RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 GNPNAT1Q96EK6 184 aaPredicted RBP11.73□□□□□ -0.53
SMARCD3-204ENST00000460431 VGLL1Q99990 258 aa11.73□□□□□ -0.53
SMARCD3-204ENST00000460431 NIPSNAP3BQ9BS92 247 aa11.73□□□□□ -0.53
SMARCD3-204ENST00000460431 SH3BGRL3Q9H299 93 aa11.73□□□□□ -0.53
SMARCD3-204ENST00000460431 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
SMARCD3-204ENST00000460431 DEFB131BA0A096LNP1 70 aa11.72□□□□□ -0.53
SMARCD3-204ENST00000460431 PLAC8L1A1L4L8 177 aa11.72□□□□□ -0.53
SMARCD3-204ENST00000460431 SMLR1H3BR10 107 aa11.72□□□□□ -0.53
SMARCD3-204ENST00000460431 TAAR5O14804 337 aa11.72□□□□□ -0.53
SMARCD3-204ENST00000460431 ARPC5O15511 151 aa11.72□□□□□ -0.53
SMARCD3-204ENST00000460431 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
SMARCD3-204ENST00000460431 CDC34P49427 236 aaPredicted RBP11.72□□□□□ -0.53
SMARCD3-204ENST00000460431 RAB24Q969Q5 203 aa11.72□□□□□ -0.53
SMARCD3-204ENST00000460431 PLA2G2EQ9NZK7 142 aa11.72□□□□□ -0.53
SMARCD3-204ENST00000460431 RBAKDNA6NC62 111 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 KLLNB2CW77 178 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 J3KRW8 73 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 HMGB3O15347 200 aaKnown RBP11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 LY6G6CO95867 125 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 SLC25A5P05141 298 aaKnown RBP11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 NMBP08949 121 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 STAG3L2P0CL84 134 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 STAG3L3P0CL85 134 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 HTN1P15515 57 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 CRISP2P16562 243 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 CSN1S1P47710 185 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 TMEM78Q5T7P6 136 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 ZNF493Q6ZR52 646 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 RXFP4Q8TDU9 374 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 OTORQ9NRC9 128 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 ZNF492Q9P255 531 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 APLNQ9ULZ1 77 aa11.71□□□□□ -0.53
SMARCD3-204ENST00000460431 TRAV12-3A0A0B4J271 114 aa11.7□□□□□ -0.54
SMARCD3-204ENST00000460431 LYRM9A8MSI8 78 aa11.7□□□□□ -0.54
SMARCD3-204ENST00000460431 ARL14EPLP0DKL9 152 aa11.7□□□□□ -0.54
SMARCD3-204ENST00000460431 LGALS9CQ6DKI2 356 aa11.7□□□□□ -0.54
SMARCD3-204ENST00000460431 C16orf74Q96GX8 76 aa11.7□□□□□ -0.54
SMARCD3-204ENST00000460431 CYTL1Q9NRR1 136 aa11.7□□□□□ -0.54
SMARCD3-204ENST00000460431 IGHV4-4A0A075B6R2 117 aa11.69□□□□□ -0.54
SMARCD3-204ENST00000460431 TRBV7-9A0A0J9YWB2 115 aa11.69□□□□□ -0.54
SMARCD3-204ENST00000460431 C7orf71A4D174 169 aa11.69□□□□□ -0.54
SMARCD3-204ENST00000460431 PGPA6NDG6 321 aa11.69□□□□□ -0.54
SMARCD3-204ENST00000460431 DIRC3C9JPN6 131 aa11.69□□□□□ -0.54
SMARCD3-204ENST00000460431 ZNF324O75467 553 aaPredicted RBP11.69□□□□□ -0.54
SMARCD3-204ENST00000460431 ZNF138P52744 262 aa11.69□□□□□ -0.54
SMARCD3-204ENST00000460431 SUN5Q8TC36 379 aa11.69□□□□□ -0.54
SMARCD3-204ENST00000460431 RNASE8Q8TDE3 154 aaKnown RBP11.69□□□□□ -0.54
SMARCD3-204ENST00000460431 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
