RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 FUT9Q9Y231 359 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 ZFP30Q9Y2G7 519 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 TNRC6BQ9UPQ9 1833 aaKnown RBP1.81□□□□□ -2.12
HPS3-203ENST00000460822 LAMA1P25391 3075 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 TRANK1O15050 2925 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 ZNF407Q9C0G0 2248 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 TMED7-TICAM2A0A0A6YYA0 188 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 IGHV3-21A0A0B4J1V1 117 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 IGKV1-9A0A0C4DH69 117 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 ZNF850A8MQ14 1090 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 ZNF705FA8MVS1 300 aaPredicted RBP1.81□□□□□ -2.12
HPS3-203ENST00000460822 H7BYZ3 331 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 SSSCA1O60232 199 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 YPEL1O60688 119 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 CST7O76096 145 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 CDS2O95674 445 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 ZNF705DP0CH99 300 aaPredicted RBP1.81□□□□□ -2.12
HPS3-203ENST00000460822 ZNF705BP0CI00 300 aaPredicted RBP1.81□□□□□ -2.12
HPS3-203ENST00000460822 ZNF728P0DKX0 622 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 ESDP10768 282 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 CCL1P22362 96 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 BLVRBP30043 206 aaPredicted RBP1.81□□□□□ -2.12
HPS3-203ENST00000460822 TAS2R30P59541 319 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 FXYD4P59646 89 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 HIST1H3AP68431 136 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 PSG4Q00888 419 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 EIF3IQ13347 325 aaKnown RBP1.81□□□□□ -2.12
HPS3-203ENST00000460822 KISS1Q15726 138 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 ADIRFQ15847 76 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 TOMM20LQ6UXN7 152 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 C6orf201Q7Z4U5 140 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 DEFB125Q8N687 156 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 SPANXA2-OT1Q8N9U9 137 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 OR8B12Q8NGG6 310 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 YPEL2Q96QA6 119 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 TP53RKQ96S44 253 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 IMMP2LQ96T52 175 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 GPER1Q99527 375 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 SMIM7Q9BQ49 75 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 MIEN1Q9BRT3 115 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 NAT8Q9UHE5 227 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 PKIGQ9Y2B9 76 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 WDFY3Q8IZQ1 3526 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 MED12Q93074 2177 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 ESPL1Q14674 2120 aa1.81□□□□□ -2.12
HPS3-203ENST00000460822 CHD9Q3L8U1 2897 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 KNL1Q8NG31 2342 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 A0A0J9YY10 115 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 MAP1LC3B2A6NCE7 125 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 OR6C6A6NF89 314 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 CEBPZOSA8MTT3 80 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 C15orf65H3BRN8 121 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 K7EP13 123 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 K7ERS5 55 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 M0R381 172 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 CCL25O15444 150 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 NUPR1O60356 82 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 FSTL3O95633 263 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 LHBP01229 141 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 IFNA1P01562 189 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 FGF6P10767 208 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 SRP14P37108 136 aaKnown RBP1.8□□□□□ -2.12
HPS3-203ENST00000460822 RPL19P84098 196 aaKnown RBP1.8□□□□□ -2.12
HPS3-203ENST00000460822 MEF2BQ02080 365 aaPredicted RBP1.8□□□□□ -2.12
HPS3-203ENST00000460822 ZNF816Q0VGE8 651 aaPredicted RBP1.8□□□□□ -2.12
HPS3-203ENST00000460822 ENDOGQ14249 297 aaKnown RBP1.8□□□□□ -2.12
HPS3-203ENST00000460822 CST6Q15828 149 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 DEFB110Q30KQ9 67 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 TDRG1Q3Y452 100 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 COL5A1-AS1Q5SY13 56 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 LCN15Q6UWW0 184 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 GRINAQ7Z429 371 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 AMN1Q8IY45 258 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 TMEM105Q8N8V8 129 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 FER1L6-AS1Q8NA97 138 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 OR2T10Q8NGZ9 312 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 CCL4L1Q8NHW4 92 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 MBD3L1Q8WWY6 194 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 C11orf40Q8WZ69 217 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 BTF3L4Q96K17 158 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 SPIN2AQ99865 258 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 B9D2Q9BPU9 175 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 SPIN2BQ9BPZ2 258 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 MAP1LC3BQ9GZQ8 125 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 TMEM222Q9H0R3 208 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 ZNF286AQ9HBT8 521 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 PRTFDC1Q9NRG1 225 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 RPRMQ9NS64 109 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 TMEM106BQ9NUM4 274 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 MED29Q9NX70 200 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 ZNF586Q9NXT0 402 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 VPREB3Q9UKI3 123 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 WASHC3Q9Y3C0 194 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 LHFPL6Q9Y693 200 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 PXMP4Q9Y6I8 212 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 CEP192Q8TEP8 1941 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 CFAP54Q96N23 3096 aa1.8□□□□□ -2.12
HPS3-203ENST00000460822 IGHV3OR15-7A0A075B7D8 119 aa1.79□□□□□ -2.12
HPS3-203ENST00000460822 IGKV1-12A0A0C4DH73 117 aa1.79□□□□□ -2.12
HPS3-203ENST00000460822 C3orf85A0A1B0GTC6 90 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms