461377 IGHV7-4-1A0A0J9YVY3 117 aa15.4■□□□□ 0.06
CCM2-203ENST00000461377 IGLC6P0CF74 106 aa15.4■□□□□ 0.06
CCM2-203ENST00000461377 PTPN13Q12923 2485 aa15.4■□□□□ 0.06
CCM2-203ENST00000461377 USP9YO00507 2555 aaPredicted RBP15.4■□□□□ 0.06
CCM2-203ENST00000461377 HSBP1O75506 76 aa15.4■□□□□ 0.06
CCM2-203ENST00000461377 ZNF705DP0CH99 300 aaPredicted RBP15.4■□□□□ 0.06
CCM2-203ENST00000461377 ZNF705BP0CI00 300 aaPredicted RBP15.4■□□□□ 0.06
CCM2-203ENST00000461377 LINC01559Q495D7 138 aa15.4■□□□□ 0.06
CCM2-203ENST00000461377 RNASEKQ6P5S7 137 aaKnown RBP15.4■□□□□ 0.06
CCM2-203ENST00000461377 NTF3P20783 257 aa15.39■□□□□ 0.05
CCM2-203ENST00000461377 CYB5R2Q6BCY4 276 aa15.39■□□□□ 0.05
CCM2-203ENST00000461377 C10orf99Q6UWK7 81 aa15.39■□□□□ 0.05
CCM2-203ENST00000461377 FER1L6-AS1Q8NA97 138 aa15.39■□□□□ 0.05
CCM2-203ENST00000461377 DAZ1Q9NQZ3 744 aaKnown RBP15.39■□□□□ 0.05
CCM2-203ENST00000461377 CSPG4Q6UVK1 2322 aa15.39■□□□□ 0.05
CCM2-203ENST00000461377 ORM1P02763 201 aa15.38■□□□□ 0.05
CCM2-203ENST00000461377 DDTP30046 118 aa15.38■□□□□ 0.05
CCM2-203ENST00000461377 TM4SF20Q53R12 229 aa15.38■□□□□ 0.05
CCM2-203ENST00000461377 K7EMT4 169 aa15.38■□□□□ 0.05
CCM2-203ENST00000461377 KRTDAPP60985 99 aa15.38■□□□□ 0.05
CCM2-203ENST00000461377 TEX43Q6ZNM6 134 aa15.38■□□□□ 0.05
CCM2-203ENST00000461377 Q8N976 141 aa15.38■□□□□ 0.05
CCM2-203ENST00000461377 RHPN1-AS1Q9BWJ2 59 aa15.38■□□□□ 0.05
CCM2-203ENST00000461377 TMEM213A2RRL7 107 aa15.37■□□□□ 0.05
CCM2-203ENST00000461377 HIST1H1AQ02539 215 aaPredicted RBP15.37■□□□□ 0.05
CCM2-203ENST00000461377 ZNF738Q8NE65 137 aa15.37■□□□□ 0.05
CCM2-203ENST00000461377 CHCHD1Q96BP2 118 aaKnown RBP15.37■□□□□ 0.05
CCM2-203ENST00000461377 ZNF702PQ9H963 129 aa15.37■□□□□ 0.05
CCM2-203ENST00000461377 SMPXQ9UHP9 88 aa15.37■□□□□ 0.05
CCM2-203ENST00000461377 PRRC2AP48634 2157 aaKnown RBP15.37■□□□□ 0.05
CCM2-203ENST00000461377 HOXA3O43365 443 aaPredicted RBP15.36■□□□□ 0.05
CCM2-203ENST00000461377 FAM106AQ4KMX7 169 aa15.36■□□□□ 0.05
CCM2-203ENST00000461377 CENPEQ02224 2701 aa15.36■□□□□ 0.05
CCM2-203ENST00000461377 M0R2Z0 102 aa15.36■□□□□ 0.05
CCM2-203ENST00000461377 LENEPQ9Y5L5 61 aa15.36■□□□□ 0.05
CCM2-203ENST00000461377 M0QZ24 198 aa15.35■□□□□ 0.05
CCM2-203ENST00000461377 C3orf79P0CE67 100 aa15.35■□□□□ 0.05
CCM2-203ENST00000461377 DMRTA1Q5VZB9 504 aa15.35■□□□□ 0.05
CCM2-203ENST00000461377 NAV2Q8IVL1 2488 aa15.35■□□□□ 0.05
CCM2-203ENST00000461377 KIR2DL5BA0A0G2JN68 375 aa15.35■□□□□ 0.05
CCM2-203ENST00000461377 KIR2DL5BA0A0G2JPC4 375 aa15.35■□□□□ 0.05
CCM2-203ENST00000461377 OVOL1O14753 267 aa15.35■□□□□ 0.05
CCM2-203ENST00000461377 KIR2DL5AQ8N109 375 aa15.35■□□□□ 0.05
CCM2-203ENST00000461377 CNFNQ9BYD5 112 aa15.35■□□□□ 0.05
CCM2-203ENST00000461377 RPLP1P05386 114 aaKnown RBP15.34■□□□□ 0.05
CCM2-203ENST00000461377 FOXE3Q13461 319 aa15.34■□□□□ 0.05
CCM2-203ENST00000461377 FAM104BQ5XKR9 115 aa15.34■□□□□ 0.05
CCM2-203ENST00000461377 MYOZ3Q8TDC0 251 aa15.34■□□□□ 0.05
CCM2-203ENST00000461377 C11orf21Q9P2W6 132 aa15.34■□□□□ 0.05
CCM2-203ENST00000461377 IGKV3D-20A0A0C4DH25 116 aa15.33■□□□□ 0.05
CCM2-203ENST00000461377 FAM181BA6NEQ2 426 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms