RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
LMNB1-203ENST00000460265 ZFP36P26651 326 aaKnown RBP12.17□□□□□ -0.46
LMNB1-203ENST00000460265 PSG3Q16557 428 aa12.17□□□□□ -0.46
LMNB1-203ENST00000460265 FAM120AOSQ5T036 256 aa12.17□□□□□ -0.46
LMNB1-203ENST00000460265 WIPF2Q8TF74 440 aaPredicted RBP12.17□□□□□ -0.46
LMNB1-203ENST00000460265 DCHS2Q6V1P9 2916 aa12.16□□□□□ -0.46
LMNB1-203ENST00000460265 IGLV2-8P01709 118 aa12.16□□□□□ -0.46
LMNB1-203ENST00000460265 TCRAP04437 139 aa12.16□□□□□ -0.46
LMNB1-203ENST00000460265 TEX22C9J3V5 150 aa12.15□□□□□ -0.46
LMNB1-203ENST00000460265 HBBP68871 147 aa12.15□□□□□ -0.46
LMNB1-203ENST00000460265 OR8A1Q8NGG7 326 aa12.15□□□□□ -0.46
LMNB1-203ENST00000460265 CSMD1Q96PZ7 3565 aa12.15□□□□□ -0.46
LMNB1-203ENST00000460265 SVEP1Q4LDE5 3571 aa12.15□□□□□ -0.46
LMNB1-203ENST00000460265 FLNCQ14315 2725 aa12.15□□□□□ -0.46
LMNB1-203ENST00000460265 C8orf31Q8N9H6 132 aa12.15□□□□□ -0.46
LMNB1-203ENST00000460265 THAP8Q8NA92 274 aa12.15□□□□□ -0.46
LMNB1-203ENST00000460265 IGKV1-17P01599 117 aa12.14□□□□□ -0.47
LMNB1-203ENST00000460265 SMIM13P0DJ93 91 aa12.14□□□□□ -0.47
LMNB1-203ENST00000460265 DYNAPQ8N1N2 210 aa12.14□□□□□ -0.47
LMNB1-203ENST00000460265 GCSHP23434 173 aa12.14□□□□□ -0.47
LMNB1-203ENST00000460265 NMUP48645 174 aa12.14□□□□□ -0.47
LMNB1-203ENST00000460265 CLEC19AQ6UXS0 136 aa12.14□□□□□ -0.47
LMNB1-203ENST00000460265 G3V318 75 aa12.13□□□□□ -0.47
LMNB1-203ENST00000460265 SAA4P35542 130 aa12.13□□□□□ -0.47
LMNB1-203ENST00000460265 RPP21Q9H633 154 aaKnown RBP12.13□□□□□ -0.47
LMNB1-203ENST00000460265 A0A1W2PPR1 153 aa12.13□□□□□ -0.47
LMNB1-203ENST00000460265 CLEC3BP05452 202 aa12.13□□□□□ -0.47
LMNB1-203ENST00000460265 ATP5J2P56134 94 aa12.13□□□□□ -0.47
LMNB1-203ENST00000460265 BCL6BQ8N143 479 aaPredicted RBP12.13□□□□□ -0.47
LMNB1-203ENST00000460265 MRAP2Q96G30 205 aa12.13□□□□□ -0.47
LMNB1-203ENST00000460265 ORM1P02763 201 aa12.12□□□□□ -0.47
LMNB1-203ENST00000460265 ETDBQ3ZM63 59 aa12.12□□□□□ -0.47
LMNB1-203ENST00000460265 LOC389332A0A1B0GUA5 103 aa12.12□□□□□ -0.47
LMNB1-203ENST00000460265 EFNA4P52798 201 aa12.12□□□□□ -0.47
LMNB1-203ENST00000460265 C15orf32Q32M92 178 aa12.12□□□□□ -0.47
LMNB1-203ENST00000460265 K7EIM0 57 aa12.12□□□□□ -0.47
LMNB1-203ENST00000460265 I3L2K1 104 aa12.11□□□□□ -0.47
LMNB1-203ENST00000460265 WFDC2Q14508 124 aa12.11□□□□□ -0.47
LMNB1-203ENST00000460265 FBXL19-AS1Q494R0 122 aa12.11□□□□□ -0.47
LMNB1-203ENST00000460265 PRSS3P2Q8NHM4 247 aa12.11□□□□□ -0.47
LMNB1-203ENST00000460265 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.11□□□□□ -0.47
LMNB1-203ENST00000460265 C19orf84I3L1E1 186 aa12.11□□□□□ -0.47
LMNB1-203ENST00000460265 M0R1W7 72 aa12.11□□□□□ -0.47
LMNB1-203ENST00000460265 ZNF562Q6V9R5 426 aa12.11□□□□□ -0.47
LMNB1-203ENST00000460265 SH2D6Q7Z4S9 175 aa12.11□□□□□ -0.47
LMNB1-203ENST00000460265 Q8TAT8 98 aa12.11□□□□□ -0.47
LMNB1-203ENST00000460265 IGF2BP2-AS1Q96M15 143 aa12.11□□□□□ -0.47
LMNB1-203ENST00000460265 AP5S1Q9NUS5 200 aa12.11□□□□□ -0.47
LMNB1-203ENST00000460265 IGKV2-40A0A087WW87 121 aaPredicted RBP12.1□□□□□ -0.47
LMNB1-203ENST00000460265 IGKV2D-40P01614 121 aaPredicted RBP12.1□□□□□ -0.47
LMNB1-203ENST00000460265 NDPQ00604 133 aa12.1□□□□□ -0.47
LMNB1-203ENST00000460265 ATP5G2Q06055 141 aa12.1□□□□□ -0.47
LMNB1-203ENST00000460265 LINC01545Q5VT33 79 aa12.1□□□□□ -0.47
LMNB1-203ENST00000460265 FMC1Q96HJ9 113 aa12.1□□□□□ -0.47
LMNB1-203ENST00000460265 OTORQ9NRC9 128 aa12.1□□□□□ -0.47
LMNB1-203ENST00000460265 PSG8Q9UQ74 426 aa12.1□□□□□ -0.47
LMNB1-203ENST00000460265 TRAV40A0A0B4J280 105 aa12.1□□□□□ -0.47
LMNB1-203ENST00000460265 LINC00322Q6ZN03 302 aaPredicted RBP12.1□□□□□ -0.47
LMNB1-203ENST00000460265 ATP5L2Q7Z4Y8 100 aa12.1□□□□□ -0.47
LMNB1-203ENST00000460265 ZNF491Q8N8L2 437 aa12.1□□□□□ -0.47
LMNB1-203ENST00000460265 VGLL1Q99990 258 aa12.1□□□□□ -0.47
LMNB1-203ENST00000460265 IGHV3-11P01762 117 aa12.09□□□□□ -0.47
LMNB1-203ENST00000460265 APOHP02749 345 aaPredicted RBP12.09□□□□□ -0.47
LMNB1-203ENST00000460265 RNF5Q99942 180 aa12.09□□□□□ -0.47
LMNB1-203ENST00000460265 VWC2LB2RUY7 222 aa12.09□□□□□ -0.47
LMNB1-203ENST00000460265 MTURNQ8N3F0 131 aa12.09□□□□□ -0.47
LMNB1-203ENST00000460265 NCR2O95944 276 aa12.09□□□□□ -0.47
LMNB1-203ENST00000460265 OR11H6Q8NGC7 330 aa12.09□□□□□ -0.47
LMNB1-203ENST00000460265 OR4X2Q8NGF9 303 aa12.09□□□□□ -0.47
LMNB1-203ENST00000460265 NPIPB5A8MRT5 1133 aa12.08□□□□□ -0.48
LMNB1-203ENST00000460265 SMAD7O15105 426 aaKnown RBP12.08□□□□□ -0.48
LMNB1-203ENST00000460265 CRYGCP07315 174 aa12.08□□□□□ -0.48
LMNB1-203ENST00000460265 GP9P14770 177 aa12.08□□□□□ -0.48
LMNB1-203ENST00000460265 MBD6Q96DN6 1003 aa12.08□□□□□ -0.48
LMNB1-203ENST00000460265 SS18L2Q9UHA2 77 aa12.08□□□□□ -0.48
LMNB1-203ENST00000460265 RPL7P18124 248 aaKnown RBP12.08□□□□□ -0.48
LMNB1-203ENST00000460265 PPIFP30405 207 aaKnown RBP12.08□□□□□ -0.48
LMNB1-203ENST00000460265 MRGPRG-AS1Q2M3A8 158 aa12.08□□□□□ -0.48
LMNB1-203ENST00000460265 OR9G4Q8NGQ1 327 aa12.08□□□□□ -0.48
LMNB1-203ENST00000460265 CCL19Q99731 98 aa12.08□□□□□ -0.48
LMNB1-203ENST00000460265 ABCA2Q9BZC7 2435 aa12.08□□□□□ -0.48
LMNB1-203ENST00000460265 DOPEY1Q5JWR5 2465 aa12.08□□□□□ -0.48
LMNB1-203ENST00000460265 INS-IGF2F8WCM5 200 aa12.07□□□□□ -0.48
LMNB1-203ENST00000460265 HLA-DMBP28068 263 aa12.07□□□□□ -0.48
LMNB1-203ENST00000460265 PVRIGQ6DKI7 326 aa12.07□□□□□ -0.48
LMNB1-203ENST00000460265 SPAG8Q99932 426 aaPredicted RBP12.07□□□□□ -0.48
LMNB1-203ENST00000460265 SHANK2-AS3Q9BTD1 123 aa12.07□□□□□ -0.48
LMNB1-203ENST00000460265 ATP6V0E1O15342 81 aa12.07□□□□□ -0.48
LMNB1-203ENST00000460265 CRYGBP07316 175 aa12.07□□□□□ -0.48
LMNB1-203ENST00000460265 FAM231DQ6ZW35 169 aa12.07□□□□□ -0.48
LMNB1-203ENST00000460265 TCTEX1D4Q5JR98 221 aa12.07□□□□□ -0.48
LMNB1-203ENST00000460265 RBPMS2Q6ZRY4 209 aaKnown RBP12.07□□□□□ -0.48
LMNB1-203ENST00000460265 Q71RC1 249 aaPredicted RBP12.07□□□□□ -0.48
LMNB1-203ENST00000460265 TMEM189A5PLL7 270 aa12.06□□□□□ -0.48
LMNB1-203ENST00000460265 PF4V1P10720 104 aa12.06□□□□□ -0.48
LMNB1-203ENST00000460265 HOXB4P17483 251 aaPredicted RBP12.06□□□□□ -0.48
LMNB1-203ENST00000460265 MAPK1IP1LQ8NDC0 245 aa12.06□□□□□ -0.48
LMNB1-203ENST00000460265 NRGNQ92686 78 aa12.06□□□□□ -0.48
LMNB1-203ENST00000460265 NDFIP1Q9BT67 221 aa12.06□□□□□ -0.48
LMNB1-203ENST00000460265 ZNF747Q9BV97 191 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 769.2 ms