SMARCD3-204ENST00000460431 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
SMARCD3-204ENST00000460431 HMSDA8MTL9 139 aa11.68□□□□□ -0.54
SMARCD3-204ENST00000460431 DAD1P61803 113 aa11.68□□□□□ -0.54
SMARCD3-204ENST00000460431 CD300CQ08708 224 aa11.68□□□□□ -0.54
SMARCD3-204ENST00000460431 FAM74A1Q5RGS3 127 aa11.68□□□□□ -0.54
SMARCD3-204ENST00000460431 ZFAND2AQ8N6M9 145 aa11.68□□□□□ -0.54
SMARCD3-204ENST00000460431 ARL6IP6Q8N6S5 226 aa11.68□□□□□ -0.54
SMARCD3-204ENST00000460431 OR11H4Q8NGC9 324 aa11.68□□□□□ -0.54
SMARCD3-204ENST00000460431 HYLS1Q96M11 299 aa11.68□□□□□ -0.54
SMARCD3-204ENST00000460431 PYGO2Q9BRQ0 406 aa11.68□□□□□ -0.54
SMARCD3-204ENST00000460431 TIMM8BQ9Y5J9 83 aaPredicted RBP11.68□□□□□ -0.54
SMARCD3-204ENST00000460431 GPX1P07203 203 aa11.67□□□□□ -0.54
SMARCD3-204ENST00000460431 GCHFRP30047 84 aa11.67□□□□□ -0.54
SMARCD3-204ENST00000460431 RNASE4P34096 147 aaKnown RBP11.67□□□□□ -0.54
SMARCD3-204ENST00000460431 BTN1A1Q13410 526 aa11.67□□□□□ -0.54
SMARCD3-204ENST00000460431 ZNF345Q14585 488 aa11.67□□□□□ -0.54
SMARCD3-204ENST00000460431 CCDC28AQ8IWP9 274 aa11.67□□□□□ -0.54
SMARCD3-204ENST00000460431 KCNRGQ8N5I3 272 aa11.67□□□□□ -0.54
SMARCD3-204ENST00000460431 CMTM2Q8TAZ6 248 aa11.67□□□□□ -0.54
SMARCD3-204ENST00000460431 CXorf1O96002 111 aa11.66□□□□□ -0.54
SMARCD3-204ENST00000460431 Q8TAT8 98 aa11.66□□□□□ -0.54
SMARCD3-204ENST00000460431 TMED6Q8WW62 240 aa11.66□□□□□ -0.54
SMARCD3-204ENST00000460431 FAM210BQ96KR6 192 aa11.66□□□□□ -0.54
SMARCD3-204ENST00000460431 LINC00467Q9BRT7 94 aa11.66□□□□□ -0.54
SMARCD3-204ENST00000460431 DEFB130BP0DP73 79 aa11.65□□□□□ -0.54
SMARCD3-204ENST00000460431 DEFB130AP0DP74 79 aa11.65□□□□□ -0.54
SMARCD3-204ENST00000460431 ZNF726P1Q15940 193 aa11.65□□□□□ -0.54
SMARCD3-204ENST00000460431 PRR9Q5T870 116 aa11.65□□□□□ -0.54
SMARCD3-204ENST00000460431 SSX7Q7RTT5 188 aa11.65□□□□□ -0.54
SMARCD3-204ENST00000460431 ST6GAL2Q96JF0 529 aa11.65□□□□□ -0.54
SMARCD3-204ENST00000460431 ARPC5LQ9BPX5 153 aa11.65□□□□□ -0.54
SMARCD3-204ENST00000460431 NDUFAF3Q9BU61 184 aa11.65□□□□□ -0.54
SMARCD3-204ENST00000460431 NOP10Q9NPE3 64 aaKnown RBP11.65□□□□□ -0.54
SMARCD3-204ENST00000460431 TMEM167BQ9NRX6 74 aa11.65□□□□□ -0.54
SMARCD3-204ENST00000460431 LENEPQ9Y5L5 61 aa11.65□□□□□ -0.54
SMARCD3-204ENST00000460431 A0A0D9SG52 128 aa11.64□□□□□ -0.55
SMARCD3-204ENST00000460431 CTXND1A0A1B0GTU2 59 aa11.64□□□□□ -0.55
SMARCD3-204ENST00000460431 AKR1C8PQ5T2L2 129 aa11.64□□□□□ -0.55
SMARCD3-204ENST00000460431 KMT2AQ03164 3969 aa11.63□□□□□ -0.55
SMARCD3-204ENST00000460431 CBY3A6NI87 242 aa11.63□□□□□ -0.55
SMARCD3-204ENST00000460431 HTN3P15516 51 aa11.63□□□□□ -0.55
SMARCD3-204ENST00000460431 ANXA2RQ3ZCQ2 193 aa11.63□□□□□ -0.55
SMARCD3-204ENST00000460431 Q6ZNX1 250 aa11.63□□□□□ -0.55
SMARCD3-204ENST00000460431 GOLT1AQ6ZVE7 132 aa11.63□□□□□ -0.55
SMARCD3-204ENST00000460431 RPH3ALQ9UNE2 315 aa11.63□□□□□ -0.55
SMARCD3-204ENST00000460431 SNURFLB1AK76 121 aa11.62□□□□□ -0.55
SMARCD3-204ENST00000460431 GNG5P63218 68 aa11.62□□□□□ -0.55
SMARCD3-204ENST00000460431 DAZ2Q13117 558 aaKnown RBP11.62□□□□□ -0.55
SMARCD3-204ENST00000460431 Q6ZQT7 251 aa11.62□□□□□ -0.55
SMARCD3-204ENST00000460431 EIF4E3Q8N5X7 224 aaKnown RBP11.62□□□□□ -0.55
SMARCD3-204ENST00000460431 LINC00612Q8N6U2 182 aa11.62□□□□□ -0.55
SMARCD3-204ENST00000460431 C5orf17Q8NAS9 161 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms