RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 RAB13P51153 203 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 LSM6P62312 80 aaKnown RBP1.15□□□□□ -2.23
RFC4-211ENST00000460408 KCNJ8Q15842 424 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 PLPPR5Q32ZL2 321 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 C10orf67Q8IYJ2 551 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 OR52R1Q8NGF1 315 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 HAVCR2Q8TDQ0 301 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 DGCR14Q96DF8 476 aaKnown RBP1.15□□□□□ -2.23
RFC4-211ENST00000460408 OR4C12Q96R67 309 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 PRRT1Q99946 306 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 TIMM21Q9BVV7 248 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 TMEM222Q9H0R3 208 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 PARVBQ9HBI1 364 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 C19orf12Q9NSK7 152 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 TAAR3PQ9P1P4 343 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 POLR3HQ9Y535 204 aaPredicted RBP1.15□□□□□ -2.23
RFC4-211ENST00000460408 DSPPQ9NZW4 1301 aa1.15□□□□□ -2.23
RFC4-211ENST00000460408 IGLV3-32A0A0A0MS00 114 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 A0A0A6YYH2 397 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 A6NJ64 397 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 SMIM23A6NLE4 172 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 ZNF705FA8MVS1 300 aaPredicted RBP1.14□□□□□ -2.23
RFC4-211ENST00000460408 BHLHE40O14503 412 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 PFDN6O15212 129 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 APOMO95445 188 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 CRYZL1O95825 349 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 TCRBP04435 133 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 TYMSP04818 313 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 RPS17P08708 135 aaKnown RBP1.14□□□□□ -2.23
RFC4-211ENST00000460408 UCHL1P09936 223 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 NBEAP1P0C6P0 100 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 DDTP30046 118 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 SERPINB1P30740 379 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 RPL27AP46776 148 aaKnown RBP1.14□□□□□ -2.23
RFC4-211ENST00000460408 RAP1GDS1P52306 607 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 NKX2-5P52952 324 aaPredicted RBP1.14□□□□□ -2.23
RFC4-211ENST00000460408 PSME3P61289 254 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 ARF6P62330 175 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 MLLT11Q13015 90 aaPredicted RBP1.14□□□□□ -2.23
RFC4-211ENST00000460408 PPP1R1AQ13522 171 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 UAP1Q16222 522 aaPredicted RBP1.14□□□□□ -2.23
RFC4-211ENST00000460408 IMPG1Q17R60 797 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 SLC36A2Q495M3 483 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 PABPC1L2AQ5JQF8 200 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 C3orf33Q6P1S2 294 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 TNFAIP8L2Q6P589 184 aaPredicted RBP1.14□□□□□ -2.23
RFC4-211ENST00000460408 S100A7AQ86SG5 101 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 LYG2Q86SG7 212 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 LHFPL1Q86WI0 220 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 LRRC28Q86X40 367 aaPredicted RBP1.14□□□□□ -2.23
RFC4-211ENST00000460408 C11orf40Q8WZ69 217 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 KIFC1Q9BW19 673 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 TTTY13Q9BZ97 58 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 C6orf62Q9GZU0 229 aaPredicted RBP1.14□□□□□ -2.23
RFC4-211ENST00000460408 FAM107BQ9H098 131 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 DPH3P1Q9H4G8 78 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 ARMC1Q9NVT9 282 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 CMTM6Q9NX76 183 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 SMPXQ9UHP9 88 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 FAM32AQ9Y421 112 aaKnown RBP1.14□□□□□ -2.23
RFC4-211ENST00000460408 ASB4Q9Y574 426 aa1.14□□□□□ -2.23
RFC4-211ENST00000460408 LRP1Q07954 4544 aaKnown RBP1.13□□□□□ -2.23
RFC4-211ENST00000460408 GNG14A0A1W2PPG7 69 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 EFCAB10A6NFE3 127 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 TMEM114B3SHH9 223 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 H0Y980 276 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 J3QQQ9 107 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 REG1AP05451 166 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 BPGMP07738 259 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 IL3P08700 152 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 MAGEA2P43356 314 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 OMPP47874 163 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 HINT1P49773 126 aaPredicted RBP1.13□□□□□ -2.23
RFC4-211ENST00000460408 RAB4BP61018 213 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 MYL5Q02045 173 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 TSNQ15631 228 aaKnown RBP1.13□□□□□ -2.23
RFC4-211ENST00000460408 ARHGAP11BQ3KRB8 267 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 KRTAP20-1Q3LI63 56 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 CCDC58Q4VC31 144 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 C1orf194Q5T5A4 169 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 OR10K2Q6IF99 312 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 SLC48A1Q6P1K1 146 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 C5orf46Q6UWT4 87 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 C4orf22Q6V702 233 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 IDO2Q6ZQW0 420 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 VMO1Q7Z5L0 202 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 LRRC18Q8N456 261 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 UBL4BQ8N7F7 174 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 OR5J2Q8NH18 312 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 LHFPL5Q8TAF8 219 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 PIGXQ8TBF5 258 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 ZNF675Q8TD23 568 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 NEK7Q8TDX7 302 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 DYDC1Q8WWB3 177 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 PYDC1Q8WXC3 89 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 TSPAN32Q96QS1 320 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 NMNAT3Q96T66 252 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 CCL13Q99616 98 aa1.13□□□□□ -2.23
RFC4-211ENST00000460408 HOPXQ9BPY8 73 aaPredicted RBP1.13□□□□□ -2.23
RFC4-211ENST00000460408 NABP2Q9BQ15 211 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms